Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Linderina_20pennispora_20[genbank_20GCA_5F002104995.1_202017-04-20] 227 sequences; 26,202,545 total letters Query= NC_031761.1 Length=131855 Score E Sequences producing significant alignments: (Bits) Value seq79 82.4 6e-11 >seq79 Length=276002 Score = 82.4 bits (90), Expect = 6e-11 Identities = 105/142 (74%), Gaps = 2/142 (1%) Strand=Plus/Minus Query 107556 ACGTTGCCCAAATCGCCGACGTGACGCTCCGCGGC-GTCGGGCGCGCCATGCTGCTGATG 107614 |||||||||| ||||| || || |||||| | || ||||| |||||| ||| || | Sbjct 193105 ACGTTGCCCAGGTCGCCCACATGGCGCTCCTCAGCCGTCGG-CGCGCCGTGCGTCTTCTT 193047 Query 107615 CGTAGGATTAAAGTGTTCGCCTGCCGACGTGCACCCATTGCTTGTGTCGCCAAATTCGTG 107674 || || ||||| ||| ||||||||||| || || |||||||||| ||||| Sbjct 193046 GAACGGGTTGAAGTGCGGGCCCGCCGACGTGCAGCCGTTCGAGTTGTCGCCAAACTCGTG 192987 Query 107675 CACGTGAAAACCGTGCAAGCCG 107696 |||||| || |||||| |||| Sbjct 192986 CACGTGGAATCCGTGCTTGCCG 192965 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 421810033032952