Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lobosporangium_20transversale_20[genbank_20GCA_5F002105155.1_202017- 04-20] 138 sequences; 42,768,949 total letters Query= NC_010191.2 Length=186713 Score E Sequences producing significant alignments: (Bits) Value seq49 280 2e-70 seq47 141 1e-28 seq57 118 1e-21 seq1 93.3 5e-14 >seq49 Length=746914 Score = 280 bits (310), Expect = 2e-70 Identities = 1003/1543 (65%), Gaps = 60/1543 (4%) Strand=Plus/Minus Query 113698 TTGGGATTGATCGATGAAGCGTCCACGATCCGCCGCCATATCAATCACATCCTTCATCTT 113757 ||| ||||||||||| || ||||||||||| ||||| ||||| | |||| Sbjct 374684 TTGAGATTGATCGATATAGGCCCCACGATCCGCTGCCATGTCAATGATGACCTTTTGAGA 374625 Query 113758 GATTTCCCACACAGTTCTGTAGA-GGTTCTTAATATCATCTGGGATATCCACGATATTTT 113816 |||||||||| || |||| | || | |||| ||||||||| | | |||||||| Sbjct 374624 GATTTCCCACGTGGTCTTGTACAAGGCTTTTAA-ATCATCTGGAACCCCAGAGATATTTT 374566 Query 113817 GGATGGAGCCACCCGCCTTGACCATGAGATCCTTCATA-------TCCTTTGACCA-GA- 113867 |||| |||||| | || | || | | ||| | | ||| | ||||| || Sbjct 374565 GGATAGAGCCATTCTCCGCAATGATCCGGTTCTTTAGAGAATCGGTCCATAGACCACGAT 374506 Query 113868 -GACCAATCTTTTTGAGATCCTCCACGAGATGCTTATTGACAACAACAAACTCACCCGCG 113926 ||||| | | |||||| | |||| | | || |||| || ||||||||| Sbjct 374505 CGACCA-TATCTTTGAG--CATCCAAGGG-------TTCACAATCTGGAATTCACCCGCG 374456 Query 113927 AGGGTGCGTCTCAGATAGATATTGGTCGTGTATGGCTCAAAGCACTCATTGTTACCCAAG 113986 || |||||| | |||| |||| || || |||||||| || ||||||||||||||| Sbjct 374455 AGAACGCGTCTTGTAAAGATGTTGGAAGTATAAGGCTCAAAACATTCATTGTTACCCAAG 374396 Query 113987 ATTTGGGCGGTGGAGGCTGTGGGCATGGGTGCCATGAGAAGGCTGTTACGGAGACCCTTT 114046 || |||| ||||| |||||||||||||| || | || | ||| |||| || | Sbjct 374395 ATCTGGGATGTGGACGCTGTGGGCATGGGAGCTACAAGCAACGAGTTCCGGACGCCATGC 374336 Query 114047 TCCCTAATGCGTTCCTTGAGGGCGTCCCAGTCGTAGTTGAGC--TTTGTCTCCCCCTGCC 114104 | | |||| || |||| ||||||||| || || | || | | ||| || Sbjct 374335 TTCGAAATGTTGTCACGAAGGGTGTCCCAGTCCCAGA-GATCAGTTGGAGTGACCCC-CC 374278 Query 114105 ACATATCAAACTGGAGGATACCTTGGGAGGCTGGCGATCCCTCAAATGTCTCGTATGGGC 114164 |||| || || || ||||| | || |||| || || | | ||| |||| | Sbjct 374277 ACATGTCTGGTTGCAGAATACCCTTAGACACTGGAGACCCTGGATAGGTCACGTAGACAC 374218 Query 114165 CCTCAACCTCCGCCAATTCGGAGCTCGCCTCGAGGGCTGCGTGATACATTGTCTCAAAAA 114224 |||| | | || | || | || ||||| || || ||||| || |||||||||| Sbjct 374217 CCTCTTCTTGAGCAAGCTCACAAGATGCTTCGAGTGCAGCATGATAGATGGTCTCAAAAA 374158 Query 114225 TGCGAG-CATTCA--TTGCCTTGGCCTCGTCGGAATCAAACGCGAGTCGGCACAAA-ATA 114280 | | || | |||| |||| ||| || || ||||| | | | ||| | | Sbjct 374157 T-CAAGACGTTCAATTTGCG--GGCTTCAAGCGAGTCAAAGGGCA-TGTGCATTTTGAAA 