Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lobosporangium_20transversale_20[genbank_20GCA_5F002105155.1_202017- 04-20] 138 sequences; 42,768,949 total letters Query= NC_013668.3 Length=248526 Score E Sequences producing significant alignments: (Bits) Value seq57 111 3e-19 >seq57 Length=574579 Score = 111 bits (122), Expect = 3e-19 Identities = 344/524 (66%), Gaps = 19/524 (4%) Strand=Plus/Minus Query 159628 CTTCTTGTATTGCGACACATTCTTCTCGAAAAAGTTGGTCTTGCCCTCCATGGATATTGA 159687 ||||| ||| | ||| ||| |||||| || |||||||||||||||| | || || | Sbjct 521370 CTTCTGGTAATCCGAGACACGCTTCTCAAAGAAGTTGGTCTTGCCCTGAAGAGAGATCAA 521311 Query 159688 TTCCATGAACCCGAATGGGTTCTTCACGTGATAGCGCTTCGGAAATCCGAGAGCCGCCAG 159747 ||||| || | || || |||| || | || | || || |||||| || ||| Sbjct 521310 GTCCATAAAGTCAAAAGGATTCTCAACATTGTAATGTTTTGGGTTTCCGAGCGCGACCAA 521251 Query 159748 CAACCTGTCTGCCACAAATTCGATGTA--GCTACA-CATCTGCTCACAGTTGATCCCCAG 159804 | | || |||||||| || ||||| | | || || || || || || || | Sbjct 521250 GAGACGATCGGCCACAAACTCAATGTATTGTTTCATCAACTTGGCA---TTCATACCAAT 521194 Query 159805 CAGCCTAACGGGGAGCGCTTCCGACAGAAACTCCTTCTCAATCTCGACCGCTTCGGTCAC 159864 || | | || ||||| || || | || ||||| | || ||| | || || || || | Sbjct 521193 CAACATCACAGGGAGAGCATCGGTCAAGAACTCTTGTTCGATCACAACAGCCTCTGTAAT 521134 Query 159865 AATCTGCGAGACACGTTCGTACCCCGG-CTTG--CCCAA-AATGTGGTCCTTAAACAGGA 159920 || |||||||| | | || | | | ||| |||| | |||| | Sbjct 521133 GATAGCATTGACACGTTTTTGGTCAGGACGAGATCTCAACAATGAG-------AACAATA 521081 Query 159921 GGCACGCAAAGTCGCAGTGCAGTCCCTCGTCCCGAGAGATGAACTCGTTGGACATGATGA 159980 ||| || || || ||| || ||||| || || ||||||| |||||||| | | | | Sbjct 521080 AGCAGGCGAAATCAGTGTGGAGACCCTCATCACGCGAGATGAGTTCGTTGGAGAAGGTCA 521021 Query 159981 GGCCCGGCATGATCCCACGCGGTTTGAGCCAAAAAATGGCCGCAAAAGCACCGCTAAAAA 160040 | || ||||||| |||||| |||||||||||| |||| || || || || || | Sbjct 521020 GACCAGGCATGAGACCACGCTTTTTGAGCCAAAAGATGGAAGCGAATGCGCCAGAGAAGA 520961 Query 160041 AGATCCCCTCCACGGCCGCAAACGCCACGAGCCTCTCACCAAAAGAGGCGTTGGTGTCAT 160100 |||| || || || || ||||| || || | | ||| |||| | |||| |||| Sbjct 520960 AGATGCCTTCAACAGCAGCAAAGGCGACCAAACGTTCAGCAAAGGTTGCGTCCTGGTCAG 520901 Query 160101 GGGTCCACCTTTTGGCCCATTCAGCCTTCTTTGCG-ATGCACGG 160143 ||||| | ||||||| |||||||| ||||| ||||| || Sbjct 520900 AAATCCACTTCATGGCCCAGGCAGCCTTC-TTGCGAATGCAAGG 520858 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 795153828357280