Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lobosporangium_20transversale_20[genbank_20GCA_5F002105155.1_202017- 04-20] 138 sequences; 42,768,949 total letters Query= NC_016072.1 Length=1259197 Score E Sequences producing significant alignments: (Bits) Value seq64 176 4e-38 seq73 118 9e-21 seq48 118 9e-21 seq103 111 1e-18 seq53 105 5e-17 seq31 102 7e-16 >seq64 Length=490145 Score = 176 bits (194), Expect = 4e-38 Identities = 463/707 (65%), Gaps = 0/707 (0%) Strand=Plus/Minus Query 551895 GCTCTTCGTCGTCTAAGAACTGCTTGCGAAAGAGCCAAACGAGCTCTTTCATCTGGTACT 551954 ||||| |||||||| | ||||| || ||| | || || || | || ||||| | || Sbjct 349328 GCTCTCCGTCGTCTTCGTACTGCCTGTGAACGTGCTAAGCGTTCCCTGTCATCCTCTGCT 349269 Query 551955 CAAACCACTATTGAAGTAGATTCATTATTTGAGGGAATTGATTATAATACGCCTATTTCG 552014 ||||| | ||||| | || || | |||||||| ||||||| |||| | | | Sbjct 349268 CAAACTTCCATTGAGATTGACTCCCTCTTTGAGGGTATTGATTTCTATACTTCCTTGACC 349209 Query 552015 AGGGCCAAATTTGAAGATATTTGTTCTGATCTCTTTAGAAAAACAATTGAACCAGTAGAA 552074 | || || || || | |||||||| | || || || || || || || Sbjct 349208 CGTGCTCGTTTCGAGGAGCTCAACCAGGATCTCTTCCGCAACACCATGGAGCCCGTTGAG 349149 Query 552075 CAAGTTTTAAGAGATTCAAAGATTGATAAATCCAAAGTACATGAAATTGTGCTTGTTGGT 552134 | ||| | | ||||| ||||| |||||| | || | || ||||| ||||| ||| Sbjct 349148 AAGGTTCTTCGCGATTCTAAGATCGATAAAGGCGCTGTTGACGAGATTGTCCTTGTCGGT 349089 Query 552135 GGATCTACAAGAATTCCTAAAATTCGCGAAATGTTAAGTTCTTATTTCAATGGTAAAAAA 552194 || || || | || || || || | | ||| | | | ||||| ||||| | Sbjct 349088 GGTTCCACCCGTATCCCCAAGATCCAAAAGATGGTCTCTGACTTCTTCAACGGTAAGGAG 349029 Query 552195 TTAAATGAAAGTGTTAATCCAGATGAGGCTGTTGCCTATGGTGCCGCAATTCAAGCAGCT 552254 || | | | || |||||||| || ||||||||||||||||| | || || || Sbjct 349028 CCCAACAAGTCTATCAACCCAGATGAAGCCGTTGCCTATGGTGCCGCTGTCCAGGCTGCG 348969 Query 552255 ATTCTTTCTGGACAAACTGATGAAAAACTACAAAATATTGTACTTGTAGATGTTACTCCT 552314 ||| | | || | ||| || || || | || | || | ||||| ||||| Sbjct 348968 ATTTTGACCGGCGATACTTCCGAGAAGACCCAGGACCTTCTCCTGCTCGATGTCGCTCCT 348909 Query 552315 CTATCTCTTGGTTTAGAAACAGTTGGAGGTATTATGACTAATCTTATCGATAGAAATACT 552374 || ||||||||| | || || | |||||| | |||||| |||||| | | ||||| Sbjct 348908 CTGTCTCTTGGTATTGAGACCGCAGGAGGTGTCATGACTGCCCTTATCAAACGTAATACC 348849 Query 552375 ACTATTCCTTGTAAAAAATCTCGTGTATTTTCTACGTATTCAGATAATCAAACTGCTGTT 552434 ||| |||| ||| ||||| ||| ||||| ||| | ||||| || ||| ||| Sbjct 348848 ACTGTTCCCACTAAGAAATCAGAGACATTCTCTACCTATGCTGATAACCAGCCTGGCGTT 348789 Query 552435 