Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lobosporangium_20transversale_20[genbank_20GCA_5F002105155.1_202017- 04-20] 138 sequences; 42,768,949 total letters Query= NC_014649.1 Length=1181549 Score E Sequences producing significant alignments: (Bits) Value seq110 197 1e-44 seq73 98.7 8e-15 seq48 98.7 8e-15 seq31 98.7 8e-15 >seq110 Length=152350 Score = 197 bits (218), Expect = 1e-44 Identities = 533/807 (66%), Gaps = 14/807 (2%) Strand=Plus/Plus Query 517853 TCAATTCCTTCGAACAAAGAATCAACTTCAATCGTAGTTTGAGTCGAAGAAGATAGTGCA 517912 |||| || ||||||||||| || |||||||| || ||||||| | | ||||||| | Sbjct 53187 TCAACACCCTCGAACAAAGAGTCGACTTCAATGGTGGTTTGAGCCAATGAAGATAAGGTG 53246 Query 517913 CGTTTAGCACGTTCACATGCTGTCCTTAGTCTTCGTAAGGCTTTTGCTGATTGATTCAAA 517972 || || |||||||| || || || | || | || ||| || | | Sbjct 53247 CGCTTGGCACGTTCGCAAGCAGTGCGAAGACGGCGGGTGGCACGAGCATCACCAGAGATG 53306 Query 517973 TCTGTTTTATATTTTCTCTTGAAATCTTCAACACACCATGTTACAAGACGA---TTATCA 518029 || | || | || | |||||| || || | ||||| ||||| || ||||| Sbjct 53307 TCCTTCTTGTGCTTGCGCTTGAACTCCTCCTTGAA--ATGTTCCAAGA-GAGTGTTATCG 53363 Query 518030 AAATCTTCACCTCCCAATTTAGTATTTCCTGACGTAGCTCTTACTTGGAAAAGTCCATCT 518089 ||||||||||||||||| | ||||| ||| | || || | || ||| | || || Sbjct 53364 AAATCTTCACCTCCCAAGTGAGTATCTCCAGCTGTGGCCTTGACGGCGAAGA---CACCT 53420 Query 518090 TCAA-GA--GACAAAAGAGTTACATCATGGGTTCCACCACCCATATCAAAAATAAGTACA 518146 || || | |||||||| ||||| || || ||||| | ||| |||||||| || Sbjct 53421 CCAGTGATGGTCAAAAGAGAGACATCGAACGTACCGCCACCAAGATCGAAAATAAGAACG 53480 Query 518147 TTCATTTCTTTGTCTTGGTTTTTATCAAGACCATACGCAAAAGCAGCAGCAGTTGGTTCA 518206 | | | || ||| | || ||| | |||||| || | ||| ||||| ||||| || Sbjct 53481 TGCTTCTCCTTGGTCTCCTTAGAATCCAAACCATAGGCGATAGCGGCAGCGGTTGGCTCG 53540 Query 518207 TTAATAATTCTCAAAACATTAAGACCAGCAATTCTTCCTGCATCTTTAGTGGCTTGTCTT 518266 |||||||| | | ||||| |||||||||||| || || || |||||||| || | Sbjct 53541 TTAATAATACGGAGAACATCAAGACCAGCAATGGCACCAGCGTCCTTAGTGGCGTGACGC 53600 Query 518267 TGTGAATCGTTAAAATATGCAGGAACAGTAATAACGGCATCAGTTACTTCTTTACCAATA 518326 || | |||||| || || ||||||||||| || || || | ||| | || || | Sbjct 53601 TGAGCATCGTTGAAGTAGGCAGGAACAGTGATGACAGCCTTAGTGATAGTCTTGCCGAGC 53660 Query 518327 TAAGCGCTTGCCGTTTGTTTCATTTTACTTAAAATCATTGATGAAATTTGTTCTGGGGAA 518386 | || || | | |||||| || | || | ||| | || || | | ||||| Sbjct 53661 TTGGCCTCAGCGATCTCTTTCATCTTTGTCAAGACCATGGCAGAGATCTCCTGAGGGGAG 53720 Query 518387 TATTGCTTGGATTCATTTTGATATGATACTTCAAAATATGGTTTATTACCAACATTAATA 518446 ||| ||| ||| ||||| || | || | || | | | | ||| Sbjct 53721 AATTCCTTCTTCTCACCCTGATAGTCAACCTGAACGAAGGGAGCAGTGTCCTTCTCAATG 53780 Query 518447 ACTTTAAATGGCCAGTATTTCATATCTG-ATTGAACACTTTGGTCATTAAAATCTCTACC 518505 || | || ||||||| ||||| || | |||| | | |||||| || | ||| Sbjct 53781 ACAGTGAAGGGCCAGTGCTTCATGTCAGCCTTGACCTC-AGGGTCATCGAAGCGGCGACC 53839 Query 518506 AATTAATCGTTTTGCATCAAAAATAGTATTGGTTGGATTAATTGCAGCTTGATATTTGGC 518565 || | || || ||||| |||| ||| |||||||| || || ||||| |||| ||||| Sbjct 53840 GATAAGACGCTTGGCATCGAAAACAGTGTTGGTTGGGTTCATAGCAGCCTGATTCTTGGC 53899 Query 518566 