Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Linderina_20pennispora_20[genbank_20GCA_5F002104995.1_202017-04-20]
227 sequences; 26,202,545 total letters
Query= NC_028112.1
Length=178262
Score E
Sequences producing significant alignments: (Bits) Value
seq162 228 9e-55
seq160 205 1e-47
seq153 159 4e-34
seq151 152 6e-32
seq2 149 7e-31
seq155 131 2e-25
seq1 131 2e-25
seq217 122 1e-22
seq24 100 3e-16
seq210 93.3 5e-14
>seq162
Length=1352108
Score = 228 bits (252), Expect = 9e-55
Identities = 805/1241 (65%), Gaps = 31/1241 (2%)
Strand=Plus/Plus
Query 80356 AACTCTCCCGCGAGGGTGCGACGCAGATACAGGTTTGTAGTGTAAGGCTCAAATGCCTCG 80415
||||| || || ||| ||| ||| || | ||| | ||||| |||||||| ||||
Sbjct 1302970 AACTCGCCGGCCAGGACGCGGCGCGTGTAGATGTTGGACGTGTACGGCTCAAAGCACTCG 1303029
Query 80416 TTGTTTCCGAGGATCTGAGCCGTGCTCGCCGTCGGCATCGGGCCGACCAACAGTGAATTC 80475
||| ||||||||||| | || ||| || ||||| ||| | || | ||| || ||
Sbjct 1303030 TTGAAGCCGAGGATCTGCGATGTCGACGCTGTGGGCATGGGGGCCACAAGCAGCGAGTTG 1303089
Query 80476 CGCAGGCCGTGCTTCTTGATATCCTCGCGCAAATCTGACCAAAAATCAACC--CCAACGC 80533
|||| |||||||| | | | | || | | | || | || | || |||
Sbjct 1303090 CGCACGCCGTGCTCCCGCACCTTGGCCCGGAGCGC-GTCCCAGTCCCAGCGGTCCGACGG 1303148
Query 80534 TGTGAC--CCCACATGTCGTGCTGCAAGATGCCCTCCGACGCCGGAGACCCCGCGAACGT 80591
| || |||||| || |||||| |||||| |||| ||| ||| | ||||
Sbjct 1303149 CGCCACGCCCCACAGATCCGGCTGCAGCTTGCCCTTCGACATCGGGCTGCCCTGGTACGT 1303208
Query 80592 CTCGTACGGGCCCTC--CGTCTTGGCCAGCTCACACGACTCCATAAGGGCCGCGTGATAA 80649
|||||| | ||| | || | ||||||||||||||| || || ||||| || ||
Sbjct 1303209 CTCGTAGGCGCCGTGGACGGCC--GCCAGCTCACACGACGCCTCGAGCGCCGCATGGTAG 1303266
Query 80650 ATGCACTCAAAGACGCCCTTGTTCACACCGCGCGCCTGTGG--GTCGTCGAACGACAAGC 80707
||| ||| |||| | | ||||| |||| |||| || | | ||||||| || ||
Sbjct 1303267 ATGGTCTCGAAGATGGCGCGGTTCAGCTCGCGTGCCTCAGGCCGAC-TCGAACGGCATGC 1303325
Query 80708 CCATCATCATGAACACGTCAGCCAGGCCCTGAACGCCGATGGCGATCGGGCGGTGGCGCT 80767
||| | ||| | |||||||| |||||||| || ||| |||| || |||||||||
Sbjct 1303326 GCATGGCGAGGAAGGCATCAGCCAGCCCCTGAACTCCAATGCCGATGGGACGGTGGCGCA 1303385
Query 80768 TGTTCGATCGCTCG-GCCTCCGGAATTGGGTAAAAGTTATTATCGATGACGCGGTTCAGG 80826
|||| || || | ||| || | ||||| ||||| | ||||||| |||||||
Sbjct 1303386 TGTTGCTGCGGACGCGTCTCGGGCACCGGGTAGAAGTTGATGTCGATGATCTTGTTCAGG 1303445
Query 80827 TTGCGTGTAACAACCCGTGTAACATCATGAAGTTTCTGAAAGTCGAATTGGTTC--CC-- 80882
|| || || ||| || || || || || | ||| |||||| | | | || ||
Sbjct 1303446 TTCTTGGTGACCACCTTGGTGACGTCGTGCAGCTGCTGGAAGTCGTACTCGGTCGGCCGA 1303505
Query 80883 CTTCACAAATGCCGGAAGGCTCAGGGACGCCAGATTGCACAC-GGCCACCTCTTCAGCAT 80941
||| ||||| | ||| || | |||||||| |||||||| ||||||||| || |
Sbjct 1303506 CTTGACAAACGACGGCAGCGCAATCGACGCCAGGTTGCACACAGGCCACCTCGTCGGGGC 1303565
Query 80942 CTGTAAACTCGACGATTTCCGTGCACAAATTAGAAGACTTAATTGTACCCAGGTTTTTCT 81001