ACAATTCAAATTTTTGAAGGAGAAAGAAAATTCACTAAAGATAATAATCAACTTGGTACT 552494 |||||| | | |||||| || | ||| ||||||||||| || || | Sbjct 348788 TTGATTCAAGTCTATGAAGGTGAGCGTGCTCGCACCAAAGATAATAACTTGCTCGGCAAG 348729 Query 552495 TTTAATTTAGAAGGTATTCCTCCTGCTCCTCGTGGAGTACCGCAAATTGAAGTTACTTTC 552554 || | | |||||||||||| || |||||||| || || || || || || |||| Sbjct 348728 TTCGAGCTCACAGGTATTCCTCCCGCACCTCGTGGTGTTCCTCAGATCGAGGTCGTTTTC 348669 Query 552555 GATATCGATGCCAATGGAATTTTGAATGTGACTGCTTGTGATAAATC 552601 ||||| |||||||| || |||||||| || ||||| ||| ||||| Sbjct 348668 GATATTGATGCCAACGGTATTTTGAACGTCTCTGCTGCTGAGAAATC 348622 Score = 159 bits (176), Expect = 3e-33 Identities = 363/543 (67%), Gaps = 10/543 (2%) Strand=Plus/Minus Query 549990 TAGCTATAGGTATAGATTTAGGAACCACATATAGTTGTGTTGGTGTTTGGCAAAATGGTA 550049 |||| | ||||| ||| | ||||| || || |||||| | ||||||||| || | Sbjct 350089 TAGCCGTCGGTATCGATCTCGGAACTACTTACTCTTGTGTAGCTGTTTGGCAGAACGACC 350030 Query 550050 AAGTTGAAATTATTGCCAATGATCAAGGTAACAGAACTACTCCATCTTATGTTTCTTTCA 550109 ||||| || || |||||||| || |||||| | || || || || |||||| | |||| Sbjct 350029 GTGTTGAGATCATCGCCAATGACCAGGGTAACCGCACAACCCCCTCCTATGTTGCCTTCA 349970 Query 550110 CGGAAACTGAACATTTAGTTGGTGATGCAGCAAAATATCAAGC--CACTGGTAATCCTAC 550167 | || ||||| | | | | || ||||| || || |||||| || || || || || Sbjct 349969 CTGACACTGAGCGTCTCATCGGAGATGCTGCCAAGAATCAAGTAGCAATG--AACCCGAC 349912 Query 550168 CAATACTATTTTTGATGCTAAACGTTTAATTGGAAGAAGTTTTAATGATTCGACTGTTCA 550227 ||| ||| | || || || || || || || || | | || | ||| ||| || Sbjct 349911 CAACACTGTGTTCGACGCCAAGCGCTTGATCGGTCGCCGCTTCGACGATAAAGATGTCCA 349852 Query 550228 GGCAGATATGAAGCATTGGCCTTTCCA---AATTGTTAATGTTTCTGGAAAACCTTATAT 550284 | |||||||| ||||||||||| | || | || | || || |||||||| Sbjct 349851 ATCTGATATGAAACATTGGCCTTTTAAGGTCATCGAAAAGG---CTACCAAGCCTTATAT 349795 Query 550285 TGAAGCTACTCATGAAGGATCTGTTAAACAATTTTCACCAGAACAAATTTCATCTATGGT 550344 | ||| | | ||||| || ||||| | ||||| | |||||||| ||||| Sbjct 349794 TCAAGTTGAATACAAAGGAGAGAAGAAGGAATTTACCCCAGAGGAGATTTCATCCATGGT 349735 Query 550345 TTTAATGAAAATGAAACAAACAGCCAGTGCTTTTGTTGGTCAAGAAGTTACGGATGCAGT 550404 || | || ||| | || || |||| ||||| || || |||| || Sbjct 349734 CTTGACCAAGATGCGTGAGACTGCAGAGGCTTACCTTGGTACTACCGTCACCAATGCTGT 349675 Query 550405 AATAACTGTACCAGCATATTTTAATGACTCACAACGTCAAGCTACTAAAGATGCTGGACG 550464 | || || || ||||| ||||||||||| || ||||| || || ||||| ||||| Sbjct 349674 CGTCACCGTCCCTGCATACTTTAATGACTCTCAGCGTCAGGCCACAAAAGACGCTGGTAT 349615 Query 550465 