Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lobosporangium_20transversale_20[genbank_20GCA_5F002105155.1_202017- 04-20] 138 sequences; 42,768,949 total letters Query= NC_001350.1 Length=112930 Score E Sequences producing significant alignments: (Bits) Value seq62 104 2e-17 >seq62 Length=1732855 Score = 104 bits (114), Expect = 2e-17 Identities = 229/343 (67%), Gaps = 8/343 (2%) Strand=Plus/Minus Query 101926 ATTCCAAGCACACATTAACATCCTTCTATCTGTAGGGTTTGTTTTTATAGTATCAATCAA 101985 |||||| |||| ||| | || | | ||| ||||| | | || || | ||| | Sbjct 204806 ATTCCATGCACTCATGATAATGCGACGATCCGTAGGCGTGTTCTTGATCTTCCAAATGAC 204747 Query 101986 CTGTTTTAATTGGTCAACTCCTTCTCCTTTATAATCGCGCCCAACACCTTTATATTCTGC 102045 || | ||||||||||||||||| ||| ||||||| || | || | ||||| || Sbjct 204746 CTCTGCTAATTGGTCAACTCCTTGACCTGTATAATCCGTATCACAATCTCTGTATTCGGC 204687 Query 102046 TCCGAAATGCCTCCACTGAAATCCATACACAGGTCCAAGATC----TCCTTCATCTCTGT 102101 ||||||||| |||||||| || ||||| ||||| || || || |||| |||||| Sbjct 204686 TCCGAAATGTCTCCACTGGAACCCATAGACAGGACCCAGGTCACCGACCTTACGCTCTGT 204627 Query 102102 CATAAAAACCAAGTTTATCTAAAAATGATCTAGATCCATTCGCATCCCAAATGTGCACGC 102161 | | |||| ||| |||||||| ||| |||||||| ||||||| || | | | Sbjct 204626 C----AGCCCAATTTTGTCTAAAAACTCTCTGGATCCATTGCCATCCCAGATCTTGATCC 204571 Query 102162 CAGCTGCTGATAGCTCTTTGCTGTCAGTAGATCCTCTGATAAACCACAACAGTTCTTCAA 102221 | | |||| | | | || ||| ||| | | ||||||||||| || || | Sbjct 204570 CCTTTTCTGACAAATGAAGACCGTTGGTATCACCTTTCACAAACCACAACAACTCCTCGA 204511 Query 102222 CAACACCTCTCCAAAATACTCTCTTAGTAGTTAAAAGTGGAAA 102264 |||| | | | || |||| ||| || || || | |||||| Sbjct 204510 CAACTGCGCGAAAGAAAACTCGCTTGGTCGTCAACAATGGAAA 204468 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 361250592420638