Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Linderina_20pennispora_20[genbank_20GCA_5F002104995.1_202017-04-20] 227 sequences; 26,202,545 total letters Query= NC_032255.1 Length=112536 Score E Sequences producing significant alignments: (Bits) Value seq155 154 1e-32 seq1 154 1e-32 seq153 145 5e-30 seq2 140 2e-28 seq151 132 3e-26 >seq155 Length=76293 Score = 154 bits (170), Expect = 1e-32 Identities = 163/212 (77%), Gaps = 2/212 (1%) Strand=Plus/Minus Query 44128 CACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTC 44187 |||||||||||| || |||||| ||||||||||| || | || ||| |||| || Sbjct 26915 CACCAGGTGAAGGGTCGACTCCTTCTGGATGTTGTAGTCCGAAAGGGTGCGGCCGTCCTC 26856 Query 44188 CAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGT 44247 |||||||| ||||| ||||||| |||||||| || | || | ||| ||||| ||| Sbjct 26855 GAGCTGCTTGCCGGCGAAGATCAGGCGCTGCTGGTCAGGGGGGATACCCTCCTTGTCCTG 26796 Query 44248 TATCTTCTGCTTCAATGTT-CCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCT 44306 ||||||||||| || ||| | |||||||||| || |||||||| | || || |||| Sbjct 26795 GATCTTCTGCTT-AACGTTATCGATGGTGTCGGAAGACTCCACCTCGAGGGTGATGGTCT 26737 Query 44307 TTCCCGTGAGGGTCTTCACGAAGATTTGCATG 44338 | ||||| |||||||| ||||| || |||||| Sbjct 26736 TGCCCGTCAGGGTCTTAACGAAAATCTGCATG 26705 >seq1 Length=3302357 Score = 154 bits (170), Expect = 1e-32 Identities = 163/212 (77%), Gaps = 2/212 (1%) Strand=Plus/Minus Query 44128 CACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTC 44187 |||||||||||| || |||||| ||||||||||| || | || ||| |||| || Sbjct 872069 CACCAGGTGAAGGGTCGACTCCTTCTGGATGTTGTAGTCCGAAAGGGTGCGGCCGTCCTC 872010 Query 44188 CAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGT 44247 |||||||| ||||| ||||||| |||||||| || | || | ||| ||||| ||| Sbjct 872009 GAGCTGCTTGCCGGCGAAGATCAGGCGCTGCTGGTCAGGGGGGATACCCTCCTTGTCCTG 871950 Query 44248 TATCTTCTGCTTCAATGTT-CCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCT 44306 ||||||||||| || ||| | |||||||||| || |||||||| | || || |||| Sbjct 871949 GATCTTCTGCTT-AACGTTATCGATGGTGTCGGAAGACTCCACCTCGAGGGTGATGGTCT 871891 Query 44307 TTCCCGTGAGGGTCTTCACGAAGATTTGCATG 44338 | ||||| |||||||| ||||| || |||||| Sbjct 871890 TGCCCGTCAGGGTCTTAACGAAAATCTGCATG 871859 >seq153 Length=77323 Score = 145 bits (160), Expect = 5e-30 Identities = 158/210 (75%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 44128 CACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTC 44187 ||||||||| || || |||||| ||||||||||| || | ||| ||| |||| || Sbjct 48717 CACCAGGTGCAGAGTCGACTCCTTCTGGATGTTGTAGTCCGAGAGAGTGCGGCCGTCCTC 48658 Query 44188 CAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGT 44247 |||||||| ||||| ||||| | |||||||| || | || | |||||||| ||| Sbjct 48657 GAGCTGCTTGCCGGCGAAGATGAGGCGCTGCTGGTCAGGCGGGATGCCTTCCTTGTCCTG 48598 Query 44248 TATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTT 44307 ||||||||||| | | | |||||||| | || |||||||| | || || ||||| Sbjct 48597 AATCTTCTGCTTGACGTTGTCAATGGTGTCCGACGACTCCACCTCGAGGGTGATAGTCTT 