TATTGCTGGACTTAATGTTCTTCGTATTATCAATGAACCTACTGCTGCTGCACTTGCATA 550524 ||||||||| | || |||| ||||| ||||| ||||| || || ||||| | || || Sbjct 349614 GATTGCTGGAATGAACATTCTCCGTATCATCAACGAACCCACCGCAGCTGCCATCGCCTA 349555 Query 550525 TGG 550527 ||| Sbjct 349554 TGG 349552 >seq73 Length=1354255 Score = 118 bits (130), Expect = 9e-21 Identities = 353/535 (66%), Gaps = 16/535 (3%) Strand=Plus/Plus Query 550001 ATAGATTTAGGAACCACATATAGTTGTGTTGGTGTTTGGCAAAATGGTAAAGTTGAAATT 550060 |||||| | |||||||| || ||||| || || | | ||||| ||||||||| Sbjct 1352144 ATAGATCTTGGAACCACCTACTCCTGTGTCGGCGTCTACAAGAATGGACGCGTTGAAATT 1352203 Query 550061 ATTGCCAATGATCAAGGTAACAGAACTACTCCATCTTATGTTTCTTTCACGGAAACTGAA 550120 || ||||||||||||||| | | | ||||| || ||||| | ||||| || || Sbjct 1352204 ATCGCCAATGATCAAGGTCATCGTATCACTCCCTCCTATGTCGCATTCACTGAGGACGAG 1352263 Query 550121 CATTTAGTTGGTGATGCAGCAAAATATCAAGCCACTGGTAATCCTACCAATACTATTTTT 550180 | | | || || ||||| || || |||| | ||| || || ||||| || |||||| Sbjct 1352264 CGTCTTGTCGGAGATGCCGCCAAGAATCAGTACGCTGCCAACCCCACCAACACAATTTTT 1352323 Query 550181 GATGCTAAACGTTTAATTGGAAGAAGTTTTAATGATTCGACTGTTCAGGCAGATATGAAG 550240 ||||| |||||| | ||||| | |||| ||||| | ||| ||| ||||| ||| Sbjct 1352324 GATGCCAAACGTCTGATTGGTCGCCGTTTCGATGATAAGGATGTCCAGAATGATATTAAG 1352383 Query 550241 CATTGGCCTTTCCA----AATTGTTAATGTTTCTGGAAAACCTTATATTGAAG-CTA-CT 550294 || | || ||| | || | || | ||| ||| || | | | | | Sbjct 1352384 CACTTCCCATTCAAAGTCAAGAGCAAAGG----TGGCGCTCCTGTCATCCAGGTCGAGGT 1352439 Query 550295 CATGAAGGATCTGTTAAACA-ATTTTCACCAGAACAAATTTCATCTATGGTTTTAATGAA 550353 || ||||| | ||| | || | || || | ||||| |||||||||| || Sbjct 1352440 CA--AAGGA-GAGCCAAAGACCTTCACGCCTGAGGAGATTTCCGCTATGGTTTTGGGCAA 1352496 Query 550354 AATGAAACAAACAGCCAGTGCTTTTGTTGGTCAAGAA-GTTACGGATGCAGTAATAACTG 550412 ||||| | | ||| || || || |||||| ||||| | || || | |||| Sbjct 1352497 GATGAAGGAGATTGCCGAAGCCTTCCTT-TCCAAGAAGGTTACCCACGCCGTCGTCACTG 1352555 Query 550413 TACCAGCATATTTTAATGACTCACAACGTCAAGCTACTAAAGATGCTGGACGTATTGCTG 550472 | || || || || || ||| | || ||||| |||||||| ||||| || |||||||| Sbjct 1352556 TCCCCGCCTACTTCAACGACGCTCAGCGTCAGGCTACTAAGGATGCCGGTGCTATTGCTG 1352615 Query 550473 GACTTAATGTTCTTCGTATTATCAATGAACCTACTGCTGCTGCACTTGCATATGG 550527 | | || || || |||||| |||| ||||| || || || ||| | || || || Sbjct 1352616 GCTTGAACGTCCTCCGTATTGTCAACGAACCCACCGCCGCCGCAATCGCTTACGG 1352670 >seq48 Length=811349 Score = 118 bits (130), Expect = 9e-21 Identities = 353/535 (66%), Gaps = 16/535 (3%) Strand=Plus/Plus Query 550001 