374102 Query 114281 AATACATCCGCGAGACCTTGGACACCGAGGCCAATTGGGCGATGTCTCATATTAGACTTT 114340 || | || || || || ||||| || | |||||||| ||||| | | || |||||| Sbjct 374101 AAGGCGTCTGCTAGGCCCTGGACTCCCAATCCAATTGGACGATGACGTTTGTTGGACTTT 374042 Query 114341 CGAGCGGTCTCC---ACGGGATAAAAATTCCTATCGATAACCCTATTTAGATTTTTGGTG 114397 ||| ||| || || ||| | || ||||| |||||| |||| || || || Sbjct 374041 T---CGGCCTCAGGAACTGGGTAATAGTTTCTATCAATAACCTTATTCAGGTTCCGAGTT 373985 Query 114398 ACAACCTTTGTGATTTCATGAAGCTTTTCGTAATCAAA------ACTGCGAGTCTCTTCA 114451 || || || ||||| | || ||| | | | ||||||| | ||| | | || || Sbjct 373984 ACGACTTTAGTGATCTTGTGGAGCATCTTGAAATCAAATACTGGAATGCCATTGTCACCA 373925 Query 114452 TT---GACATACTTAGGAAGGGCGATTGACGCCAGATTACACACAGAGGTCTCATCCTTA 114508 | |||| | ||||||| || || |||| ||||| |||| | |||||| Sbjct 373924 GTCATGACAAAGGTAGGAAGAGCAATACTGGCCAAGTTACAGACAGCGACCTCATCAGGG 373865 Query 114509 TCAGTGTACTCTATAATTTCCGTACACAAATTTGAACTCTTAATGGTGCCCAAGTTCTTT 114568 |||| || || || || ||||| | ||| || ||| || || |||||||||| | Sbjct 373864 CTGCTGTATTCGATGATCTCTGTACAGAGATTACTACACTTGATAGTCCCCAAGTTCTGT 373805 Query 114569 TGATTTGACTTTGTGTTACACGCATCCTTGTAAAGCATGTATGGCGTCCCCGTCTCCGTT 114628 ||||| ||||| |||||| ||||| || |||||||| || ||||| || ||||| ||| Sbjct 373804 TGATTCGACTTGCGGTTACAGGCATCTTTATAAAGCATATAGGGCGTTCCAGTCTCTGTT 373745 Query 114629 TGGGACTTGAGAATAGCCTTCCAGA-CATCGGCGGCTGGCACAGTGGCGTTGGCTCGCCC 114687 || | || || || || ||| | | || | | || | | ||| || || || Sbjct 373744 TGAGCCTCCAGGATTGCGAACCACAGCTTCTGAGCCTTG-ATAGTCTTACGAGCCCGTCC 373686 Query 114688 CTCCTCCTCGTACTTTGTGTAGAGGGCTTCAAACTCTTCACCCACGGCCTCTGAGAGCCC 114747 ||| |||||| | | ||||| ||||||||||| ||| | | ||| || || Sbjct 373685 TTCCAGCTCGTAGGTCATATAGAGTTTCTCAAACTCTTCGCCCCAGACATCTTGTAGACC 373626 Query 114748 TGGTGCCTTATCTGGGCAGAAGAGAGACCATTGACCACCCTCCTCAACACGCTTCATGAA 114807 || |||| | | || || |||||| ||| | ||| || |||| || |||||||| Sbjct 373625 AGGCGCCTCAGCAGGACAAAAGAGACTCCAATCGCCATTCTGTTCAATTCGTTTCATGAA 373566 Query 114808 GAGGTCTGGGATCCAGAGAGCTGAGAAGAGATCCCGACAGCGAGCTTCTTCATCCCCCTG 114867 ||||| ||||||||||| | ||| | || ||| |||| ||||| | || Sbjct 373565 CAGGTCAGGGATCCAGAGTCCCAGGAACAAGTCTCGAGCACGAGTCTCTTCCTTGCCTGT 373506 Query 114868 ATTGAGACGCAACTCCAAAAAGTCCATGATATCCGCGTGCCACGGTTCCAGGTACACCGC 114927 ||| || | |||||||| || | | ||||| ||||| ||||||| |||| || Sbjct 373505 ATTCTTGCGAAGGTCCAAAAAATCAAACACGTCCGCATGCCAAGGTTCCAAATACATGGC 373446 Query 114928 GATTGACCCCTTACGAC----GACCAGCCTGGTTTACATACCTCGCTGTGGCATTAAATA 114983 | | | ||| | | ||| | || | |||||| ||||| || ||||||| Sbjct 373445 -AAAGGCTCCTGGCCGCTTGTTTCCACCTTGATCTACATATCTCGCGGTATTGTTAAATA 373387 Query 114984 CGCGAAGCATTGGAATGATACCATCAGATTGGCCATTTGTCCC--CCGAATACGAGACTT 115041 | | | ||| || || | || | ||| || ||||| || || | ||| || || Sbjct 373386 CCCTCAACATAGGGATCAATCCGTTAGAATGACCATTCGTACCAGCAATATATGAACCTG 373327 Query 115042 ATTGGCTCTGACATCATGGATGTGCATACCAATACCCCCTGCCCACTTTGAGATTTGCGC 115101 | ||||| || | ||||| | | ||||| || || || ||| ||||| || Sbjct 373326 A--GGCTCGGATGTTATGGACATTAAGGCCAATCCCACCAGCAGTCTTGGAGATCATGGC 373269 Query 115102 GCACTCCGTGAGACTGCCGTAGATCCCGTCGATCGAGTCACCCTTATTTGCGATAAGGAA 115161 || | |||| | |||| || || |||||||||||| |||| | | | ||||| Sbjct 373268 ACAAGACTTGAGGGTATCGTAAATTCCTTCGATCGAGTCATCCTTCATAGTCAAGAGGAA 373209 Query 115162 GCAGCTCGACATTTGTGGCCTTGGTGTACCAGCGTTGAAGAGG 115204 || || |||||||| |||||||| || ||||| || || ||| Sbjct 373208 ACAACTTGACATTTGAGGCCTTGGGGTCCCAGCATTAAACAGG 373166 >seq47 Length=818200 Score = 141 bits (156), Expect = 1e-28 Identities = 888/1405 (63%), Gaps = 47/1405 (3%) Strand=Plus/Minus Query 113942 TAGATATTGGTCGTGTATGGCTCAAAGCACTCATTGTTACCCAAGATTTGGGCGGTGGAG 114001 |||||||| | || || ||||| || || |||||| ||||| ||| || | ||| || Sbjct 306011 TAGATATTAGAGGTATAGGGCTCGAAACATTCATTGAAACCCAGGATCTGTGAGGTCGAA 305952 Query 114002 GCTGTGGGCATGGGTGCCATGAGAAGGCTGTTACGGAGACCCTTTTCCCTAATGCGTTCC 114061 || || ||||| ||||||| | || ||| || | || | | | | || | || Sbjct 305951 GCCGTAGGCATCGGTGCCACCAAGAGTGAGTTGCGCACTCCATGCTGCTTGATACTGGCC 305892 Query 114062 TTGAGGGCGTCCCAGTCGTAGTTGAGCTTTGTC---TCCCCCTGCCACATATCAAACTGG 114118 ||| | |||||||| || || | | | |||| |||||| || || Sbjct 305891 CGGAGCGTATCCCAGTCCCAGA-GATCGGAGGGCGTTACCCC--CCACATGTCCGGTTGC 305835 Query 114119 AGGATACCTTGGGAGGCTGGCGATCCCTCAAATGTCTCGTATGGGCCCTCAACCTCCGCC 114178 | ||| || | || | || || |||||| | ||||| || | ||||| ||| ||| Sbjct 305834 AAGATTCCCTTCGAAACGGGTGAGCCCTCATAGGTCTCATAAGTACCCTCCTCCTGAGCC 305775 Query 114179 AATTCGGAGCTCGCCTCGAGGGCTGCGTGATACATTGTCTCAAAAATGCGAGCATTCAT- 114237 | || || | || | || || ||||| || ||||| ||||| | |||| Sbjct 305774 ATCTCACAGGATGATTCCAAAGCCGCATGATAGATGGTCTCGAAAATCTGCTTGTTCAAC 305715 Query 114238 TGCCTTGGCCTCGTCGGAATCAAACGCGAGTCGGCACAAAATAAATACATCCGCGAGACC 114297 || | || ||||| || ||||| | | || | || ||| ||||||| ||||| Sbjct 305714 TGACGTG-CCTCGGGTGAGTCAAAGGGCATGCGCATCTTGATGAATGCATCCGCTAGACC 305656 Query 114298 TTGGACACCGAGGCCAATTGGGCGATGTCTCATATTAGACTTTCGAGCGGTCTCC---AC 114354 |||||||| | || | || ||||| | | | || ||| || | | ||| || Sbjct 305655 CTGGACACCCACACCCACAGGACGATGACGCTTGTTGGAC---CGCTCTGCCTCTGGAAC 305599 Query 114355 GGGATAAAAATTCCTATCGATAACCCTATTTAGATTTTTGGTGACAACCTTTGTGATTTC 