Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lobosporangium_20transversale_20[genbank_20GCA_5F002105155.1_202017- 04-20] 138 sequences; 42,768,949 total letters Query= NC_008518.1 Length=174059 Score E Sequences producing significant alignments: (Bits) Value seq57 109 6e-19 >seq57 Length=574579 Score = 109 bits (120), Expect = 6e-19 Identities = 232/342 (68%), Gaps = 16/342 (5%) Strand=Plus/Minus Query 92926 ATCAGCTACAAATTCTATGTACTGAGACATCAAATCACAATTCATTCCTAGAAGACGT-A 92984 ||| || ||||| || ||||| || |||||| | |||||| || | | || | | Sbjct 521244 ATCGGCCACAAACTCAATGTATTGTTTCATCAACTTGGCATTCATACCAATCA-ACATCA 521186 Query 92985 CAGGTAGAGCGTCGGTCAAGAAATCTTTCTCGATTACAACGGCTTCTTTCAAGATTTCTA 93044 |||| ||||| ||||||||||| |||| ||||| ||||| || ||| | | ||| | Sbjct 521185 CAGGGAGAGCATCGGTCAAGAACTCTTGTTCGATCACAACAGCCTCTGTAATGATAGCAT 521126 Query 93045 TTACTCTACTATTTGGTGGTTTTTGTACGACAT------AATT-GTACATTAAGCACGCA 93097 | || | | |||||| | |||| || ||| | ||| |||||| || Sbjct 521125 TGACACG--TTTTTGGTCA-----GGACGAGATCTCAACAATGAGAACAATAAGCAGGCG 521073 Query 93098 AAGTCGGTATGTAAACCTTCGTCTCGTGATATCAACTCATTGCTGAATGTTAAACCTGGT 93157 || || || || | ||| || || || || || | || ||| ||| || | ||| || Sbjct 521072 AAATCAGTGTGGAGACCCTCATCACGCGAGATGAGTTCGTTGGAGAAGGTCAGACCAGGC 521013 Query 93158 AACAGTCCTCGTTTCTTGAGCCAAAATATTGAAGCAAAACTACCAGaaaaaaaTATACCT 93217 | || || || || ||||||||||| || ||||| || ||||| || || || ||| Sbjct 521012 ATGAGACCACGCTTTTTGAGCCAAAAGATGGAAGCGAATGCGCCAGAGAAGAAGATGCCT 520953 Query 93218 TCCACGGCTGCAAATGCCACAATACGTTCGGCAAAATTTGCG 93259 || || || ||||| || || | |||||| ||||| ||||| Sbjct 520952 TCAACAGCAGCAAAGGCGACCAAACGTTCAGCAAAGGTTGCG 520911 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 556859839415120