ATAGATTTAGGAACCACATATAGTTGTGTTGGTGTTTGGCAAAATGGTAAAGTTGAAATT 550060 |||||| | |||||||| || ||||| || || | | ||||| ||||||||| Sbjct 8203 ATAGATCTTGGAACCACCTACTCCTGTGTCGGCGTCTACAAGAATGGACGCGTTGAAATT 8262 Query 550061 ATTGCCAATGATCAAGGTAACAGAACTACTCCATCTTATGTTTCTTTCACGGAAACTGAA 550120 || ||||||||||||||| | | | ||||| || ||||| | ||||| || || Sbjct 8263 ATCGCCAATGATCAAGGTCATCGTATCACTCCCTCCTATGTCGCATTCACTGAGGACGAG 8322 Query 550121 CATTTAGTTGGTGATGCAGCAAAATATCAAGCCACTGGTAATCCTACCAATACTATTTTT 550180 | | | || || ||||| || || |||| | ||| || || ||||| || |||||| Sbjct 8323 CGTCTTGTCGGAGATGCCGCCAAGAATCAGTACGCTGCCAACCCCACCAACACAATTTTT 8382 Query 550181 GATGCTAAACGTTTAATTGGAAGAAGTTTTAATGATTCGACTGTTCAGGCAGATATGAAG 550240 ||||| |||||| | ||||| | |||| ||||| | ||| ||| ||||| ||| Sbjct 8383 GATGCCAAACGTCTGATTGGTCGCCGTTTCGATGATAAGGATGTCCAGAATGATATTAAG 8442 Query 550241 CATTGGCCTTTCCA----AATTGTTAATGTTTCTGGAAAACCTTATATTGAAG-CTA-CT 550294 || | || ||| | || | || | ||| ||| || | | | | | Sbjct 8443 CACTTCCCATTCAAAGTCAAGAGCAAAGG----TGGCGCTCCTGTCATCCAGGTCGAGGT 8498 Query 550295 CATGAAGGATCTGTTAAACA-ATTTTCACCAGAACAAATTTCATCTATGGTTTTAATGAA 550353 || ||||| | ||| | || | || || | ||||| |||||||||| || Sbjct 8499 CA--AAGGA-GAGCCAAAGACCTTCACGCCTGAGGAGATTTCCGCTATGGTTTTGGGCAA 8555 Query 550354 AATGAAACAAACAGCCAGTGCTTTTGTTGGTCAAGAA-GTTACGGATGCAGTAATAACTG 550412 ||||| | | ||| || || || |||||| ||||| | || || | |||| Sbjct 8556 GATGAAGGAGATTGCCGAAGCCTTCCTT-TCCAAGAAGGTTACCCACGCCGTCGTCACTG 8614 Query 550413 TACCAGCATATTTTAATGACTCACAACGTCAAGCTACTAAAGATGCTGGACGTATTGCTG 550472 | || || || || || ||| | || ||||| |||||||| ||||| || |||||||| Sbjct 8615 TCCCCGCCTACTTCAACGACGCTCAGCGTCAGGCTACTAAGGATGCCGGTGCTATTGCTG 8674 Query 550473 GACTTAATGTTCTTCGTATTATCAATGAACCTACTGCTGCTGCACTTGCATATGG 550527 | | || || || |||||| |||| ||||| || || || ||| | || || || Sbjct 8675 GCTTGAACGTCCTCCGTATTGTCAACGAACCCACCGCCGCCGCAATCGCTTACGG 8729 >seq103 Length=208559 Score = 111 bits (122), Expect = 1e-18 Identities = 361/553 (65%), Gaps = 12/553 (2%) Strand=Plus/Plus Query 549990 TAGCTATAGGTATAGATTTAGGAACCACATATAGTTGTGTTGGTGTTTGGCAAAATGGTA 550049 ||||| | ||||| ||| | || || || || ||| |||| || |||||||| | Sbjct 75390 TAGCTGTCGGTATCGATCTCGGTACTACCTACTCTTGCGTTGCCGTCTGGCAAAACGACC 75449 Query 550050 AAGTTGAAATTATTGCCAATGATCAAGGTAACAGAACTACTCCATCTTATGTTTCTTTCA 550109 || |||||||| ||||| ||||| |||||| | || ||||| || ||||| | |||| Sbjct 75450 GTGTCGAAATTATCGCCAACGATCAGGGTAACCGCACCACTCCCTCATATGTAGCCTTCA 75509 Query 