| |||||||||| || ||||||| || || |||| || || || ||||| | ||
Sbjct 1303566 TCGAGTACTCGACGATCTCTGTGCACAGGTTCGAGCACTTGATCGTGCCGAGGTTCTGCT 1303625
Query 81002 GGTTTGACTTGGCGTTGCAAGCGTCCTTGTAGCACATGTACGGGGTACCGGTCTCGACCT 81061
|||| |||||| |||||| || |||||||| |||| ||||| | || ||||||| ||
Sbjct 1303626 GGTTCGACTTGCGGTTGCATGCATCCTTGTACAGCATGAACGGGTTCCCCGTCTCGATCT 1303685
Query 81062 GTGACTTGAGGATGGCGTCCCAAATCTCGCGCGCCTTGACCACCTTGCGGAATTTGCCTT 81121
| | | ||||| || | ||| | || | || | || | ||| |||
Sbjct 1303686 GCGCGTCCAGGATCGCATACCACAGCTTCTGTGCGTCGATGGTCGAGCGCGCCAGGCC-- 1303743
Query 81122 CGGC-----CACATACTTGGCGTAAGCTTCGTCGAACTTGGCACCGTGAAGTTCAGTGAG 81176
||| | | ||||||| || | || |||| | || | || |
Sbjct 1303744 AGGCGTGTTCTCGTACTTGGTATACAGGGCCTCAAACTCATCGCCCCACACCTCCTGCAT 1303803
Query 81177 GTCTGGGCACTCGTTAGGGCACATCAGGTGCCAGTCGGTGTCGTTCTCTACAGCCTTCAT 81236
| | || ||||| ||||| | ||| ||| | | | || || ||||||
Sbjct 1303804 GCCGGGTGCCTCGTGCGGGCAGAACAGCGACCACTTGCCGCCGGCAATGACGCGCTTCAT 1303863
Query 81237 GAAAGCGTCAGGGATCCAGAGGGCGGTGAACAGGTCGCGGCAGCGCGCCTCCTCATCACC 81296
||| || |||||||| || || ||||||||||||| ||| ||||||| | ||
Sbjct 1303864 GAACAGATCCGGGATCCACAGCGCATAGAACAGGTCGCGGGCCCGCACCTCCTCCTTGCC 1303923
Query 81297 CTGGTTGAGGCGCAACTCGAGAAAGTCCATGATGTCCGCATGCCATGGCTCCAGATACAC 81356
||||| ||||| || || || | | | || |||||||| ||||||||||| |
Sbjct 1303924 GTGGTTCTTGCGCAGATCCAGGAACGCAAACACATCGGCATGCCACGGCTCCAGATAGAT 1303983
Query 81357 GGCGATCGACCCCTTGCGAC----GGCCACCCTGGTTGACGTAACGGGCAGTCGCGTTAA 81412
|| | || | ||| || | ||| ||||||| |||||| || || || ||| |
Sbjct 1303984 CGCAAACG-CACCTGGCCGCTTGTTGCCGCCCTGGTCGACGTACCGCGCCGTGTTGTTGA 1304042
Query 81413 ATACACGCAACATAGGGATGATACCATCTGACTGACCGTTCGTACCC-ACGATACGCGAC 81471
| ||||||| ||| || | | || | ||| ||||| || ||| | || ||
Sbjct 1304043 ACACACGCAGCATCGGCACAAGCCCGTTCGACGTGCCGTTGGTGCCCTGCAATGTATGAG 1304102
Query 81472 CCCTTGGCGCGCACCTTGCTGATTGAAAGACCGATGCCACCTGACCACTTTGAAATCTGA 81531
||| | || || | ||||| | || || ||||| || | ||| ||||||||
Sbjct 1304103 CCCGTAGCCCGGATGTTGCTCACGTGCAGCCCAATGCCGCCAGCGTTCTTGGAAATCTGC 1304162
Query 81532 GCACACCGGTTCATGGTCTCATAAATTCCCTCGATGCTATC 81572
|| ||| |||| || || || || ||||||||||| ||
Sbjct 1304163 GCGCACACCTTCAGCGTGTCGTAGATGCCCTCGATGCTGTC 1304203
Score = 107 bits (118), Expect = 2e-18
Identities = 117/153 (76%), Gaps = 2/153 (1%)
Strand=Plus/Plus
Query 80038 GTCCGCAGATAGTACATGCCCGTCTTGAGGCCCTTCTTCCAGCCGTACAGGTGCATAGAA 80097
|| ||||| ||||||||||| ||||| || ||||||||||||||||| | ||||| ||
Sbjct 1302649 GTGCGCAGGTAGTACATGCCGGTCTTCAGCCCCTTCTTCCAGCCGTAGAAATGCATCGAC 1302708
Query 80098 CTGAGCTTC-GCAAGTGTGGGGTTCTCCATGAAGATGTTCAGAGACTGAGACTGACAGAT 80156
| |||||| | ||| |||| |||||| ||||||||| ||||| ||| ||
Sbjct 1302709 GTCAGCTTCTGGTAGT-TGGGCCCGTCCATGTGGATGTTCAGCGACTGGCTCTGGTCAAT 1302767