48538 Query 44308 TCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 || ||||||||||||||||| || ||||| Sbjct 48537 GCCGGTGAGGGTCTTCACGAAAATCTGCAT 48508 Score = 143 bits (158), Expect = 2e-29 Identities = 172/234 (74%), Gaps = 0/234 (0%) Strand=Plus/Minus Query 44107 CATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATC 44166 ||| || || | ||| | | ||||||||| || || |||||| ||||||||||| || Sbjct 48282 CATACCACCGCGCAGGCGGAGCACCAGGTGCAGAGTCGACTCCTTCTGGATGTTGTAGTC 48223 Query 44167 GGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGA 44226 | ||| ||| | || || |||||||| ||||| ||||| | |||||||| || | Sbjct 48222 CGAGAGGGTGCGGCCATCCTCGAGCTGCTTGCCGGCGAAGATGAGGCGCTGCTGGTCAGG 48163 Query 44227 AGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTC 44286 || | |||||||| ||| ||||||||||| | | | |||||||| | || || Sbjct 48162 CGGGATGCCTTCCTTGTCCTGAATCTTCTGCTTGACGTTGTCGATGGTGTCCGACGACTC 48103 Query 44287 CACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCATGAT 44340 |||||| | || || ||||| || |||||||||||||| || || |||||||| Sbjct 48102 CACCTCAAGGGTGATAGTCTTGCCGGTGAGGGTCTTCACAAAAATCTGCATGAT 48049 Score = 141 bits (156), Expect = 7e-29 Identities = 170/231 (74%), Gaps = 0/231 (0%) Strand=Plus/Minus Query 44107 CATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATC 44166 ||| || || | ||| | | ||||||||| || || |||||| ||||||||||| || Sbjct 48510 CATACCACCGCGCAGGCGGAGCACCAGGTGCAGAGTCGACTCCTTCTGGATGTTGTAGTC 48451 Query 44167 GGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGA 44226 | ||| ||| |||| || |||||||| ||||| ||||| | |||||||| || | Sbjct 48450 CGAGAGGGTGCGGCCGTCCTCGAGCTGCTTGCCGGCGAAGATGAGGCGCTGCTGGTCAGG 48391 Query 44227 AGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTC 44286 || | |||||||| ||| ||||||||||| | | | ||||| || | || || Sbjct 48390 CGGGATGCCTTCCTTGTCCTGAATCTTCTGCTTGACGTTGTCGATGGTATCCGACGACTC 48331 Query 44287 CACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 |||||| | || || ||||| || ||||||||||||||||| || ||||| Sbjct 48330 CACCTCGAGGGTGATAGTCTTGCCAGTGAGGGTCTTCACGAAAATCTGCAT 48280 >seq2 Length=801100 Score = 140 bits (154), Expect = 2e-28 Identities = 157/210 (75%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 44128 CACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTC 44187 ||||||||| || || |||||| ||||||||||| || | ||| ||| |||| || Sbjct 378710 CACCAGGTGCAGAGTCGACTCCTTCTGGATGTTGTAGTCCGAGAGGGTGCGGCCGTCCTC 378651 Query 44188 CAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGT 44247 |||||||| ||||| ||||| | |||||||| || | || | || ||||| ||| Sbjct 378650 GAGCTGCTTGCCGGCGAAGATGAGGCGCTGCTGGTCAGGCGGGATGCCCTCCTTGTCCTG 378591 Query 44248 TATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTT 44307 ||||||||||| | | | |||||||| | || |||||||| | || || ||||| Sbjct 378590 AATCTTCTGCTTGACGTTGTCGATGGTGTCCGACGACTCCACCTCGAGGGTGATAGTCTT 378531 Query 44308 TCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 || ||||||||||||||||| || ||||| Sbjct 