Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lobosporangium_20transversale_20[genbank_20GCA_5F002105155.1_202017- 04-20] 138 sequences; 42,768,949 total letters Query= NC_001266.1 Length=159857 Score E Sequences producing significant alignments: (Bits) Value seq57 91.5 2e-13 >seq57 Length=574579 Score = 91.5 bits (100), Expect = 2e-13 Identities = 204/306 (67%), Gaps = 3/306 (1%) Strand=Plus/Minus Query 16474 ATACGTATCAATCAGTAAACTGTACATTTCTGAGTGTATGTTCTCTATGGCTATCTGAAA 16533 ||| || ||||| || | | |||||| ||||| || | ||||| || || || || Sbjct 520467 ATAGGTGTCAATGAGAAGAGAGTACATCTCTGAATGAACATTCTCAATCATGATTTGGAA 520408 Query 16534 TCCATAGAAGCATCGAGCCTCCGCTATTTGTACTTCCACGTAAAATCGTTCCGCCAGGTT 16593 ||||| ||||||| || || | || || || || | || |||||| ||||| Sbjct 520407 GCCATAAAAGCATCTTGCTTCAGGGATCTGGACCTCATTCGAGAAACGTTCCAAGAGGTT 520348 Query 16594 CTCATTCACGATACCGTCACTTGCAGCAAAAAACGCCAATATGTGCTTAATGAAATATTT 16653 ||||||||| ||||| || || |||||||| || |||| ||||| || ||| || Sbjct 520347 CTCATTCACAATACCATCGCTAGCAGCAAAGAAGGCCAGGATGTGTGAAACGAAGAATCG 520288 Query 16654 TTCGTCAGATGT---AAGAATATGCCAATCTTTTAAATCTTTGGATATATCCACTTCTTC 16710 ||| || ||| | | | | ||| || | | || ||||| | ||| ||||| || Sbjct 520287 TTCATCTTCTGTCAAACGGTTTTCCCAGTCATGCATGTCCTTGGAAAGATCTACTTCCTC 520228 Query 16711 TGGCGTCCAAAAGCTAGCCACTGCCTTTTTATACATTTTCCAAATATCATTGTATTGTAT 16770 | ||||| ||| || | ||||| || ||||| | ||| | |||| | | | || Sbjct 520227 AGCAGTCCAGAAGGATGCTTCAGCCTTCTTGTACATCTGCCAGACCTCATGGAACTTGAT 520168 Query 16771 GGGAAA 16776 ||| || Sbjct 520167 GGGGAA 520162 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 511413517810160