Query 80157 GAAAGCCCCACGATCTGCCGCCATTTCAATAAT 80189
| | || |||||||| |||||||| ||||| ||
Sbjct 1302768 GTAGGCGCCACGATCCGCCGCCATGTCAATGAT 1302800
>seq160
Length=71855
Score = 205 bits (226), Expect = 1e-47
Identities = 472/701 (67%), Gaps = 20/701 (3%)
Strand=Plus/Plus
Query 80395 GTGTAAGGCTCAAATGCCTCGTTGTTTCCGAGGATCTGAGCCGTGCTCGCCGTCGGCATC 80454
||||| |||||||| ||||||| ||||||||||| | || ||| || |||||
Sbjct 70922 GTGTACGGCTCAAAGCACTCGTTGAAGCCGAGGATCTGCGATGTCGACGCTGTGGGCATG 70981
Query 80455 GGGCCGACCAACAGTGAATTCCGCAGGCCGTGCTTCTTGATATCCTCGCGCAAATCTGAC 80514
||| | || | ||| || || |||| |||||||| | | | | || | | | |
Sbjct 70982 GGGGCCACAAGCAGCGAGTTGCGCACGCCGTGCTCCCGCACCTTGGCCCGGAGCGC-GTC 71040
Query 80515 CAAAAATCAACC--CCAACGCTGTGAC--CCCACATGTCGTGCTGCAAGATGCCCTCCGA 80570
| | || | || ||| | || |||||| || |||||| |||||| |||
Sbjct 71041 CCAGTCCCAGCGGTCCGACGGCGCCACGCCCCACAGATCCGGCTGCAGCTTGCCCTTCGA 71100
Query 80571 CGCCGGAGACCCCGCGAACGTCTCGTACGGGCCCTC--CGTCTTGGCCAGCTCACACGAC 80628
| ||| ||| | |||||||||| | ||| | || | |||||||||||||||
Sbjct 71101 CATCGGGCTGCCCTGGTACGTCTCGTAGGCGCCGTGGACGGCC--GCCAGCTCACACGAC 71158
Query 80629 TCCATAAGGGCCGCGTGATAAATGCACTCAAAGACGCCCTTGTTCACACCGCGCGCCTGT 80688
|| || ||||| || || ||| ||| |||| | | ||||| |||| ||||
Sbjct 71159 GCCTCGAGCGCCGCATGGTAGATGGTCTCGAAGATGGCGCGGTTCAGCTCGCGTGCCTCA 71218
Query 80689 GGGTCGTCGAACGACAAGCCCATCATCATGAACACGTCAGCCAGGCCCTGAACGCCGATG 80748
| ||||||| || || ||| | ||| | |||||||| |||||||| || |||
Sbjct 71219 GCCGACTCGAACGGCATGCGCATGGCGAGGAAGGCATCAGCCAGCCCCTGAACTCCAATG 71278
Query 80749 GCGATCGGGCGGTGGCGCTTGTT----CGATCGCTCGGCCTCCGGAATTGGGTAAAAGTT 80804
|||| || |||| |||| |||| ||| ||| | ||| || | ||||| |||||
Sbjct 71279 CCGATGGGACGGT-GCGCATGTTGCTGCGA-CGC---GTCTCGGGCACCGGGTAGAAGTT 71333
Query 80805 ATTATCGATGACGCGGTTCAGGTTGCGTGTAACAACCCGTGTAACATCATGAAGTTTCTG 80864
| ||||||| ||||||||| || || ||| || || || || || | |||
Sbjct 71334 GATGTCGATGATCTTGTTCAGGTTCTTGGTGACCACCTTGGTGACGTCGTGCAGCTGCTG 71393
Query 80865 AAAGTCGAATTGGTTCCC--CTTCACAAATGCCGGAAGGCTCAGGGACGCCAGATTGCAC 80922
|||||| | | | || | ||| ||||| | ||| || | |||||||| ||||||
Sbjct 71394 GAAGTCGTACTCGGTCGCGACTTGACAAACGACGGCAGCGCAATCGACGCCAGGTTGCAC 71453
Query 80923 ACGGCCACCTCTTCAGCATCTGTAAACTCGACGATTTCCGTGCACAAATTAGAAGACTTA 80982
|| |||||||| || | | |||||||||| || ||||||| || || ||||
Sbjct 71454 ACAGCCACCTCGTCGGGGCTCGAGTACTCGACGATCTCTGTGCACAGGTTCGAGCACTTG 71513
Query 80983 ATTGTACCCAGGTTTTTCTGGTTTGACTTGGCGTTGCAAGCGTCCTTGTAGCACATGTAC 81042
|| || || ||||| | |||||| |||||| |||||| || |||||||| |||| ||
Sbjct 71514 ATCGTGCCGAGGTTCTGCTGGTTCGACTTGCGGTTGCATGCATCCTTGTACAGCATGAAC 71573
Query 81043 GGGGTACCGGTCTCGACCTGTGACTTGAGGATGGCGTCCCA 81083
||| | || ||||||| ||| | | ||||| || | |||
Sbjct 71574 GGGTTCCCCGTCTCGATCTGCGCGTCCAGGATCGCATACCA 71614
Score = 107 bits (118), Expect = 2e-18