550110 CGGAAACTGAACATTTAGTTGGTGATGCAGCAAAATATCAAGCCACTGGTAATCCTACCA 550169 | || | || | | | | |||||||| || || | || | | | || || | || Sbjct 75510 CCGATAGCGAGCGTCTCATCGGTGATGCTGCTAAGAACCAGGTCGCCATGAACCCCATCA 75569 Query 550170 ATACTATTTTTGATGCTAAACGTTTAATTGGAAGAAGTTTTAATGATTCGACTGTTCAGG 550229 | ||| |||| ||||| || || | || || | |||| |||| | ||||||| Sbjct 75570 ACACTGTTTTCGATGCCAAGCGCCTTATCGGTCGCCGTTTCGATGACAAGGATGTTCAGT 75629 Query 550230 CAGATATGAAGCATTGGCCTTTCCAAATTGT---TAATGTTTCTGGAAAACCTTATATTG 550286 | ||||||||||| ||||| ||| | | || || | || || ||||| || Sbjct 75630 CTGATATGAAGCACTGGCCCTTCAAGGTCGTCGATAGGGGCACT---AAGCCTTACATCC 75686 Query 550287 AAGCT-ACTCATGAAGGATCTGTTAAACA-ATTTTCACCAGAACAAATTTCATCTATGGT 550344 | | | | | | |||| | || | || | || || | ||||| |||||||| Sbjct 75687 AGGTTGAAT--TCAAGGGCGAGACCAAGACCTTCACCCCTGAGGAGATTTCCTCTATGGT 75744 Query 550345 TTTAATGAAAATGAAACAAACAGC-CAGTGCTTTTGTTGGTCAAGAAGTTACGGATGCAG 550403 ||| || ||| | || || ||| ||| | | ||| | || || | || | Sbjct 75745 TTTGTCCAAGATGCGTGAGACCGCAGAGT-CTTATCTCGGTACCGCTGTCACCAACGCTG 75803 Query 550404 TAATAACTGTACCAGCATATTTTAATGACTCACAACGTCAAGCTACTAAAGATGCTGGAC 550463 | | ||||| || || || || |||||||| || ||||| || || || |||||||| Sbjct 75804 TTGTTACTGTCCCCGCTTACTTCAATGACTCTCAGCGTCAGGCCACCAAGGATGCTGGTG 75863 Query 550464 GTATTGCTGGACTTAATGTTCTTCGTATTATCAATGAACCTACTGCTGCTGCACTTGCAT 550523 || ||||| | || | |||||||| || ||||| || ||||| || || | || | Sbjct 75864 CCATCGCTGGTATGAACATCCTTCGTATCATTAATGAGCCCACTGCCGCCGCCATCGCCT 75923 Query 550524 ATGGACTTGATAA 550536 | || | ||||| Sbjct 75924 ACGGTTTGGATAA 75936 >seq53 Length=681236 Score = 105 bits (116), Expect = 5e-17 Identities = 160/223 (72%), Gaps = 6/223 (3%) Strand=Plus/Plus Query 563256 GAGACGGAGTACAAGATGAAGGGTACTTTC--TTTGGTAATATTGTAATCAGCTAGAGTT 563313 |||||| || || | ||||||||| || ||||| |||||||| |||| || || Sbjct 252364 GAGACGAAGGACCAAGTGAAGGGTAGACTCCTTTTGG--ATATTGTAGTCAGAGAGCGTA 252421 Query 563314 CTTGAATCTTCAAGTTGTTTTCCGGCAAAAATAAGTCTTTGCTGATCAGGAGGAATTCCT 563373 | ||||||||| ||||||||||| || || || | ||||| || || ||||| ||| Sbjct 252422 CGACCATCTTCAAGCTGTTTTCCGGCGAAGATGAGGCGCTGCTGGTCTGGGGGAATACCT 252481 Query 563374 TCTTTATCTTGAATTTTTTGTTTTACTGCCTCAATTGTATCAGTGTGAGT-ACATTCGAG 563432 || || || ||||| || || || || || || || || | | || | | ||| | Sbjct 252482 TCCTTGTCCTGAATCTTCTGCTTGACGTTATCGATGGTGTCGGAG-GACTCAACTTCCAA 252540 Query 563433 AGTAACAGTTTTACCAGTAAGAGTTTTAACGAAAATTTGCATA 563475 ||| | ||||||||| || | ||| || |||||||| |||||| Sbjct 