378530 GCCGGTGAGGGTCTTCACGAAAATCTGCAT 378501 Score = 138 bits (152), Expect = 8e-28 Identities = 169/231 (73%), Gaps = 0/231 (0%) Strand=Plus/Minus Query 44107 CATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATC 44166 ||| || || | ||| | | ||||| ||| || || |||||| ||||||||||| || Sbjct 378503 CATACCACCGCGCAGGCGAAGCACCAAGTGCAGAGTCGACTCCTTCTGGATGTTGTAGTC 378444 Query 44167 GGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGA 44226 | ||| ||| |||| || |||||||| ||||| ||||| | |||||||| || | Sbjct 378443 CGAGAGGGTGCGGCCGTCCTCGAGCTGCTTGCCGGCGAAGATGAGGCGCTGCTGGTCAGG 378384 Query 44227 AGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTC 44286 || | || ||||| ||| ||||||||||| | | | |||||||| | || || Sbjct 378383 CGGGATGCCCTCCTTGTCCTGAATCTTCTGCTTGACGTTGTCGATGGTGTCCGACGACTC 378324 Query 44287 CACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 |||||| | || || ||||| || ||||||||||||||||| || ||||| Sbjct 378323 CACCTCGAGGGTGATGGTCTTGCCGGTGAGGGTCTTCACGAAAATCTGCAT 378273 Score = 134 bits (148), Expect = 1e-26 Identities = 169/232 (73%), Gaps = 0/232 (0%) Strand=Plus/Minus Query 44107 CATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATC 44166 ||| || || | ||| | | ||||| ||| || || |||||| ||||||||||| || Sbjct 378275 CATACCACCGCGCAGGCGAAGCACCAAGTGCAGAGTCGACTCCTTCTGGATGTTGTAGTC 378216 Query 44167 GGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGA 44226 | ||| ||| |||| || |||||||| ||||| ||||| | |||||||| || | Sbjct 378215 CGAGAGGGTGCGGCCGTCCTCGAGCTGCTTGCCGGCGAAGATGAGGCGCTGCTGGTCAGG 378156 Query 44227 AGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTC 44286 || | || ||||| ||| ||||||||||| | | | |||||||| | || || Sbjct 378155 CGGGATGCCCTCCTTGTCCTGAATCTTCTGCTTGACGTTGTCGATGGTGTCCGACGACTC 378096 Query 44287 CACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCATG 44338 |||||| | || || ||||| || |||||||||||||| || || |||||| Sbjct 378095 CACCTCGAGGGTGATAGTCTTGCCGGTGAGGGTCTTCACAAAAATCTGCATG 378044 >seq151 Length=1709611 Score = 132 bits (146), Expect = 3e-26 Identities = 157/213 (74%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 44128 CACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTC 44187 ||| ||||| || || |||||| ||||||||||| || | || ||| |||| || Sbjct 449767 CACGAGGTGCAGGGTCGACTCCTTCTGGATGTTGTAGTCCGAAAGGGTGCGGCCGTCCTC 449708 Query 44188 CAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGT 44247 |||||||| ||||| ||||| | |||||||| || | || | || ||||| ||| Sbjct 449707 GAGCTGCTTGCCGGCGAAGATGAGGCGCTGCTGGTCAGGGGGAATGCCCTCCTTGTCCTG 449648 Query 44248 TATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTT 44307 ||||||||||| | | | |||||||| | || |||||||| | || || ||||| Sbjct 449647 GATCTTCTGCTTGACGTTGTCGATGGTGTCCGACGACTCCACCTCAAGGGTGATGGTCTT 449588 Query 44308 TCCCGTGAGGGTCTTCACGAAGATTTGCATGAT 44340 ||||| |||||||| ||||| || |||||||| Sbjct 449587 GCCCGTAAGGGTCTTGACGAAAATCTGCATGAT 449555 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 359989404064059