Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lobosporangium_20transversale_20[genbank_20GCA_5F002105155.1_202017- 04-20] 138 sequences; 42,768,949 total letters Query= NC_002642.1 Length=144575 Score E Sequences producing significant alignments: (Bits) Value seq57 102 8e-17 >seq57 Length=574579 Score = 102 bits (112), Expect = 8e-17 Identities = 179/260 (69%), Gaps = 3/260 (1%) Strand=Plus/Minus Query 16529 TACATTTCTGAATGAATATTCTCCATTGCTATCTGAAAACCATAAAAGCATCTAGCTTCG 16588 ||||| |||||||||| |||||| || || || || |||||||||||||| ||||| Sbjct 520445 TACATCTCTGAATGAACATTCTCAATCATGATTTGGAAGCCATAAAAGCATCTTGCTTCA 520386 Query 16589 GATATTTGTACTTCAGAGTAAAACCTTTCTGCTAAGTTTTCGTTAACTATTCCATCGCTA 16648 | || || || ||| | || | ||| | ||| || || || || ||||||||| Sbjct 520385 GGGATCTGGACCTCATTCGAGAAACGTTCCAAGAGGTTCTCATTCACAATACCATCGCTA 520326 Query 16649 GCTGCAAAAAACGCAAGTATGTGTTTAATAAAAtttttttCGTTATCTG---AAAGTTTT 16705 || ||||| || || || |||||| || || | ||| | |||| || | ||| Sbjct 520325 GCAGCAAAGAAGGCCAGGATGTGTGAAACGAAGAATCGTTCATCTTCTGTCAAACGGTTT 520266 Query 16706 AACCAGTCAGAAAAATCTTTTGATAAATCGACCTCTTCTACAGTCCAAAAAGAAGCAACA 16765 ||||||| | || || || | ||| || || || ||||||| || || || || Sbjct 520265 TCCCAGTCATGCATGTCCTTGGAAAGATCTACTTCCTCAGCAGTCCAGAAGGATGCTTCA 520206 Query 16766 GCCTTTTTATACATTTTCCA 16785 ||||| || ||||| | ||| Sbjct 520205 GCCTTCTTGTACATCTGCCA 520186 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 462511202166800