Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lobosporangium_20transversale_20[genbank_20GCA_5F002105155.1_202017- 04-20] 138 sequences; 42,768,949 total letters Query= NC_006639.1 Length=24748 Score E Sequences producing significant alignments: (Bits) Value seq128 206 4e-49 seq106 206 4e-49 >seq128 Length=917205 Score = 206 bits (228), Expect = 4e-49 Identities = 204/261 (78%), Gaps = 2/261 (1%) Strand=Plus/Minus Query 16433 GCTAAGCGTCATCGCA-GATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTAT 16491 || ||||| ||||||| ||| |||||| ||||||||||| || ||||||||||| ||||| Sbjct 812098 GCCAAGCGCCATCGCAAGAT-TCTTCGTGATAACATCCAGGGTATCACCAAGCCCGCTAT 812040 Query 16492 CCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGAT 16551 ||||||||| || ||||||||||| ||||||||| |||| || | ||||||| |||| Sbjct 812039 CCGTCGTCTCGCCCGTCGTGGTGGTGTCAAGCGTATCTCCGGTCTCATCTATGAGGAGAC 811980 Query 16552 TCGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCGA 16611 ||| || | ||| |||||||| ||| ||| |||| ||||||| || ||| || || Sbjct 811979 CCGTTCCGTCCTCAAGGTCTTCCTCGAGAACGTCATCCGTGATGCTGTCACCTACACTGA 811920 Query 16612 GCACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAGG 16671 |||||| || || ||||| |||||||| | ||| |||||||||| | || || || || Sbjct 811919 GCACGCCAAGCGCAAGACCGTCACCTCGCTCGATGTCGTCTATGCCCTCAAGCGCCAGGG 811860 Query 16672 CCGTAAGATTTATGGTTTTGG 16692 || | | |||||||| || Sbjct 811859 TCGCACCCTCTATGGTTTCGG 811839 >seq106 Length=977852 Score = 206 bits (228), Expect = 4e-49 Identities = 204/261 (78%), Gaps = 2/261 (1%) Strand=Plus/Plus Query 16433 GCTAAGCGTCATCGCA-GATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTAT 16491 || ||||| ||||||| ||| |||||| ||||||||||| || ||||||||||| ||||| Sbjct 706998 GCCAAGCGCCATCGCAAGAT-TCTTCGTGATAACATCCAGGGTATCACCAAGCCCGCTAT 707056 Query 16492 CCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGAT 16551 ||||||||| || ||||||||||| ||||||||| |||| || | |||||||||||| Sbjct 707057 CCGTCGTCTTGCCCGTCGTGGTGGTGTCAAGCGTATCTCCGGTCTCATCTATGAAGAGAC 707116 Query 16552 TCGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCGA 16611 ||| ||| | ||| |||||||| ||| || |||| |||||| || ||| ||||| Sbjct 707117 TCGCTCTGTCCTCAAGGTCTTCCTCGAGAATGTCATCCGTGATGCCGTCACCTACACCGA 707176 Query 16612 GCACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAGG 16671 ||| || || || ||||| |||||||| | ||| |||||||||| | || || || || Sbjct 707177 GCATGCCAAGCGCAAGACCGTCACCTCGCTCGATGTCGTCTATGCTCTCAAGCGCCAGGG 707236 Query 16672 CCGTAAGATTTATGGTTTTGG 16692 || | |||| ||||| || Sbjct 707237 TCGCACCCTTTACGGTTTCGG 707257 Score = 170 bits (188), Expect = 3e-38 Identities = 196/261 (75%), Gaps = 2/261 (1%) Strand=Plus/Minus Query 16433 GCTAAGCGTCATCGCA-GATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTAT 16491 |||||||| ||||||| ||| |||||| || |||||||| || ||||||||||| || || Sbjct 376989 GCTAAGCGCCATCGCAAGAT-TCTTCGTGACAACATCCAGGGCATCACCAAGCCTGCCAT 376931 Query 16492 CCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGAT 16551 ||||||||| || ||||||||||| || |||||| ||||||| | |||| || |||| Sbjct 376930 CCGTCGTCTTGCCCGTCGTGGTGGTGTGAAGCGTATCTCTGGTCTCATCTACGAGGAGAC 376871 Query 16552 TCGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCGA 16611 || ||| ||||| | ||||| ||| || |||| |||||| || || || || Sbjct 376870 CCGCTCTGTCTTGAAAGTTTTCCTTGAGAATGTCATCCGCGATGCTGTCACTTACACTGA 376811 Query 16612 GCACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAGG 16671 ||| || || || |||||||| ||||| | || | |||||||| |||| || || || Sbjct 376810 GCATGCCAAGCGCAAGACTGTTACCTCTCTTGACGTTGTCTATGCTCTGAAGCGCCAGGG 376751 Query 16672 CCGTAAGATTTATGGTTTTGG 16692 || | | |||||||| || Sbjct 376750 TCGCACTCTCTATGGTTTCGG 376730 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 79075073825634