TGCATCTCCAATCAGATGTTCTGTCTCTGTAAATGAAACATATGATGGAGTTGTGCGATT 518625 ||||| ||||| ||| |||| | || | || | |||||||||||| ||||| || || Sbjct 53900 AGCATCACCAATAAGACGTTCCGAGTCGGAGAAGGCAACATATGATGGTGTTGTACGGTT 53959 Query 518626 ACCTTGATCATTCGCAATAATTTCAAC 518652 |||||| || || ||||| || ||||| Sbjct 53960 ACCTTGCTCGTTAGCAATGATCTCAAC 53986 >seq73 Length=1354255 Score = 98.7 bits (108), Expect = 8e-15 Identities = 148/209 (71%), Gaps = 6/209 (3%) Strand=Plus/Minus Query 518447 ACTTTAAATGGCCAGTATTTCATATCTGATTGAACACTTTGGTCATTAAAATCTCTACCA 518506 ||||| ||||| ||| || ||||| || ||| | |||| ||| | |||| Sbjct 1352400 ACTTTGAATGGGAAGTGCTTAATATCATTCTGGACATCCTTATCATCGAAACGGCGACCA 1352341 Query 518507 ATTAATCGTTTTGCATCAAAAATAGTATTGGTTGGATTAATTGCAGCTT---GATATTTG 518563 || | ||||| ||||||||||| || ||||| || || ||||| | ||| ||| Sbjct 1352340 ATCAGACGTTTGGCATCAAAAATTGTGTTGGTGGGGTTG---GCAGCGTACTGATTCTTG 1352284 Query 518564 GCTGCATCTCCAATCAGATGTTCTGTCTCTGTAAATGAAACATATGATGGAGTTGTGCGA 518623 || |||||||| | ||| | || ||| || |||| ||||| || ||||| | ||| Sbjct 1352283 GCGGCATCTCCGACAAGACGCTCGTCCTCAGTGAATGCGACATAGGAGGGAGTGATACGA 1352224 Query 518624 TTACCTTGATCATTCGCAATAATTTCAAC 518652 | |||||||||||| || ||||||||||| Sbjct 1352223 TGACCTTGATCATTGGCGATAATTTCAAC 1352195 >seq48 Length=811349 Score = 98.7 bits (108), Expect = 8e-15 Identities = 148/209 (71%), Gaps = 6/209 (3%) Strand=Plus/Minus Query 518447 ACTTTAAATGGCCAGTATTTCATATCTGATTGAACACTTTGGTCATTAAAATCTCTACCA 518506 ||||| ||||| ||| || ||||| || ||| | |||| ||| | |||| Sbjct 8459 ACTTTGAATGGGAAGTGCTTAATATCATTCTGGACATCCTTATCATCGAAACGGCGACCA 8400 Query 518507 ATTAATCGTTTTGCATCAAAAATAGTATTGGTTGGATTAATTGCAGCTT---GATATTTG 518563 || | ||||| ||||||||||| || ||||| || || ||||| | ||| ||| Sbjct 8399 ATCAGACGTTTGGCATCAAAAATTGTGTTGGTGGGGTTG---GCAGCGTACTGATTCTTG 8343 Query 518564 GCTGCATCTCCAATCAGATGTTCTGTCTCTGTAAATGAAACATATGATGGAGTTGTGCGA 518623 || |||||||| | ||| | || ||| || |||| ||||| || ||||| | ||| Sbjct 8342 GCGGCATCTCCGACAAGACGCTCGTCCTCAGTGAATGCGACATAGGAGGGAGTGATACGA 8283 Query 518624 TTACCTTGATCATTCGCAATAATTTCAAC 518652 | |||||||||||| || ||||||||||| Sbjct 8282 TGACCTTGATCATTGGCGATAATTTCAAC 8254 >seq31 Length=10751 Score = 98.7 bits (108), Expect = 8e-15 Identities = 148/209 (71%), Gaps = 5/209 (2%) Strand=Plus/Plus Query 518447 ACTTTAAATGGCCAGTATTTCATATCTGATTGAACACTTTGGTCATTAAAATCTCTACCA 518506 ||||| ||||| ||| || ||||| || ||| | |||| ||| | |||| Sbjct 2297 ACTTTGAATGGGAAGTGCTTAATATCATTCTGGACATCCTTATCATCGAAACGGCGACCA 2356 Query 518507 ATTAATCGTTTTGCATCAAAAATAGTATTGGTTGGATTAATTGCAGCTT---GATATTTG 518563 || | ||||| ||||||||||| || |||| ||| | | ||||| | ||| ||| Sbjct 2357 ATCAGACGTTTGGCATCAAAAATTGTGTTGGGTGGGGT--TGGCAGCGTACTGATTCTTG 2414 Query 518564 GCTGCATCTCCAATCAGATGTTCTGTCTCTGTAAATGAAACATATGATGGAGTTGTGCGA 518623 || |||||||| | ||| | || ||| || |||| ||||| || ||||| | ||| Sbjct 2415 GCGGCATCTCCGACAAGACGCTCGTCCTCAGTGAATGCGACATAGGAGGGAGTGATACGA 2474 Query 518624 TTACCTTGATCATTCGCAATAATTTCAAC 518652 | |||||||||||| || ||||||||||| Sbjct 2475 TGACCTTGATCATTGGCGATAATTTCAAC 2503 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 3780815551985428