Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lobosporangium_20transversale_20[genbank_20GCA_5F002105155.1_202017- 04-20] 138 sequences; 42,768,949 total letters Query= NC_008293.1 Length=135454 Score E Sequences producing significant alignments: (Bits) Value seq53 122 8e-23 seq84 105 6e-18 >seq53 Length=681236 Score = 122 bits (134), Expect = 8e-23 Identities = 157/215 (73%), Gaps = 4/215 (2%) Strand=Plus/Minus Query 24998 AATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTC 25057 |||||| || ||||| ||||| | ||||| || |||| || | || || ||||| || Sbjct 253267 AATGCAGATTTTTGTCAAGACACTCACCGGCAAGACCATTACTTTGGAGGTAGAGTCCTC 253208 Query 25058 TGACACTATCGAGTCACTG--AAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGAC 25115 ||||||||||| || || || || |||||| ||||| ||||| ||||| || ||| Sbjct 253207 CGACACTATCGA--CAATGTTAAACAGAAAATCCAGGACAAGGAAGGTATTCCTCCAGAC 253150 Query 25116 CAACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTAC 25175 || ||||| | || ||||| || || ||| | ||||||| || || | |||||| Sbjct 253149 CAGCAGCGTCTCATCTTTGCTGGAAAGCAACTTGAAGATGGACGTACGCTTTCCGATTAT 253090 Query 25176 AATATTCAAAAAGAATCCACGCTACATTTAGTGCT 25210 ||||||||||| || || || || || || || || Sbjct 253089 AATATTCAAAAGGAGTCGACCCTTCACTTGGTCCT 253055 >seq84 Length=1068272 Score = 105 bits (116), Expect = 6e-18 Identities = 151/211 (72%), Gaps = 4/211 (2%) Strand=Plus/Plus Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058 ||||| || || || ||||| |||||||| || ||||||| |||| || ||||| ||| Sbjct 720900 ATGCAGATTTTCGTCAAGACCTTGACCGGCAAGACCATCACCCTCGAGGTCGAGTCCTCT 720959 Query 25059 GACACTATCGAGTCACTG--AAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACC 25116 || || || || || || ||||| || ||| |||||||| || ||||| || |||| Sbjct 720960 GATACCATTGA--CAATGTCAAGCAGAAGATCCAAGACAAAGAGGGTATTCCCCCAGACC 721017 Query 25117 AACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACA 25176 | ||||| | || ||||||||||| || | || |||| || || | || || | Sbjct 721018 AGCAGCGTCTCATCTTTGCCGGCAAGCAGCTTGAGGATGGCCGTACCCTTTCTGACTATA 721077 Query 25177 ATATTCAAAAAGAATCCACGCTACATTTAGT 25207 | || || || || || || || ||||| || Sbjct 721078 ACATCCAGAAGGAGTCTACTCTTCATTTGGT 721108 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 433327271196470