252541 AGTGATAGTTTTACCGGTTAAAGTCTTGACGAAAATCTGCATA 252583 Score = 105 bits (116), Expect = 5e-17 Identities = 160/223 (72%), Gaps = 6/223 (3%) Strand=Plus/Plus Query 563256 GAGACGGAGTACAAGATGAAGGGTACTTTC--TTTGGTAATATTGTAATCAGCTAGAGTT 563313 |||||| || || | ||||||||| || ||||| |||||||| |||| || || Sbjct 252820 GAGACGAAGGACCAAGTGAAGGGTAGACTCCTTTTGG--ATATTGTAGTCAGAGAGCGTA 252877 Query 563314 CTTGAATCTTCAAGTTGTTTTCCGGCAAAAATAAGTCTTTGCTGATCAGGAGGAATTCCT 563373 | ||||||||| ||||||||||| || || || | ||||| || || ||||| ||| Sbjct 252878 CGACCATCTTCAAGCTGTTTTCCGGCGAAGATGAGGCGCTGCTGGTCTGGGGGAATACCT 252937 Query 563374 TCTTTATCTTGAATTTTTTGTTTTACTGCCTCAATTGTATCAGTGTGAGT-ACATTCGAG 563432 || || || ||||| || || || || || || || || | | || | | ||| | Sbjct 252938 TCCTTGTCCTGAATCTTCTGCTTGACGTTATCGATGGTGTCGGAG-GACTCAACTTCCAA 252996 Query 563433 AGTAACAGTTTTACCAGTAAGAGTTTTAACGAAAATTTGCATA 563475 ||| | ||||||||| || | ||| || |||||||| |||||| Sbjct 252997 AGTGATAGTTTTACCGGTTAAAGTCTTGACGAAAATCTGCATA 253039 Score = 100 bits (110), Expect = 2e-15 Identities = 158/222 (71%), Gaps = 6/222 (3%) Strand=Plus/Plus Query 563257 AGACGGAGTACAAGATGAAGGGTACTTTC--TTTGGTAATATTGTAATCAGCTAGAGTTC 563314 ||||| || || | ||||||||| || ||||| |||||||| |||| || || | Sbjct 252137 AGACGAAGGACCAAGTGAAGGGTAGACTCCTTTTGG--ATATTGTAGTCAGAGAGCGTGC 252194 Query 563315 TTGAATCTTCAAGTTGTTTTCCGGCAAAAATAAGTCTTTGCTGATCAGGAGGAATTCCTT 563374 ||| ||||| ||||||||||| |||||||| | ||||| || |||||||| |||| Sbjct 252195 GACCATCCTCAAGCTGTTTTCCGGCGAAAATAAGACGCTGCTGGTCTGGAGGAATACCTT 252254 Query 563375 CTTTATCTTGAATTTTTTGTTTTACTGCCTCAATTGTATCAGTGTGAGT-ACATTCGAGA 563433 | || || ||||| || || || || || || || || | || | | ||| | | Sbjct 252255 CCTTGTCCTGAATCTTCTGCTTGACGTTGTCGATGGTGTC-GGAAGACTCAACTTCCAAA 252313 Query 563434 GTAACAGTTTTACCAGTAAGAGTTTTAACGAAAATTTGCATA 563475 || | || || ||||| || || || |||||||| |||||| Sbjct 252314 GTGATTGTCTTGCCAGTGAGTGTCTTGACGAAAATCTGCATA 252355 Score = 100 bits (110), Expect = 2e-15 Identities = 158/222 (71%), Gaps = 6/222 (3%) Strand=Plus/Plus Query 563256 GAGACGGAGTACAAGATGAAGGGT--ACTTTCTTTGGTAATATTGTAATCAGCTAGAGTT 563313 ||||||||| || | |||||||| ||| |||| |||||| ||||| | || || Sbjct 253048 GAGACGGAGGACCAAGTGAAGGGTCGACTCCTTTTG--AATATTATAATCGGAAAGCGTA 253105 Query 563314 CTTGAATCTTCAAGTTGTTTTCCGGCAAAAATAAGTCTTTGCTGATCAGGAGGAATTCCT 563373 | | |||||||||||| ||||| ||||| || || | ||||| || |||||||| ||| Sbjct 253106 CGTCCATCTTCAAGTTGCTTTCCAGCAAAGATGAGACGCTGCTGGTCTGGAGGAATACCT 