Identities = 117/153 (76%), Gaps = 2/153 (1%)
Strand=Plus/Plus
Query 80038 GTCCGCAGATAGTACATGCCCGTCTTGAGGCCCTTCTTCCAGCCGTACAGGTGCATAGAA 80097
|| ||||| ||||||||||| ||||| || ||||||||||||||||| | ||||| ||
Sbjct 70563 GTGCGCAGGTAGTACATGCCGGTCTTCAGCCCCTTCTTCCAGCCGTAGAAATGCATCGAC 70622
Query 80098 CTGAGCTTC-GCAAGTGTGGGGTTCTCCATGAAGATGTTCAGAGACTGAGACTGACAGAT 80156
| |||||| | ||| |||| |||||| ||||||||| ||||| ||| ||
Sbjct 70623 GTCAGCTTCTGGTAGT-TGGGCCCGTCCATGTGGATGTTCAGCGACTGGCTCTGGTCAAT 70681
Query 80157 GAAAGCCCCACGATCTGCCGCCATTTCAATAAT 80189
| | || |||||||| |||||||| ||||| ||
Sbjct 70682 GTAGGCGCCACGATCCGCCGCCATGTCAATGAT 70714
>seq153
Length=77323
Score = 159 bits (176), Expect = 4e-34
Identities = 174/231 (75%), Gaps = 0/231 (0%)
Strand=Plus/Plus
Query 27402 TATAATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTC 27461
||| ||||| || ||||| ||||| || |||||||||||||| || |||||||| |||||
Sbjct 48048 TATCATGCAGATTTTTGTGAAGACCCTCACCGGCAAGACTATCACCCTTGAGGTGGAGTC 48107
Query 27462 AGGTGATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGA 27521
|| | ||| | || | ||| || |||||||||||||| || || || || ||
Sbjct 48108 GTCGGACACCATCGACAACGTCAAGCAGAAGATTCAGGACAAGGAAGGCATCCCGCCTGA 48167
Query 27522 CCAGCAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTA 27581
||||||||| || || || || || ||||| |||||||||| || ||||| | |||||
Sbjct 48168 CCAGCAGCGCCTCATCTTCGCCGGCAAGCAGCTCGAGGATGGCCGCACCCTCTCGGACTA 48227
Query 27582 TAATGTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632
|| |||| ||||| || ||||| || || || | || || ||||||||
Sbjct 48228 CAACATCCAGAAGGAGTCGACTCTGCACCTGGTGCTCCGCCTGCGCGGTGG 48278
Score = 143 bits (158), Expect = 3e-29
Identities = 168/227 (74%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465
||||| || || || ||||| || || ||||||||||| || || ||||| |||||
Sbjct 48280 ATGCAGATTTTCGTGAAGACCCTCACTGGCAAGACTATCACCCTCGAGGTGGAGTCGTCG 48339
Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525
|||| ||| | || | ||| || |||||||||||||| || || || || ||||||
Sbjct 48340 GATACCATCGACAACGTCAAGCAGAAGATTCAGGACAAGGAAGGCATCCCGCCTGACCAG 48399
Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585
||||| || || || || || ||||| |||||||| | || ||||| | ||||| ||
Sbjct 48400 CAGCGCCTCATCTTCGCCGGCAAGCAGCTCGAGGACGGCCGCACCCTCTCGGACTACAAC 48459
Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632
|||| ||||| || ||||| || || || | || || ||||||||
Sbjct 48460 ATCCAGAAGGAGTCGACTCTGCACCTGGTGCTCCGCCTGCGCGGTGG 48506
Score = 140 bits (154), Expect = 4e-28
Identities = 167/227 (74%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465
||||| || || || ||||| || |||||||||||||| || || ||||| |||||
Sbjct 48508 ATGCAGATTTTCGTGAAGACCCTCACCGGCAAGACTATCACCCTCGAGGTGGAGTCGTCG 48567
Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525
