Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lobosporangium_20transversale_20[genbank_20GCA_5F002105155.1_202017- 04-20] 138 sequences; 42,768,949 total letters Query= NC_014637.1 Length=617453 Score E Sequences producing significant alignments: (Bits) Value seq53 127 8e-24 seq64 114 5e-20 seq84 113 2e-19 seq103 111 6e-19 >seq53 Length=681236 Score = 127 bits (140), Expect = 8e-24 Identities = 156/213 (73%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 391046 TATAATGAATATTTTCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATC 391105 || |||| | ||||| || || ||||| || || || || |||||| | || || || || Sbjct 253270 TAAAATGCAGATTTTTGTCAAGACACTCACCGGCAAGACCATTACTTTGGAGGTAGAGTC 253211 Query 391106 ATCTGATAACATTGAAGCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGA 391165 || || | || || | ||||||| ||||| || || |||||||| |||||||| || Sbjct 253210 CTCCGACACTATCGACAATGTTAAACAGAAAATCCAGGACAAGGAAGGTATTCCTCCAGA 253151 Query 391166 TCAACAACGTTTAATTTTCTCAGGGAAACAACTTGAAGATGGAAGAACTTTGGCGGATTA 391225 || || ||| | || || | || || ||||||||||||||| | || | | ||||| Sbjct 253150 CCAGCAGCGTCTCATCTTTGCTGGAAAGCAACTTGAAGATGGACGTACGCTTTCCGATTA 253091 Query 391226 TAATATTGATAAGGATGCAACACTTCACTTAGT 391258 ||||||| | ||||| | || |||||||| || Sbjct 253090 TAATATTCAAAAGGAGTCGACCCTTCACTTGGT 253058 Score = 102 bits (112), Expect = 3e-16 Identities = 148/209 (71%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 391050 ATGAATATTTTCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCATCT 391109 ||| | |||||||| || || | || ||||||||||| ||| | || ||||| || || Sbjct 252582 ATGCAGATTTTCGTCAAGACTTTAACCGGTAAAACTATCACTTTGGAAGTTGAGTCCTCC 252523 Query 391110 GATAACATTGAAGCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGATCAA 391169 || | ||| || | || || || ||||| || |||||||| ||||| || || || Sbjct 252522 GACACCATCGATAACGTCAAGCAGAAGATTCAGGACAAGGAAGGTATTCCCCCAGACCAG 252463 Query 391170 CAACGTTTAATTTTCTCAGGGAAACAACTTGAAGATGGAAGAACTTTGGCGGATTATAAT 391229 || || | || ||| | || ||||| ||||||||||| | || | | || || ||| Sbjct 252462 CAGCGCCTCATCTTCGCCGGAAAACAGCTTGAAGATGGTCGTACGCTCTCTGACTACAAT 252403 Query 391230 ATTGATAAGGATGCAACACTTCACTTAGT 391258 || | ||||| | || |||||||| || Sbjct 252402 ATCCAAAAGGAGTCTACCCTTCACTTGGT 252374 Score = 102 bits (112), Expect = 3e-16 Identities = 148/209 (71%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 391050 ATGAATATTTTCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCATCT 391109 ||| | |||||||| || || | || ||||||||||| ||| | || ||||| || || Sbjct 253038 ATGCAGATTTTCGTCAAGACTTTAACCGGTAAAACTATCACTTTGGAAGTTGAGTCCTCC 252979 Query 391110 GATAACATTGAAGCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGATCAA 391169 || | ||| || | || || || ||||| || |||||||| ||||| || || || Sbjct 252978 GACACCATCGATAACGTCAAGCAGAAGATTCAGGACAAGGAAGGTATTCCCCCAGACCAG 