253165 Query 563374 TCTTTATCTTGAATTTTTTGTTTTACTGCCTCAATTGTATCAGTGTGAGTACA-TTCGAG 563432 || || || || ||||| ||||| || || || || || | | || | | || | Sbjct 253166 TCCTTGTCCTGGATTTTCTGTTTAACATTGTCGATAGTGTCGGAG-GACTCTACCTCCAA 253224 Query 563433 AGTAACAGTTTTACCAGTAAGAGTTTTAACGAAAATTTGCAT 563474 ||||| || || || || || || || || ||||| ||||| Sbjct 253225 AGTAATGGTCTTGCCGGTGAGTGTCTTGACAAAAATCTGCAT 253266 Score = 96.9 bits (106), Expect = 3e-14 Identities = 155/220 (70%), Gaps = 2/220 (1%) Strand=Plus/Plus Query 563257 AGACGGAGTACAAGATGAAGGGTACTTTCTTTGGTAATATTGTAATCAGCTAGAGTTCTT 563316 ||||| || || || || ||||| ||| || |||||| || |||| || || | Sbjct 252593 AGACGAAGAACTAGGTGGAGGGTGGATTCCTTCTGAATATTATAGTCAGAGAGCGTGCGG 252652 Query 563317 GAATCTTCAAGTTGTTTTCCGGCAAAAATAAGTCTTTGCTGATCAGGAGGAATTCCTTCT 563376 ||| ||||| ||||||||||| |||||||| | ||||| || |||||||| ||||| Sbjct 252653 CCATCCTCAAGCTGTTTTCCGGCGAAAATAAGACGCTGCTGGTCTGGAGGAATACCTTCC 252712 Query 563377 TTATCTTGAATTTTTTGTTTTACTGCCTCAATTGTATCAGTGTGAGT-ACATTCGAGAGT 563435 || || ||||| || || || || || || || || | || | | ||| | ||| Sbjct 252713 TTGTCCTGAATCTTCTGCTTGACGTTGTCGATGGTGTC-GGAAGACTCAACTTCCAAAGT 252771 Query 563436 AACAGTTTTACCAGTAAGAGTTTTAACGAAAATTTGCATA 563475 | || || ||||| || || || |||||||| |||||| Sbjct 252772 GATTGTCTTGCCAGTGAGTGTCTTGACGAAAATCTGCATA 252811 >seq31 Length=10751 Score = 102 bits (112), Expect = 7e-16 Identities = 177/256 (69%), Gaps = 1/256 (0%) Strand=Plus/Minus Query 550001 ATAGATTTAGGAACCACATATAGTTGTGTTGGTGTTTGGCAAAATGGTAAAGTTGAAATT 550060 |||||| | |||||||| || ||||| || || | | ||||| ||||||||| Sbjct 2554 ATAGATCTTGGAACCACCTACTCCTGTGTCGGCGTCTACAAGAATGGACGCGTTGAAATT 2495 Query 550061 ATTGCCAATGATCAAGGTAACAGAACTACTCCATCTTATGTTTCTTTCACGGAAACTGAA 550120 || ||||||||||||||| | | | ||||| || ||||| | ||||| || || Sbjct 2494 ATCGCCAATGATCAAGGTCATCGTATCACTCCCTCCTATGTCGCATTCACTGAGGACGAG 2435 Query 550121 CATTTAGTTGGTGATGCAGCAAAATATCAAGCCACTGGTAATCCTA-CCAATACTATTTT 550179 | | | || || ||||| || || |||| | ||| || || | |||| || ||||| Sbjct 2434 CGTCTTGTCGGAGATGCCGCCAAGAATCAGTACGCTGCCAACCCCACCCAACACAATTTT 2375 Query 550180 TGATGCTAAACGTTTAATTGGAAGAAGTTTTAATGATTCGACTGTTCAGGCAGATATGAA 550239 |||||| |||||| | ||||| | |||| ||||| | ||| ||| ||||| || Sbjct 2374 TGATGCCAAACGTCTGATTGGTCGCCGTTTCGATGATAAGGATGTCCAGAATGATATTAA 2315 Query 550240 GCATTGGCCTTTCCAA 550255 ||| | || ||| || Sbjct 2314 GCACTTCCCATTCAAA 2299 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 4029288701937620