|| | ||||| || | ||| || |||||||||||||| || || || || ||||||
Sbjct 48568 GACACCATTGACAACGTCAAGCAGAAGATTCAGGACAAGGAAGGCATCCCGCCTGACCAG 48627
Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585
||||| || || || || || ||||| |||||||| | || || || | ||||| ||
Sbjct 48628 CAGCGCCTCATCTTCGCCGGCAAGCAGCTCGAGGACGGCCGCACTCTCTCGGACTACAAC 48687
Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632
|||| ||||| || ||||| || || || | || || ||||| ||
Sbjct 48688 ATCCAGAAGGAGTCGACTCTGCACCTGGTGCTTCGCCTGCGCGGCGG 48734
>seq151
Length=1709611
Score = 152 bits (168), Expect = 6e-32
Identities = 174/234 (74%), Gaps = 0/234 (0%)
Strand=Plus/Plus
Query 27399 TACTATAATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGA 27458
|||||| ||||| || || |||||||| ||||| |||||||| || || |||||||| ||
Sbjct 449551 TACTATCATGCAGATTTTCGTCAAGACCCTTACGGGCAAGACCATCACCCTTGAGGTGGA 449610
Query 27459 GTCAGGTGATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCC 27518
||| || | ||| | || | ||| || || |||||||||||||| ||||| ||
Sbjct 449611 GTCGTCGGACACCATCGACAACGTCAAGCAGAAGATCCAGGACAAGGAGGGCATTCCCCC 449670
Query 27519 AGACCAGCAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGA 27578
||||||||||| || || || || || ||||| |||||||| | || ||||| | ||
Sbjct 449671 TGACCAGCAGCGCCTCATCTTCGCCGGCAAGCAGCTCGAGGACGGCCGCACCCTTTCGGA 449730
Query 27579 CTATAATGTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632
||| || |||| ||||| || || || || || || | || || || |||||
Sbjct 449731 CTACAACATCCAGAAGGAGTCGACCCTGCACCTCGTGCTCCGCCTGCGTGGTGG 449784
>seq2
Length=801100
Score = 149 bits (164), Expect = 7e-31
Identities = 169/227 (74%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465
||||| || ||||| ||||| || |||||||||||||| || || ||||| |||||
Sbjct 378045 ATGCAGATTTTTGTGAAGACCCTCACCGGCAAGACTATCACCCTCGAGGTGGAGTCGTCG 378104
Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525
|| | ||| | || | ||| || ||||||||||||||||| || || || ||||||
Sbjct 378105 GACACCATCGACAACGTCAAGCAGAAGATTCAGGACAAGGAGGGCATCCCGCCTGACCAG 378164
Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585
||||| || || || || || ||||| |||||||| | || ||||| | ||||| ||
Sbjct 378165 CAGCGCCTCATCTTCGCCGGCAAGCAGCTCGAGGACGGCCGCACCCTCTCGGACTACAAC 378224
Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632
|||| ||||| || ||||| || | || | || || ||||||||
Sbjct 378225 ATCCAGAAGGAGTCGACTCTGCACTTGGTGCTTCGCCTGCGCGGTGG 378271
Score = 143 bits (158), Expect = 3e-29
Identities = 168/227 (74%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465
||||| || || || ||||| || |||||||||||||| || || ||||| |||||
Sbjct 378501 ATGCAGATTTTCGTGAAGACCCTCACCGGCAAGACTATCACCCTCGAGGTGGAGTCGTCG 378560
Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525
|| | ||| | || | ||| || ||||||||||||||||| || || || ||||||
Sbjct 378561 GACACCATCGACAACGTCAAGCAGAAGATTCAGGACAAGGAGGGCATCCCGCCTGACCAG 378620
Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585
||||| || || || || || ||||| |||||||| | || ||||| | ||||| ||
Sbjct 378621 CAGCGCCTCATCTTCGCCGGCAAGCAGCTCGAGGACGGCCGCACCCTCTCGGACTACAAC 378680
Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632
|||| ||||| || ||||| || || || | || || ||||| ||
Sbjct 378681 ATCCAGAAGGAGTCGACTCTGCACCTGGTGCTCCGCCTGCGCGGCGG 378727
Score = 140 bits (154), Expect = 4e-28
Identities = 167/227 (74%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465
||||| || || || ||||| || ||||||||||| || || || ||||| |||||
Sbjct 378273 ATGCAGATTTTCGTGAAGACCCTCACCGGCAAGACCATCACCCTCGAGGTGGAGTCGTCG 378332
Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525
|| | ||| | || | ||| || ||||||||||||||||| || || || ||||||
Sbjct 378333 GACACCATCGACAACGTCAAGCAGAAGATTCAGGACAAGGAGGGCATCCCGCCTGACCAG 378392
Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585
||||| || || || || || ||||| |||||||| | || ||||| | ||||| ||
Sbjct 378393 CAGCGCCTCATCTTCGCCGGCAAGCAGCTCGAGGACGGCCGCACCCTCTCGGACTACAAC 378452
Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632
|||| ||||| || ||||| || | || | || || ||||||||
Sbjct 378453 ATCCAGAAGGAGTCGACTCTGCACTTGGTGCTTCGCCTGCGCGGTGG 378499
>seq155
Length=76293
Score = 131 bits (144), Expect = 2e-25
Identities = 165/227 (73%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465
||||| || || || ||||| || || |||||||| || || || ||||| |||||
Sbjct 26706 ATGCAGATTTTCGTTAAGACCCTGACGGGCAAGACCATCACCCTCGAGGTGGAGTCTTCC 26765
Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525
|| | ||| | || | ||| || || |||||||||||||| || || || ||||||
Sbjct 26766 GACACCATCGATAACGTTAAGCAGAAGATCCAGGACAAGGAGGGTATCCCCCCTGACCAG 26825
Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585
||||| || || || || || ||||| |||||||| | || ||||| | ||||| ||
Sbjct 26826 CAGCGCCTGATCTTCGCCGGCAAGCAGCTCGAGGACGGCCGCACCCTTTCGGACTACAAC 26885
Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632
|||| ||||| || || ||||| || || | || || || |||||
Sbjct 26886 ATCCAGAAGGAGTCGACCCTTCACCTGGTGCTCCGCCTGCGTGGTGG 26932
>seq1
Length=3302357
Score = 131 bits (144), Expect = 2e-25
Identities = 165/227 (73%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465
||||| || || || ||||| || || |||||||| || || || ||||| |||||
Sbjct 871860 ATGCAGATTTTCGTTAAGACCCTGACGGGCAAGACCATCACCCTCGAGGTGGAGTCTTCC 871919
Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525
|| | ||| | || | ||| || || |||||||||||||| || || || ||||||
Sbjct 871920 GACACCATCGATAACGTTAAGCAGAAGATCCAGGACAAGGAGGGTATCCCCCCTGACCAG 871979
Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585
||||| || || || || || ||||| |||||||| | || ||||| | ||||| ||
Sbjct 871980 CAGCGCCTGATCTTCGCCGGCAAGCAGCTCGAGGACGGCCGCACCCTTTCGGACTACAAC 872039
Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632