114414 ||||| | ||| ||| |||| | | || | || ||| || ||||| |||| | Sbjct 305598 AGGATAGTAGTTCTGATCAATAATCTTGTTCAAGTTGCGGGTCACGACCTTGGTGACCTG 305539 Query 114415 ATGAAGCTTTTCGTAATCAAAACTGCGAGTCTCTTCATTGACATACTTAGGAAGGGCGAT 114474 |||||| | | | | ||| | |||| | ||||| | | | || || || || Sbjct 305538 GTGAAGCATCTTGAAGTCATAC------GTCTGATTATTGATAAAAGTCGGCAGCGCAAT 305485 Query 114475 TGACGCCAGATTACACACAGAGGTCTCATCCTTATCAGTGTACTCTATAATTTCCGTACA 114534 |||| ||||| || | || || | |||| || | ||| || ||||| Sbjct 305484 ACTGGCCAAGTTACAGACCGCTACTTCGTCTGGACTGCTGTATTCAACAATCTCTGTACA 305425 Query 114535 CAAATTTGAACTCTTAATGGTGCCCAAGTTCTTTTGATTTGACTTTGTGTTACACGCATC 114594 |||||| | ||| || || || | ||||| |||||| || || ||| || ||||| Sbjct 305424 CAAATTACTGCACTTGATCGTTCCAAGGTTCTGTTGATTCGATTTACGGTTGCAAGCATC 305365 Query 114595 CTTGTAAAGCATGTATGGCGTCCCCGTCTCCGTTTGGGACTTGAGAATAGCCTTCCAGA- 114653 ||||||||||||||| ||||| || ||||| || |||| || |||||||| | ||||| Sbjct 305364 CTTGTAAAGCATGTAAGGCGTACCGGTCTCGGTCTGGGCCTCCAGAATAGCATACCAGAG 305305 Query 114654 CATCGGCGGCTGGCACAGTGGCGTTGGCTCGCCCCTCCTCCTCGTA-CTTTGTGTAGAGG 114712 || | | || | | || | ||| || ||||| ||| || | || ||||| Sbjct 305304 TTTCTGGGCCTTG-ATGGTCTTGCGGGCACGACCCTCACGCTCATATCGATG-ATAGAGT 305247 Query 114713 GCTTCAAACTCTTCACCCACGGCCTCTGAGAGCCCTGGTGCCTTATCTGGGCAGAAGAGA 114772 | || || ||||| ||| | ||| || || ||||||| | || ||||| ||| Sbjct 305246 TCCTCGAATTCTTCGCCCCACACATCTTGAAGTCCAGGTGCCTCCGCAGGACAGAACAGA 305187 Query 114773 GACCATTGACCACCCTCCTCAACACGCTTCATGAAGAGGTCTGGGATCCAGAGAGCTGAG 114832 ||| | | | ||||| | ||| ||||||| || || |||||||||||||| || Sbjct 305186 CTCCAGTCAGCGTTTTCCTCGATACGTCTCATGAACAGATCAGGGATCCAGAGAGCATAG 305127 Query 114833 AAGAGATCCCGA-CAGCGAGCTTCTTCATCCCCCTGATTGAGACGCAACTCCAAAAAGTC 114891 || | ||| ||| || | || || | | || || || || | |||| || || Sbjct 305126 AACAAATCACGAGCACGGGTCTCCTCCTTTCCAGTG-TTCTTGCGAAGATCCAGGAATTC 305068 Query 114892 CATGATATCCGCGTGCCACGGTTCCAGGTACACCGCGATTGACCCCTTACGACG------ 114945 | || ||| || ||||| ||||| || |||| || | | || | |||| Sbjct 305067 AAAGACATCGGCATGCCAGGGTTCGAGATACATGGCAAAGGCACC---AGGACGCTTGTT 305011 Query 114946 ACCAGCCTGGTTTACATACCTCGCTGTGGCATTAAATACGCGAAGCATTGGAATGATACC 115005 || |||| | ||||| | || || || | || |||||||| ||||| | || Sbjct 305010 GCCGCCCTGATCAACATAACGAGCCGTATTGTTGTAGACACGAAGCATAGGAATCAACCC 304951 Query 115006 ATCAGATTGGCCATTTGTCCCCCGAA--TACGAGACTTATTGGCTCTGACATCATGGATG 115063 || || | || || || || || || || | | || | | | || || Sbjct 304950 ATTGGAATATCCGTTCGTTCCAGCAATGTATGAACCCGA--CGCACGAATGTTGTGAATA 304893 Query 115064 TGCATACCAATACCCCCTGCCCACTTTGAGATTTGCGCGCACTCCGTGAGACTGCCGTAG 