Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lobosporangium_20transversale_20[genbank_20GCA_5F002105155.1_202017- 04-20] 138 sequences; 42,768,949 total letters Query= NC_004062.1 Length=119217 Score E Sequences producing significant alignments: (Bits) Value seq84 86.0 5e-12 >seq84 Length=1068272 Score = 86.0 bits (94), Expect = 5e-12 Identities = 155/227 (68%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 42883 CCTCCACGCAGTCTTAACACCAAATGGATAGTGCTCTCCTTTTGCACATTGTAATCGGAC 42942 || ||||| || | | |||||| |||| |||| |||||| || | ||||||||||| Sbjct 721354 CCACCACGGAGGCGCAGCACCAAGTGGAGAGTGGACTCCTTCTGGATGTTGTAATCGGAG 721295 Query 42943 AATGTACGTTCGTCGTCCAATTGTTTGCCGGCAAAAATCAATCGCTGTTGATCGGCCGGC 43002 | ||||| | || ||||| || |||||||| ||||| | ||||| || || | || Sbjct 721294 AGGGTACGGCCATCTTCCAACTGCTTGCCGGCGAAAATGAGGCGCTGCTGGTCTGGAGGA 721235 Query 43003 ACACCTTCTTTTTCGCTGATCAACTCTTTGACTCTGCCAACTGTGTCGCCAGCCTCGACG 43062 | ||||| || || ||| || ||||| | | | ||||| | |||||| Sbjct 721234 ATGCCTTCCTTATCTTGAATCTTCTGCTTGACGTTATCGATCGTGTCAGAGGACTCGACC 721175 Query 43063 TCTACCGTTATAGTTTTTCCGGTTAGAGTTTTCACAAAAATTTGCAT 43109 || | || || || || ||||| | || || || ||||| ||||| Sbjct 721174 TCAAGGGTGATGGTCTTGCCGGTCAAGGTCTTGACGAAAATCTGCAT 721128 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 381368958584004