|||| ||||| || || ||||| || || | || || || |||||
Sbjct 872040 ATCCAGAAGGAGTCGACCCTTCACCTGGTGCTCCGCCTGCGTGGTGG 872086
>seq217
Length=908848
Score = 122 bits (134), Expect = 1e-22
Identities = 375/576 (65%), Gaps = 8/576 (1%)
Strand=Plus/Minus
Query 64297 TTCCCAATTAGGTACCCTGATTTGTGGGAGCTTTACAAGAAAGCCATCGCAAGTTTCTGG 64356
||||| || | ||||| || | |||||| | |||||||| | || ||||||
Sbjct 400638 TTCCCGATCAAGTACCACGAGATCTGGGAGATGTACAAGAAGCACGAGGCGTCGTTCTGG 400579
Query 64357 ACGGTCGAGGAGGTTGATCTCGCCAAGGATCTCAGCGACTGGGAAAACC---TAAACTCA 64413
|||| |||||| | || || | |||| | || ||||||| |||| | |||
Sbjct 400578 ACGGCCGAGGAAATCGACCTGTCGCAGGACATGGGCCACTGGGACAACCGCCTGAACGAC 400519
Query 64414 CAGGAACAGCACTTCATCAAGTTGGTCCTAGCATTCTTCGCATCAAGTGACGGAATTGTG 64473
| || | ||||| ||||||| || || || ||||| || | ||||| || ||
Sbjct 400518 AACGAGCGTCACTTTATCAAGTACGTGCTCGCGTTCTTTGCTGCCTCGGACGGCATCGTC 400459
Query 64474 TTTGAGAATTTGGACCTAAATTTTACAAAGGATGTTCAGATCCCAGAGGCGCGGTCATTC 64533
||||| ||| | || |||| | || ||||||||||| ||||||||||| |||
Sbjct 400458 AACGAGAACCTGGTGCAGAACTTTAGCACCGAGGTTCAGATCCCCGAGGCGCGGTCGTTC 400399
Query 64534 TATGCGTATCAGGGATTTAACGAAAGTATTCATGGCGAGACGTATTCGCTCATGATTGAC 64593
|| | | ||| | | || | || || |||||||| ||||| | ||||||
Sbjct 400398 TACGGCTTCCAGATGATGATTGAGAACATCCACTCGGAGACGTACTCGCTGCTCATTGAC 400339
Query 64594 AAGTTTGTTCGGGATCCTGTCGAGAAGGATGGACTGTTCAGGGCTATAGAGACTGTACCC 64653
| || | || || || ||| || ||||| ||||| || | | |||
Sbjct 400338 ACGTACATCCGCGACCCCAAGGAGCGCGACTTTTTGTTCCACGCTATCGACAACAT-CCC 400280
Query 64654 GCTGTTACTAAA-AAGGCTGAATGGGCCATCCGGTGGATGAAT---CGTGGGTCGTCGTT 64709
| | | || ||||| || ||||| | || ||||| || || | | | |||
Sbjct 400279 GTGCATCCGCAAGAAGGCCGACTGGGCGCTTCGCTGGATCGATAACCGCGAGGCCAAGTT 400220
Query 64710 TGGTCAGCGTCTCGCAGCTTTTGCCTGTGTGGAAGGAATTTTCTTTTCTGGGTCATTCTG 64769
|| ||| || | || ||||| || || || || ||||| || || || ||
Sbjct 400219 CGGCGTGCGCCTGGTGGCCTTTGCGGCGGTCGAGGGCATCTTCTTCTCGGGCTCGTTTGC 400160
Query 64770 TTCTATTTTCTGGCTAAAAAAGCGGGGCCTGATGCCAGGTCTGTCGTTTTCGAACGAGCT 64829
|| || |||||||| || ||||| ||||||||||| || ||| | || |||||||||||
Sbjct 400159 GTCGATCTTCTGGCTCAAGAAGCGCGGCCTGATGCCTGGACTGACCTTCTCGAACGAGCT 400100
Query 64830 GATCTCTCGGGACGAGGGGCTCCACCAAGAATTTGC 64865
||||| || |||||||| || ||| || |||||
Sbjct 400099 GATCTGCCGCGACGAGGGCCTGCACACGGACTTTGC 400064
>seq24
Length=729003
Score = 100 bits (110), Expect = 3e-16
Identities = 271/406 (67%), Gaps = 14/406 (3%)
Strand=Plus/Plus
Query 31159 GAGCTCAAGAAAACAGATGGGTCCAAAAAGTCTCGAATTACGGGAATTCCGAAGCTCGAC 31218
|| |||||||| || || ||||| | || || ||||| ||| ||||||||
Sbjct 506831 GACCTCAAGAAGACCGACGGGTCGCGCACCAGCCGGATCACGGGCATTGACAAGCTCGAT 506890
Query 31219 GACGCCAACTGGGCCGGTAC--CCACAAGTCGCACGAGTGCACGCTTATTATTACCGAGG 31276
||||||||| ||| || || ||| ||| | ||||||||||| ||| | || ||||