115123 | | |||||| || || || || ||||| || || | |||| | | ||| Sbjct 304892 TTAAGACCAATGCCTCCAGCGGTTTTCGAGATCATGGCACAGGTCTTGAGGGTATCATAG 304833 Query 115124 ATCCCGTCGATCGAGTCACCCTT-ATTTGCGATAAGGAAGCAGCTCGACATTTGTGGCCT 115182 || || |||||||| ||| |||| || | | ||| || || | ||||| || || | Sbjct 304832 ATACCCTCGATCGAATCATCCTTCATCGTCAACAAGAAACAAGAT-GACATCTGAGGGCG 304774 Query 115183 TGGTGTACCAGCGTTGAAGAGGGTTGGTGTCGCGTGGATGAACATACCTTGGGACATCTT 115242 ||||| ||||| |||||||| || || | || ||| |||| || ||||| | Sbjct 304773 AGGTGTTCCAGCATTGAAGAGCGTGGGCGAAGCATGGGTGAAGTATTTTTCAGACATGTA 304714 Query 115243 ATCGTAGGTCTCCA-AGAC--GGCGGGAATGTCTTCCCCGTGAATACCGATCGAGACCCG 115299 || ||||||||| | || | | | | | ||| || || || |||| |||||| || Sbjct 304713 ATTGTAGGTCTCAATAGCCTTGTCCACATTATCT---CCATGGATCCCGACCGAGACACG 304657 Query 115300 CATAAACATGTATTGGGGTGTTTCC 115324 ||| ||||| | || ||| | ||| Sbjct 304656 CATCAACATATGCTGAGGTCTCTCC 304632 >seq57 Length=574579 Score = 118 bits (130), Expect = 1e-21 Identities = 138/184 (75%), Gaps = 2/184 (1%) Strand=Plus/Minus Query 126058 GTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGTCCTGGCATGAGACC 126117 |||||||||||| ||||| ||||||||||| || |||||| ||| || ||||||||||| Sbjct 521064 GTGGAGACCCTCATCACGCGAGATGAGTTCGTTGGAGAAGGTCAGACCAGGCATGAGACC 521005 Query 126118 CCGCTTCTTCAACCAGAAAATCGCACAAAATGAACCCGAGAAGAAGATTCCCTCCACACA 126177 ||||| || | ||| || || | | |||| || ||||||||||| || || ||| Sbjct 521004 ACGCTTTTTGAGCCAAAAGATGGAAGCGAATGCGCCAGAGAAGAAGATGCCTTCAACAGC 520945 Query 126178 CGCGAACGCAAAGAGACGCTCAGCAAAGGAGCGCGACTTTGTGTCAAA-CCACTTCATCG 126236 || || || | | ||| |||||||||| ||| | | || ||| ||||||||| | Sbjct 520944 AGCAAAGGCGACCAAACGTTCAGCAAAGG-TTGCGTCCTGGTCAGAAATCCACTTCATGG 520886 Query 126237 CCCA 126240 |||| Sbjct 520885 CCCA 520882 >seq1 Length=1854208 Score = 93.3 bits (102), Expect = 5e-14 Identities = 121/165 (73%), Gaps = 2/165 (1%) Strand=Plus/Minus Query 114759 CTGGGCAGAAGAGAGACCATTGACCACCCTCCTCAACACGCTTCATGAAGAGGTCTGGGA 114818 |||| ||||| | | ||| | |||| |||||| || |||| ||||||||| || |||| Sbjct 982439 CTGGACAGAACAAATGCCAATCACCATCCTCCTGGACGCGCTGCATGAAGAGATCGGGGA 982380 Query 114819 TCCAGAGAGCTGAGAAGAGATCCCG-ACAGCGAGCTTCTTCATCCCCCTGATTGAGACGC 114877 |||||||| || |||| || || || || ||| ||| |||| || ||| ||| Sbjct 982379 TCCAGAGACCTAAGAACAGGTCACGTGCACGGAG-TTCCTCATGGCCAGTATTCTTTCGC 982321 Query 114878 AACTCCAAAAAGTCCATGATATCCGCGTGCCACGGTTCCAGGTAC 114922 || |||||||| || | | |||||| ||||| || ||||| ||| Sbjct 982320 AAATCCAAAAATTCAAATACATCCGCATGCCAAGGCTCCAGATAC 982276 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 597352569565040