252919 Query 391170 CAACGTTTAATTTTCTCAGGGAAACAACTTGAAGATGGAAGAACTTTGGCGGATTATAAT 391229 || || | || ||| | || ||||| ||||||||||| | || | | || || ||| Sbjct 252918 CAGCGCCTCATCTTCGCCGGAAAACAGCTTGAAGATGGTCGTACGCTCTCTGACTACAAT 252859 Query 391230 ATTGATAAGGATGCAACACTTCACTTAGT 391258 || | ||||| | || |||||||| || Sbjct 252858 ATCCAAAAGGAGTCTACCCTTCACTTGGT 252830 >seq64 Length=490145 Score = 114 bits (126), Expect = 5e-20 Identities = 274/411 (67%), Gaps = 5/411 (1%) Strand=Plus/Minus Query 451196 AAGCCCTATATTCAAGTAAATTATAAAGGTGAAACTAAAACTTTTGCTCCTGAAGAAATT 451255 ||||| ||||||||||| | || ||||| || | || ||| | || || || ||| Sbjct 349805 AAGCCTTATATTCAAGTTGAATACAAAGGAGAGAAGAAGGAATTTACCCCAGAGGAGATT 349746 Query 451256 TCATCTATGGTTCTTACTAAAATGAAAGAAACAGCAGAACAATATATTGGTTCTCCAGTT 451315 ||||| ||||| | || || ||| || || ||||| || ||||| || | || Sbjct 349745 TCATCCATGGTCTTGACCAAGATGCGTGAGACTGCAGAGGCTTACCTTGGTACTACCGTC 349686 Query 451316 ACTGATGCAGTAATTACTGTTCCCGCTTATTTCAATGATGCACAACGGCAAGCAACTAAA 451375 || |||| || | || || || || || || ||||| | || || || || || ||| Sbjct 349685 ACCAATGCTGTCGTCACCGTCCCTGCATACTTTAATGACTCTCAGCGTCAGGCCACAAAA 349626 Query 451376 GATGCAGGACATATTGCTGGTTTAAATGTTCTTCGAATTATTAATGAACCTACAGCAGCT 451435 || || || |||||||| | || |||| || || || || ||||| || |||||| Sbjct 349625 GACGCTGGTATGATTGCTGGAATGAACATTCTCCGTATCATCAACGAACCCACCGCAGCT 349566 Query 451436 GCTCTAGCATATGGACTAGGAAAATCAAAAGA-AACAGAAGaaaaaaaTATTTTAGTATT 451494 || | || ||||| | ||| | | |||| | ||| || || || || | | || Sbjct 349565 GCCATCGCCTATGG-TTTGGACA---AGAAGACAGCAGGCGAGAAGAACGTTCTCATCTT 349510 Query 451495 TGATTTTGGTGGAGGAACTCATGATACTTCTGTACTTTCAATTGAAGATGGGGTATTTGA 451554 |||| | ||||| || || ||| || | ||| | ||||| || || | || || Sbjct 349509 TGATCTCGGTGGTGGTACGTTCGATGTGTCCCTTCTTACTATTGAGGACGGTATCTTCGA 349450 Query 451555 AGTAAAGGCAACCAATGGTGATACTCATCTAGGAGGTGAAGATATTGATAA 451605 || ||||| || ||||| || ||| | ||||| |||||| | ||||| Sbjct 349449 GGTCAAGGCCACTGCCGGTGACACCCATTTGGGAGGAGAAGATTTCGATAA 349399 >seq84 Length=1068272 Score = 113 bits (124), Expect = 2e-19 Identities = 152/212 (72%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 391050 ATGAATATTTTCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCATCT 391109 ||| | |||||||| || || |||| || || || || || ||||| || ||||| ||| Sbjct 721356 ATGCAGATTTTCGTCAAGACCTTGACCGGCAAGACCATCACCCTTGAGGTCGAATCCTCT 721415 Query 391110 GATAACATTGAAGCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGATCAA 391169 |||| |||||| | | || || || || ||||||||||| || ||||| || || || Sbjct 721416 GATACCATTGACAATGTCAAGCAGAAGATCCAAGATAAGGAGGGTATTCCCCCAGACCAG 721475 Query 391170 CAACGTTTAATTTTCTCAGGGAAACAACTTGAAGATGGAAGAACTTTGGCGGATTATAAT 391229 || || | ||||| | || || || ||||| ||||| | || | | || ||||| Sbjct 721476 CAGCGCCTCATTTTTGCTGGCAAGCAGCTTGAGGATGGCCGTACCCTTTCTGACTATAAC 