Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Linderina_20pennispora_20[genbank_20GCA_5F002104995.1_202017-04-20] 227 sequences; 26,202,545 total letters Query= NC_031058.1 Length=58566 Score E Sequences producing significant alignments: (Bits) Value seq1 111 6e-20 >seq1 Length=3302357 Score = 111 bits (122), Expect = 6e-20 Identities = 168/239 (70%), Gaps = 0/239 (0%) Strand=Plus/Minus Query 31022 GCCTTAATGACCACACCGACGCCCTTGGCTTCCAGGTGCTCGAACAGTGCGTCCGCGATC 31081 |||| ||||| ||| ||||||||| | | |||| |||| || || | || ||| Sbjct 1305228 GCCTCCATGACAACAGCGACGCCCTGCGGCTGCAGGATCTCGCTGAGCGCAACTGCAATC 1305169 Query 31082 TGGTCTGTGAGCCGTTCCTGCACTTGCAGGCGGCGAGCATACATGTCCGCCAGGCGGGAC 31141 || | ||| || || ||||| || ||||| ||||| |||| || || | | || | Sbjct 1305168 TGCTTTGTCAGGCGCTCCTGGACCTGCAGACGGCGGCTGAACATCTCGGCTATCCTGGCC 1305109 Query 31142 AGCTTGCTCAGGCCCACGATACGACCGTTCGGAATGTAGCTGATCGTGACCGTGCCGAAG 31201 |||||||| || |||| | || | |||||| ||||| | || | ||| ||||| || Sbjct 1305108 AGCTTGCTAAGCCCCAGCACGCGGCGGTTCGGGATGTATCCAATTGACACCTTGCCGCAG 1305049 Query 31202 ATCGGCGCGAGGTGATGCTCGCAATGTGAGTAGATGGGGATGTCGCGCACCGTCACCAT 31260 | ||| | ||||| |||||||| | || ||||| |||||||||||| | ||||| Sbjct 1305048 AACGGAACCAGGTGGTGCTCGCAGAGCGAAAAGATGTCGATGTCGCGCACGATAACCAT 1304990 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 187289095137472