Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Linderina_20pennispora_20[genbank_20GCA_5F002104995.1_202017-04-20] 227 sequences; 26,202,545 total letters Query= NC_033780.1 Length=144510 Score E Sequences producing significant alignments: (Bits) Value seq151 178 1e-39 seq155 176 4e-39 seq2 176 4e-39 seq1 176 4e-39 seq153 167 2e-36 seq79 125 7e-24 >seq151 Length=1709611 Score = 178 bits (196), Expect = 1e-39 Identities = 182/235 (77%), Gaps = 2/235 (1%) Strand=Plus/Minus Query 41633 CCGCCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCG 41692 || || || || || || | ||| || ||||| || ||||||||| ||||| ||||| Sbjct 449787 CCACCACCACGCAGGCGGAGCACGAGGTGCAGGGTCGACTCCTTCTGGATGTTGTAGTCC 449728 Query 41693 GAGAGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCG 41752 || |||||||| |||| |||||||||||||||||||| || |||||||| ||||| | | Sbjct 449727 GAAAGGGTGCGGCCGTCCTCGAGCTGCTTGCCGGCGAAGATGAGGCGCTGCTGGTCAGGG 449668 Query 41753 GGAACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGAC-ACAGTGTCGCTCGACTC 41811 |||| || |||||||||| ||| || ||||| ||| | | | ||||| |||||| Sbjct 449667 GGAATGCCCTCCTTGTCCTGGATCTTCTGCTT-GACGTTGTCGATGGTGTCCGACGACTC 449609 Query 41812 CACCTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCATGTTA 41866 |||||| | || || || || ||||| || ||||| ||||||||||||||| || Sbjct 449608 CACCTCAAGGGTGATGGTCTTGCCCGTAAGGGTCTTGACGAAAATCTGCATGATA 449554 >seq155 Length=76293 Score = 176 bits (194), Expect = 4e-39 Identities = 178/229 (78%), Gaps = 2/229 (1%) Strand=Plus/Minus Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695 || || || || || | |||||| || || || ||||||||| ||||| ||||| || Sbjct 26932 CCACCACGCAGGCGGAGCACCAGGTGAAGGGTCGACTCCTTCTGGATGTTGTAGTCCGAA 26873 Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGA 41755 |||||||| |||| |||||||||||||||||||| ||||||||||| ||||| | ||| Sbjct 26872 AGGGTGCGGCCGTCCTCGAGCTGCTTGCCGGCGAAGATCAGGCGCTGCTGGTCAGGGGGG 26813 Query 41756 ACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGAC-ACAGTGTCGCTCGACTCCAC 41814 | | |||||||||| ||| || ||||| |||| | | |||||| |||||||| Sbjct 26812 ATACCCTCCTTGTCCTGGATCTTCTGCTT-AACGTTATCGATGGTGTCGGAAGACTCCAC 26754 Query 41815 CTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCATG 41863 ||| | || || || || |||||||| ||||| ||||||||||||||| Sbjct 26753 CTCGAGGGTGATGGTCTTGCCCGTCAGGGTCTTAACGAAAATCTGCATG 26705 >seq2 Length=801100 Score = 176 bits (194), Expect = 4e-39 Identities = 178/229 (78%), Gaps = 2/229 (1%) Strand=Plus/Minus Query 41635 GCCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGA 41694 ||||||||| || || | |||||| ||||| || ||||||||| ||||| ||||| || Sbjct 378728 GCCGCCGCGCAGGCGGAGCACCAGGTGCAGAGTCGACTCCTTCTGGATGTTGTAGTCCGA 378669 Query 41695 GAGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGG 41754 ||||||||| |||| |||||||||||||||||||| || |||||||| ||||| | || Sbjct 378668 GAGGGTGCGGCCGTCCTCGAGCTGCTTGCCGGCGAAGATGAGGCGCTGCTGGTCAGGCGG 378609 Query 41755 AACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGAC-ACAGTGTCGCTCGACTCCA 41813 | || |||||||||| || || ||||| ||| | | | ||||| |||||||| Sbjct 378608 GATGCCCTCCTTGTCCTGAATCTTCTGCTT-GACGTTGTCGATGGTGTCCGACGACTCCA 378550 Query 41814 CCTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCAT 41862 |||| | || || || || || || || ||||| |||||||||||||| Sbjct 378549 CCTCGAGGGTGATAGTCTTGCCGGTGAGGGTCTTCACGAAAATCTGCAT 378501 Score = 165 bits (182), Expect = 8e-36 Identities = 175/228 (77%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695 || ||||| || || | ||||| ||||| || ||||||||| ||||| ||||| ||| Sbjct 378499 CCACCGCGCAGGCGAAGCACCAAGTGCAGAGTCGACTCCTTCTGGATGTTGTAGTCCGAG 378440 Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGA 41755 |||||||| |||| |||||||||||||||||||| || |||||||| ||||| | || Sbjct 378439 AGGGTGCGGCCGTCCTCGAGCTGCTTGCCGGCGAAGATGAGGCGCTGCTGGTCAGGCGGG 378380 Query 41756 ACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGAC-ACAGTGTCGCTCGACTCCAC 41814 | || |||||||||| || || ||||| ||| | | | ||||| ||||||||| Sbjct 378379 ATGCCCTCCTTGTCCTGAATCTTCTGCTT-GACGTTGTCGATGGTGTCCGACGACTCCAC 378321 Query 41815 CTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCAT 41862 ||| | || || || || || || || ||||| |||||||||||||| Sbjct 378320 CTCGAGGGTGATGGTCTTGCCGGTGAGGGTCTTCACGAAAATCTGCAT 378273 Score = 163 bits (180), Expect = 3e-35 Identities = 177/232 (76%), Gaps = 2/232 (1%) Strand=Plus/Minus Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695 || ||||| || || | ||||| ||||| || ||||||||| ||||| ||||| ||| Sbjct 378271 CCACCGCGCAGGCGAAGCACCAAGTGCAGAGTCGACTCCTTCTGGATGTTGTAGTCCGAG 378212 Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGA 41755 |||||||| |||| |||||||||||||||||||| || |||||||| ||||| | || Sbjct 378211 AGGGTGCGGCCGTCCTCGAGCTGCTTGCCGGCGAAGATGAGGCGCTGCTGGTCAGGCGGG 378152 Query 41756 ACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGAC-ACAGTGTCGCTCGACTCCAC 41814 | || |||||||||| || || ||||| ||| | | | ||||| ||||||||| Sbjct 378151 ATGCCCTCCTTGTCCTGAATCTTCTGCTT-GACGTTGTCGATGGTGTCCGACGACTCCAC 378093 Query 41815 CTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCATGTTA 41866 ||| | || || || || || || || ||||| || |||||||||||| || Sbjct 378092 CTCGAGGGTGATAGTCTTGCCGGTGAGGGTCTTCACAAAAATCTGCATGGTA 378041 >seq1 Length=3302357 Score = 176 bits (194), Expect = 4e-39 Identities = 178/229 (78%), Gaps = 2/229 (1%) Strand=Plus/Minus Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695 || || || || || | |||||| || || || ||||||||| ||||| ||||| || Sbjct 872086 CCACCACGCAGGCGGAGCACCAGGTGAAGGGTCGACTCCTTCTGGATGTTGTAGTCCGAA 872027 Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGA 41755 |||||||| |||| |||||||||||||||||||| ||||||||||| ||||| | ||| Sbjct 872026 AGGGTGCGGCCGTCCTCGAGCTGCTTGCCGGCGAAGATCAGGCGCTGCTGGTCAGGGGGG 871967 Query 41756 ACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGAC-ACAGTGTCGCTCGACTCCAC 41814 | | |||||||||| ||| || ||||| |||| | | |||||| |||||||| Sbjct 871966 ATACCCTCCTTGTCCTGGATCTTCTGCTT-AACGTTATCGATGGTGTCGGAAGACTCCAC 871908 Query 41815 CTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCATG 41863 ||| | || || || || |||||||| ||||| ||||||||||||||| Sbjct 871907 CTCGAGGGTGATGGTCTTGCCCGTCAGGGTCTTAACGAAAATCTGCATG 871859 >seq153 Length=77323 Score = 167 bits (184), Expect = 2e-36 Identities = 176/229 (77%), Gaps = 2/229 (1%) Strand=Plus/Minus Query 41635 GCCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGA 41694 ||||||||| || || | |||||| ||||| || ||||||||| ||||| ||||| || Sbjct 48735 GCCGCCGCGCAGGCGAAGCACCAGGTGCAGAGTCGACTCCTTCTGGATGTTGTAGTCCGA 48676 Query 41695 GAGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGG 41754 ||| ||||| |||| |||||||||||||||||||| || |||||||| ||||| | || Sbjct 48675 GAGAGTGCGGCCGTCCTCGAGCTGCTTGCCGGCGAAGATGAGGCGCTGCTGGTCAGGCGG 48616 Query 41755 AACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGAC-ACAGTGTCGCTCGACTCCA 41813 | || ||||||||| || || ||||| ||| | | | ||||| |||||||| Sbjct 48615 GATGCCTTCCTTGTCCTGAATCTTCTGCTT-GACGTTGTCAATGGTGTCCGACGACTCCA 