721535 Query 391230 ATTGATAAGGATGCAACACTTCACTTAGTATT 391261 ||| | ||||| | || ||||| || ||||| Sbjct 721536 ATTCAGAAGGAGTCCACCCTTCATTTGGTATT 721567 Score = 93.3 bits (102), Expect = 2e-13 Identities = 146/209 (70%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 391050 ATGAATATTTTCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCATCT 391109 ||| | |||||||| || || |||| || || || || || ||||| || || || ||| Sbjct 721128 ATGCAGATTTTCGTCAAGACCTTGACCGGCAAGACCATCACCCTTGAGGTCGAGTCCTCT 721187 Query 391110 GATAACATTGAAGCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGATCAA 391169 || | || || | || || || ||||||||||||||||| |||||||| || || Sbjct 721188 GACACGATCGATAACGTCAAGCAGAAGATTCAAGATAAGGAAGGCATTCCTCCAGACCAG 721247 Query 391170 CAACGTTTAATTTTCTCAGGGAAACAACTTGAAGATGGAAGAACTTTGGCGGATTATAAT 391229 || || | |||||| | || || || | |||||||| | || | | ||||| || Sbjct 721248 CAGCGCCTCATTTTCGCCGGCAAGCAGTTGGAAGATGGCCGTACCCTCTCCGATTACAAC 721307 Query 391230 ATTGATAAGGATGCAACACTTCACTTAGT 391258 || | ||||| | || || ||||| || Sbjct 721308 ATCCAGAAGGAGTCCACTCTCCACTTGGT 721336 >seq103 Length=208559 Score = 111 bits (122), Expect = 6e-19 Identities = 272/411 (66%), Gaps = 5/411 (1%) Strand=Plus/Plus Query 451196 AAGCCCTATATTCAAGTAAATTATAAAGGTGAAACTAAAACTTTTGCTCCTGAAGAAATT 451255 ||||| || || || || | | || || || || || || || | ||||| || ||| Sbjct 75674 AAGCCTTACATCCAGGTTGAATTCAAGGGCGAGACCAAGACCTTCACCCCTGAGGAGATT 75733 Query 451256 TCATCTATGGTTCTTACTAAAATGAAAGAAACAGCAGAACAATATATTGGTTCTCCAGTT 451315 || ||||||||| | | || ||| || || ||||| ||| | ||| | | || Sbjct 75734 TCCTCTATGGTTTTGTCCAAGATGCGTGAGACCGCAGAGTCTTATCTCGGTACCGCTGTC 75793 Query 451316 ACTGATGCAGTAATTACTGTTCCCGCTTATTTCAATGATGCACAACGGCAAGCAACTAAA 451375 || | || || ||||||| |||||||| |||||||| | || || || || || || Sbjct 75794 ACCAACGCTGTTGTTACTGTCCCCGCTTACTTCAATGACTCTCAGCGTCAGGCCACCAAG 75853 Query 451376 GATGCAGGACATATTGCTGGTTTAAATGTTCTTCGAATTATTAATGAACCTACAGCAGCT 451435 ||||| || || |||||| | || | ||||| || |||||||| || || || || Sbjct 75854 GATGCTGGTGCCATCGCTGGTATGAACATCCTTCGTATCATTAATGAGCCCACTGCCGCC 75913 Query 451436 GCTCTAGCATATGGACTAGGAAAATCAAAAGAAA-CAGAAGaaaaaaaTATTTTAGTATT 451494 || | || || || | | || | |||| | | ||| || || | | | || Sbjct 75914 GCCATCGCCTACGGTTTGG----ATAAGAAGACCGCCGGAGAGAAGAACGTCCTCATTTT 75969 Query 451495 TGATTTTGGTGGAGGAACTCATGATACTTCTGTACTTTCAATTGAAGATGGGGTATTTGA 451554 ||| ||||||| || ||| ||| || | || | ||||||||||| | || || Sbjct 75970 CGATCTTGGTGGTGGTACTTTCGATGTGTCACTCCTCACCATTGAAGATGGTATCTTCGA 76029 Query 451555 AGTAAAGGCAACCAATGGTGATACTCATCTAGGAGGTGAAGATATTGATAA 451605 || ||||| ||| |||||| ||||| | ||||| || ||| | || || Sbjct 76030 GGTCAAGGCCACCGCTGGTGACACTCACTTGGGAGGAGAGGATTTCGACAA 76080 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1975714906682904