Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Linderina_20pennispora_20[genbank_20GCA_5F002104995.1_202017-04-20] 227 sequences; 26,202,545 total letters Query= NC_030240.1 Length=128058 Score E Sequences producing significant alignments: (Bits) Value seq79 87.8 1e-12 >seq79 Length=276002 Score = 87.8 bits (96), Expect = 1e-12 Identities = 226/336 (67%), Gaps = 9/336 (3%) Strand=Plus/Minus Query 103177 GCTATGGCAATTATTCCACAGCCCAAACGGCCGCCCGAGTTTCCGGTAGTTTTGCTCAAC 103236 || ||| |||| | || ||| || || ||||| | ||| |||||||| || || | Sbjct 193300 GCAATGCCAATGACGCCGCAGGCCTGGCGACCGCCGGCGTTACCGGTAGTGATGGACAGC 193241 Query 103237 GGATGATCGGTGAGGCCCAAATCGTCTCTGTCCGTGTGCACGACCAAACTTCGGCCGATA 103296 ||| || ||||| |||||| ||| | ||||| || | | ||||||||| Sbjct 193240 TCATGGCCGCCCTTGCCCAGATCGTCCTCGTCGGCATGCACAACAATGGTGCGGCCGATA 193181 Query 103297 ATGTTGTACGGGCCGAACAGAAACGC-TACGCTGTCCGTCATATTGATTTCGGTCAGGGC 103355 | | ||| | ||| ||||| | | | || ||| | || | || | || || | | Sbjct 193180 ACGCTGTGCTCGCCAAACAGCGTCACCTGCGA-GTCGGAGATCTCGACCTTGGCCACGCC 193122 Query 103356 GTCGTAGCCCGCCGATTTGACGTTGCCCAAATCGCCAACGTGTCTGACG--AGCGCGTCG 103413 | | | ||| ||| ||||||||||| ||||| || || | | ||| ||||| Sbjct 193121 GGACTCGGACGC-GAT--GACGTTGCCCAGGTCGCCCACATGGCGCTCCTCAGC-CGTCG 193066 Query 103414 GGCGCGCCGTGCGTTTCGCCGGTGGGATTAAAATGTTCGCCGGCCGACGTGCAGCCGTTG 103473 | |||||||||||| | | || || || || ||| ||||||||||||||||| Sbjct 193065 G-CGCGCCGTGCGTCTTCTTGAACGGGTTGAAGTGCGGGCCCGCCGACGTGCAGCCGTTC 193007 Query 103474 CTTGTGTCGCCAAACTCGTGCACGTGAAAACCGTGC 103509 |||||||||||||||||||||| || |||||| Sbjct 193006 GAGTTGTCGCCAAACTCGTGCACGTGGAATCCGTGC 192971 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 409659666647793