48557 Query 41814 CCTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCAT 41862 |||| | || || || || || || || ||||| |||||||||||||| Sbjct 48556 CCTCGAGGGTGATAGTCTTGCCGGTGAGGGTCTTCACGAAAATCTGCAT 48508 Score = 161 bits (178), Expect = 9e-35 Identities = 174/228 (76%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695 || ||||| || || | |||||| ||||| || ||||||||| ||||| ||||| ||| Sbjct 48506 CCACCGCGCAGGCGGAGCACCAGGTGCAGAGTCGACTCCTTCTGGATGTTGTAGTCCGAG 48447 Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGA 41755 |||||||| |||| |||||||||||||||||||| || |||||||| ||||| | || Sbjct 48446 AGGGTGCGGCCGTCCTCGAGCTGCTTGCCGGCGAAGATGAGGCGCTGCTGGTCAGGCGGG 48387 Query 41756 ACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGAC-ACAGTGTCGCTCGACTCCAC 41814 | || ||||||||| || || ||||| ||| | | | || || ||||||||| Sbjct 48386 ATGCCTTCCTTGTCCTGAATCTTCTGCTT-GACGTTGTCGATGGTATCCGACGACTCCAC 48328 Query 41815 CTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCAT 41862 ||| | || || || || || || || ||||| |||||||||||||| Sbjct 48327 CTCGAGGGTGATAGTCTTGCCAGTGAGGGTCTTCACGAAAATCTGCAT 48280 Score = 159 bits (176), Expect = 3e-34 Identities = 176/232 (76%), Gaps = 2/232 (1%) Strand=Plus/Minus Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695 || ||||| || || | |||||| ||||| || ||||||||| ||||| ||||| ||| Sbjct 48278 CCACCGCGCAGGCGGAGCACCAGGTGCAGAGTCGACTCCTTCTGGATGTTGTAGTCCGAG 48219 Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGA 41755 |||||||| | || |||||||||||||||||||| || |||||||| ||||| | || Sbjct 48218 AGGGTGCGGCCATCCTCGAGCTGCTTGCCGGCGAAGATGAGGCGCTGCTGGTCAGGCGGG 48159 Query 41756 ACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGAC-ACAGTGTCGCTCGACTCCAC 41814 | || ||||||||| || || ||||| ||| | | | ||||| ||||||||| Sbjct 48158 ATGCCTTCCTTGTCCTGAATCTTCTGCTT-GACGTTGTCGATGGTGTCCGACGACTCCAC 48100 Query 41815 CTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCATGTTA 41866 ||| | || || || || || || || ||||| || |||||||||||| || Sbjct 48099 CTCAAGGGTGATAGTCTTGCCGGTGAGGGTCTTCACAAAAATCTGCATGATA 48048 >seq79 Length=276002 Score = 125 bits (138), Expect = 7e-24 Identities = 222/324 (69%), Gaps = 0/324 (0%) Strand=Plus/Minus Query 49617 GCCGATGATGCCGCAGCCGAGTCTGCTGCCAGAGTTGCCGGTGATTTTGCTCTGCTCGTC 49676 ||| |||| ||||||| | | | | ||| | ||| ||||| | || | |||| | Sbjct 193295 GCCAATGACGCCGCAGGCCTGGCGACCGCCGGCGTTACCGGTAGTGATGGACAGCTCATG 193236 Query 49677 GTCGCCCAGGCCAAAGTCGTCCTCCATGGCGTGCACCACGATGCTGCGCCCGAGAATGTT 49736 | ||||| ||| | |||||||| ||| ||||| || ||| |||| |||| || | | Sbjct 193235 GCCGCCCTTGCCCAGATCGTCCTCGTCGGCATGCACAACAATGGTGCGGCCGATAACGCT 193176 Query 49737 GTGCGGGCCGAACAGCGACAGCATCGCGTCAAACGTGTCGAACAGGGTGACGGTCGAGCC 49796 |||| ||| ||||||| || | || ||| | | |||| | || ||| || | Sbjct 193175 GTGCTCGCCAAACAGCGTCACCTGCGAGTCGGAGATCTCGACCTTGGCCACGCCGGACTC 193116 Query 49797 GTCCGAGCACACGTTGCCCAGATCGCCGAGGTGACGCCGCGGGCTCGCGGGACCGCCGTG 49856 | || | ||||||||||| ||||| | || ||| | || || ||||||| Sbjct 193115 GGACGCGATGACGTTGCCCAGGTCGCCCACATGGCGCTCCTCAGCCGTCGGCGCGCCGTG 193056 Query 49857 CGGCTGCCCGAACGGGTTCAGGTGCTCGCCTGCTGACGTGCACCCGTTCGAGGTGTCGCC 49916 || || | ||||||||| | |||| ||| || |||||||| ||||||||| ||||||| Sbjct 193055 CGTCTTCTTGAACGGGTTGAAGTGCGGGCCCGCCGACGTGCAGCCGTTCGAGTTGTCGCC 192996 Query 49917 GAATTCGTGGATGTGTATACCGTG 49940 || ||||| | ||| | ||||| Sbjct 192995 AAACTCGTGCACGTGGAATCCGTG 192972 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 462302688212400