Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lobosporangium_20transversale_20[genbank_20GCA_5F002105155.1_202017- 04-20] 138 sequences; 42,768,949 total letters Query= NC_004117.1 Length=158482 Score E Sequences producing significant alignments: (Bits) Value seq53 107 2e-18 >seq53 Length=681236 Score = 107 bits (118), Expect = 2e-18 Identities = 170/240 (71%), Gaps = 4/240 (2%) Strand=Plus/Plus Query 142958 CCTCCTCGTAAACGCAAAACTAAATGAATTGTAGATTCTTTTTGTATGTTGTAATCGCTC 143017 ||||| || | ||| | || || |||| || || || ||||| || || |||||| Sbjct 253040 CCTCCACGGAGACGGAGGACCAAGTGAAGGGTCGACTCCTTTTGAATATTATAATCGGAA 253099 Query 143018 ATTGTGC-TCGAGTCTTCGAGTTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGG 143076 | || | || | ||||| ||||| || |||||| |||| ||||| ||||| || ||||| Sbjct 253100 AGCGTACGTCCA-TCTTCAAGTTGCTTTCCAGCAAAGATGAGACGCTGCTGGTCTGGAGG 253158 Query 143077 TATGCCTTCTTTGTCGGTAATTTTTTGTTTTAGCTGTTCCACCGTGTCCGTGGGTTCTAC 143136 || ||||| ||||| ||||| ||||| | | || | ||||| | || ||||| Sbjct 253159 AATACCTTCCTTGTCCTGGATTTTCTGTTTAACATTGTCGATAGTGTCGGAGGACTCTAC 253218 Query 143137 TTCAACAGTCACCGTCTTGCCGGTCAATGTTTTTACGAATATTTGCATAGCTTATGTTTT 143196 || | ||| | ||||||||||| | ||| || || || || ||||| |||||| || Sbjct 253219 CTCCAAAGTAATGGTCTTGCCGGTGAGTGTCTTGACAAAAATCTGCAT--TTTATGTATT 253276 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 507013525400160