Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lobosporangium_20transversale_20[genbank_20GCA_5F002105155.1_202017- 04-20] 138 sequences; 42,768,949 total letters Query= NC_001993.1 Length=236120 Score E Sequences producing significant alignments: (Bits) Value seq53 109 8e-19 >seq53 Length=681236 Score = 109 bits (120), Expect = 8e-19 Identities = 165/235 (70%), Gaps = 0/235 (0%) Strand=Plus/Minus Query 124534 ATACAATGCAAATATTTATAAAGACACTAACAGGCAAAACTATAACTATAGAGATTGAAG 124593 ||| |||||| || ||| | |||||||| || ||||| || || ||| | ||| | || Sbjct 253271 ATAAAATGCAGATTTTTGTCAAGACACTCACCGGCAAGACCATTACTTTGGAGGTAGAGT 253212 Query 124594 CAAATGATACAATTTCTAATTTAAAACAGAAAATTCAAGATAAAGAAGGTATACCACCTG 124653 | || || || ||| | ||||||||||| || || || |||||||| || || | Sbjct 253211 CCTCCGACACTATCGACAATGTTAAACAGAAAATCCAGGACAAGGAAGGTATTCCTCCAG 253152 Query 124654 ATCAACAAAGGCTTATTTTTGCAGGAAAACAATTAGAGGATAGTCGAACATTAGAAGATT 124713 | || || | || || ||||| ||||| ||| | || ||| | || || | |||| Sbjct 253151 ACCAGCAGCGTCTCATCTTTGCTGGAAAGCAACTTGAAGATGGACGTACGCTTTCCGATT 253092 Query 124714 ATAATATTCAAAAAGAATCAACTTTGCATTTGGTTTTACGTTTACGAGGTGGTAT 124768 ||||||||||||| || || || | || ||||| | ||| | || || ||||| Sbjct 253091 ATAATATTCAAAAGGAGTCGACCCTTCACTTGGTCCTCCGTCTCCGTGGAGGTAT 253037 Score = 91.5 bits (100), Expect = 2e-13 Identities = 158/230 (69%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 124539 ATGCAAATATTTATAAAGACACTAACAGGCAAAACTATAACTATAGAGATTGAAGCAAAT 124598 ||||| || || | |||||||| || ||||| || || ||| | || |||| | Sbjct 252810 ATGCAGATTTTCGTCAAGACACTCACTGGCAAGACAATCACTTTGGAAGTTGAGTCTTCC 252751 Query 124599 GATACAATTTCTAATTTAAAACAGAAAATTCAAGATAAAGAAGGTATACCACCTGATCAA 124658 || || || || | || ||||| ||||| || || |||||||| || || || || Sbjct 252750 GACACCATCGACAACGTCAAGCAGAAGATTCAGGACAAGGAAGGTATTCCTCCAGACCAG 252691 Query 124659 CAAAGGCTTATTTTTGCAGGAAAACAATTAGAGGATAGTCGAACATTAGAAGATTATAAT 124718 || | |||||||| || |||||||| | |||||| | || || | || |||||| Sbjct 252690 CAGCGTCTTATTTTCGCCGGAAAACAGCTTGAGGATGGCCGCACGCTCTCTGACTATAAT 252631 Query 124719 ATTCAAAAAGAATCAACTTTGCATTTGGTTTTACGTTTACGAGGTGGTAT 124768 ||||| || ||||| || | || | ||| | ||| | || || ||||| Sbjct 252630 ATTCAGAAGGAATCCACCCTCCACCTAGTTCTTCGTCTTCGCGGCGGTAT 252581 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 755454696838400