Sbjct 506891 GACGCCAACATGGCTGGCACAGCCAAAAGCA--AGGAGTGCACGCTGATTCTGACTGAGG 506948
Query 31277 GTGACTCGGCAAAGGCGCTTGCTATTGCTGGCTTGAGTGTTGTGGGGCGCAATGCGTTCG 31336
| ||||| || |||||||| ||| | ||||| || | ||| ||| || | ||| |
Sbjct 506949 GAGACTCTGCCAAGGCGCTGGCTGTGGCTGGACTGGGCGTTCAGGGACGTGACAAGTTTG 507008
Query 31337 GGGTGTTTCCGCTCCGAGGCAAGCCGCGTAACGTTCGTGACGCCTCCGTTAAACAGGTTA 31396
|| | || |||| || || ||||||| || || || ||||| || | ||| |
Sbjct 507009 GGATTTTCACGCTGCGCGGAAAGCCGCTCAATGTGCGCGACGCGTCTGCCCGGCAGATCG 507068
Query 31397 CGGATAATGAAGAGTTTTCCAACCTGAAAAAGATCCTCGGGCTTCAGCATGG---CAAGG 31453
|| || ||||||| |||| | || |||| | || || | || || ||||
Sbjct 507069 GCGACAACCAAGAGTTCACCAATATCAAGCGGATCATGGGACTCAAACACGGCGCCAAG- 507127
Query 31454 TATATAATTCA-CTGAGAGAATTGCGGTACGGTCGCCTCATGATTATGACCGACGCAGAT 31512
||| ||| | || | |||| ||||||| | | || ||| |||| |||
Sbjct 507128 --TATTCGTCAGCCGA-CCAGCTGCGCTACGGTCATATTCTCATCATGGCCGATCAGGAT 507184
Query 31513 CTCGACGGCAGTCACATCAAGGGTCTTG-TCCTAAATATGTTCCAC 31557
|||| ||||| || |||||||| |||| | ||||| |||||| ||
Sbjct 507185 GTCGATGGCAGCCATATCAAGGG-CTTGCTTCTAAACATGTTCGAC 507229
>seq210
Length=39130
Score = 93.3 bits (102), Expect = 5e-14
Identities = 268/404 (66%), Gaps = 10/404 (2%)
Strand=Plus/Plus
Query 31159 GAGCTCAAGAAAACAGATGGGTCCAAAAAGTCTCGAATTACGGGAATTCCGAAGCTCGAC 31218
|| |||||||| || || ||||| | || || ||||| ||| ||||||||
Sbjct 29010 GACCTCAAGAAGACCGACGGGTCGCGCACCAGCCGGATCACGGGCATTGACAAGCTCGAT 29069
Query 31219 GACGCCAACTGGGCCGGTAC--CCACAAGTCGCACGAGTGCACGCTTATTATTACCGAGG 31276
||||||||| ||| || || ||| ||| | ||||||||||| ||| | || ||||
Sbjct 29070 GACGCCAACATGGCTGGCACAGCCAAAAGCA--AGGAGTGCACGCTGATTCTGACTGAGG 29127
Query 31277 GTGACTCGGCAAAGGCGCTTGCTATTGCTGGCTTGAGTGTTGTGGGGCGCAATGCGTTCG 31336
| || || || |||||||| ||| | ||||| || | ||| ||| || | ||| |
Sbjct 29128 GAGATTCTGCCAAGGCGCTGGCTGTGGCTGGACTGGGCGTTCAGGGACGTGACAAGTTTG 29187
Query 31337 GGGTGTTTCCGCTCCGAGGCAAGCCGCGTAACGTTCGTGACGCCTCCGTTAAACAGGTTA 31396
|| | || |||| || || ||||||| || || || ||||| || | ||| |
Sbjct 29188 GGATTTTCACGCTGCGCGGAAAGCCGCTCAATGTGCGCGACGCGTCTGCCCGGCAGATCG 29247
Query 31397 CGGATAATGAAGAGTTTTCCAACCTGAAAAAGATCCTCGGGCTTCAGCATG--GCAAGGT 31454
|| || ||||||| |||| | || |||| | || || | || | || | ||
Sbjct 29248 GCGACAACCAAGAGTTCACCAATATCAAGCGGATCATGGGACTCAAACACGGCGCCAAGT 29307
Query 31455 ATATAATTCACTGAGAGAATTGCGGTACGGTCGCCTCATGATTATGACCGACGCAGATCT 31514
|| | | | || | |||| ||||||| | | || ||| |||| ||| |
Sbjct 29308 AT-TCGTCGGCCGA-CCAGCTGCGCTACGGTCATATTCTCATCATGGCCGATCAGGATGT 29365
Query 31515 CGACGGCAGTCACATCAAGGGTCTTG-TCCTAAATATGTTCCAC 31557
||| ||||| || |||||||| |||| | ||||| |||||| ||
Sbjct 29366 CGATGGCAGCCATATCAAGGG-CTTGCTTCTAAACATGTTCGAC 29408
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 570308781744240
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |