Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lobosporangium_20transversale_20[genbank_20GCA_5F002105155.1_202017- 04-20] 138 sequences; 42,768,949 total letters Query= NC_019495.1 Length=290304 Score E Sequences producing significant alignments: (Bits) Value seq47 174 3e-38 seq49 154 3e-32 seq57 123 5e-23 >seq47 Length=818200 Score = 174 bits (192), Expect = 3e-38 Identities = 474/720 (66%), Gaps = 7/720 (1%) Strand=Plus/Minus Query 221702 AGGGCAACGCTGGCCAGGTTACACACGGCCACCTCGTCCTTGTTGGTATACTGTATGATC 221761 || |||| ||||||| |||||| || || || ||||| || | || | | ||| Sbjct 305492 AGCGCAATACTGGCCAAGTTACAGACCGCTACTTCGTCTGGACTGCTGTATTCAACAATC 305433 Query 221762 TCTGTACAGAGGTTGCTGCACTTGATGGTCCCCAGGTGATTGTGATTAGACTTGCGATTG 221821 |||||||| | || ||||||||||| || || |||| | ||||| || || || ||| Sbjct 305432 TCTGTACACAAATTACTGCACTTGATCGTTCCAAGGTTCTGTTGATTCGATTTACGGTTG 305373 Query 221822 GCAGCGTCCTTGTAGAGCATAAAGGGACCGCCAGTCTCCAGCTGAGCCACCAGAATCTTG 221881 ||| |||||||| ||||| | || || ||||| ||| ||| ||||||| Sbjct 305372 CAAGCATCCTTGTAAAGCATGTAAGGCGTACCGGTCTCGGTCTGGGCCTCCAGAATAGCA 305313 Query 221882 TCCCAGAGTTCTCT-GGCGCTCACCGTCCTCTTGACTGCACCCTCGGTCTTTTCATACCC 221940 | |||||||| ||| ||| | | ||| | | | |||||| | ||||| | Sbjct 305312 TACCAGAGTT-TCTGGGCCTTGATGGTCTTGCGGGCACGACCCTCACGC---TCATATCG 305257 Query 221941 GGTATAGAGCATGTCAAACTTTTCACCGTACGCCTCGTCCAGGCCTGGACACCTGGCGGG 222000 |||||| || || | ||| || || | || | || || || | || || Sbjct 305256 ATGATAGAGTTCCTCGAATTCTTCGCCCCACACATCTTGAAGTCCAGGTGCCTCCGCAGG 305197 Query 222001 ACACATCAGACTCCAGTGCTTGTTGTCTTTGA-CCCTCTGCATGAAGAGGTCCGGGATCC 222059 ||| | ||||||||||| ||| || | || | ||| |||||| || || ||||||| Sbjct 305196 ACAGAACAGACTCCAGTCAGCGTTTTCCTCGATACGTCT-CATGAACAGATCAGGGATCC 305138 Query 222060 ACAGCGCCTGAAAGAGATCTCTGGTCCGCTGCTCCTCCACGCCGTTGTTTTTCCTCAGAT 222119 | || || | || | ||| | | || ||||||| || |||| || | |||| Sbjct 305137 AGAGAGCATAGAACAAATCACGAGCACGGGTCTCCTCCTTTCCAGTGTTCTTGCGAAGAT 305078 Query 222120 CCAAAAACTCAAAAATGTCAGCGTGCCACGGCTCCAGATAGACGGCCAGAGCGCCGGGTC 222179 ||| || ||||| | || || ||||| || || ||||| | ||| | || || || | Sbjct 305077 CCAGGAATTCAAAGACATCGGCATGCCAGGGTTCGAGATACATGGCAAAGGCACCAGGAC 305018 Query 222180 GCTTGTTGCCACCCTGATCCACCATCCTCTCCAGAGCGTTGAAGATGCGAAGGGTCGGTA 222239 |||||||||| |||||||| || | || | |||| ||| ||||| | || | Sbjct 305017 GCTTGTTGCCGCCCTGATCAACATAACGAGCCGTATTGTTGTAGACACGAAGCATAGGAA 304958 Query 222240 CCAGTCCGTTGGATCGACCGTTGGTGCCCTTAATGTACGCACCGCCGGCCCTCAGGTTAC 222299 || || ||||| ||||| || || |||||| | ||| || | | ||| Sbjct 304957 TCAACCCATTGGAATATCCGTTCGTTCCAGCAATGTATGAACCCGACGCACGAATGTTGT 304898 Query 222300 TGGCAGACATGCCGATACCACCGGCGTGTTTCGAGATCATGGCGCAGCTCTTGAGAGTGT 222359 | | || || || || ||| ||||||||||||||| ||| ||||||| || | Sbjct 304897 GAATATTAAGACCAATGCCTCCAGCGGTTTTCGAGATCATGGCACAGGTCTTGAGGGTAT 304838 Query 222360 CCATGATGCCCTCCATAGAGTCCTCCTTGACGTTCAGCAGAAAACAAGACGACATCTGAG 222419 | ||| ||||| || || || ||||| | ||| || |||||||| |||||||||| Sbjct 304837 CATAGATACCCTCGATCGAATCATCCTTCATCGTCAACAAGAAACAAGATGACATCTGAG 304778 >seq49 Length=746914 Score = 154 bits (170), Expect = 3e-32 Identities = 503/774 (65%), Gaps = 17/774 (2%) Strand=Plus/Minus Query 221702 AGGGCAACGCTGGCCAGGTTACACACGGCCACCTCGTCCTTGTTGGTATACTGTATGATC 221761 || |||| ||||||| |||||| || || ||||| || | || | || | |||||| Sbjct 373906 AGAGCAATACTGGCCAAGTTACAGACAGCGACCTCATCAGGGCTGCTGTATTCGATGATC 373847 Query 221762 TCTGTACAGAGGTTGCTGCACTTGATGGTCCCCAGGTGATTGTGATTAGACTTGCGATTG 221821 ||||||||||| || || |||||||| ||||||| || | ||||| |||||||| || Sbjct 373846 TCTGTACAGAGATTACTACACTTGATAGTCCCCAAGTTCTGTTGATTCGACTTGCGGTTA 373787 Query 221822 GCAGCGTCCTTGTAGAGCATAAAGGGACCGCCAGTCTCCAGCTGAGCCACCAGAATCTTG 221881 || || || || |||||| |||| |||||||| |||||| |||| || | Sbjct 373786 CAGGCATCTTTATAAAGCATATAGGGCGTTCCAGTCTCTGTTTGAGCCTCCAGGATTGCG 373727 Query 221882 TCCCAGAGTTCTCTG-GCGCTCACCGTCCTCTTGACTGCACCCTCGGTCTTT-----TCA 221935 ||| || | |||| || | | ||| | || | ||| ||| || || Sbjct 373726 AACCACAGCT-TCTGAGCCTTGATAGTC----TTAC-GAGCCC---GTCCTTCCAGCTCG 373676 Query 221936 TACCCGGTATAGAGCATGTCAAACTTTTCACCGTACGCCTCGTCCAGGCCTGGACACCT- 221994 || ||||||| | ||||||| ||| || | | || | || || || | ||| Sbjct 373675 TAGGTCATATAGAGTTTCTCAAACTCTTCGCCCCAGACATCTTGTAGACCAGG-CGCCTC 373617 Query 221995 GGCGGGACACATCAGACTCCAGTGCTTGTTGTCTTTGACCCTCTGCATGAAGAGGTCCGG 222054 || ||||| | |||||||| | || | || | | | |||||| ||||| || Sbjct 373616 AGCAGGACAAAAGAGACTCCAATCGCCATTCTGTTCAATTCGTTTCATGAACAGGTCAGG 373557 Query 222055 GATCCACAGCGCCTGAAAGAGATCTCTGGTCCGCTGCTCCTCCACGCCGTTGTTTTTCCT 222114 |||||| || || | || | |||| | || ||| ||| ||| | || || | Sbjct 373556 GATCCAGAGTCCCAGGAACAAGTCTCGAGCACGAGTCTCTTCCTTGCCTGTATTCTTGCG 373497 Query 222115 CAGATCCAAAAACTCAAAAATGTCAGCGTGCCACGGCTCCAGATAGACGGCCAGAGCGCC 222174 || |||||||| ||||| | ||| || ||||| || |||| ||| | ||| | || || Sbjct 373496 AAGGTCCAAAAAATCAAACACGTCCGCATGCCAAGGTTCCAAATACATGGCAAAGGCTCC 373437 Query 222175 GGGTCGCTTGTTGCCACCCTGATCCACCATCCTCTCCAGAGCGTTGAAGATGCGAAGGGT 222234 || |||||||| ||||| ||||| || ||| | | ||| || | | | | Sbjct 373436 TGGCCGCTTGTTTCCACCTTGATCTACATATCTCGCGGTATTGTTAAATACCCTCAACAT 373377 Query 222235 CGGTACCAGTCCGTTGGATCGACCGTTGGTGCCCTTAATGTACGCACCGCCGGCCCTCAG 222294 || | || |||||| || |||| || || || ||| || | ||| ||| | | Sbjct 373376 AGGGATCAATCCGTTAGAATGACCATTCGTACCAGCAATATATGAACCTGAGGCTCGGAT 373317 Query 222295 GTTACTGGCAGACATGCCGATACCACCGGCGTGTTTCGAGATCATGGCGCAGCTCTTGAG 222354 |||| | || | ||| || ||||| || || ||||||||||| || |||||| Sbjct 373316 GTTATGGACATTAAGGCCAATCCCACCAGCAGTCTTGGAGATCATGGCACAAGACTTGAG 373257 Query 222355 AGTGTCCATGATGCCCTCCATAGAGTCCTCCTTGACGTTCAGCAGAAAACAAGACGACAT 222414 || || || || || || ||||| ||||| | ||| || |||||| ||||| Sbjct 373256 GGTATCGTAAATTCCTTCGATCGAGTCATCCTTCATAGTCAAGAGGAAACAACTTGACAT 373197 Query 222415 CTGAGATTTGGTGGAACAGGCGTTAAACAGCGTGGGACTGGCGTGTGTAAAGTA 222468 |||| | | || | || |||||||| | ||| || || ||||| || Sbjct 373196 TTGAGGCCTTGGGGTCCCAGCATTAAACAGGATCGGAGATGCATGCGTAAAATA 373143 >seq57 Length=574579 Score = 123 bits (136), Expect = 5e-23 Identities = 146/198 (74%), Gaps = 0/198 (0%) Strand=Plus/Plus Query 25834 TGGGCCATGAAGTGGATCAACAGCCAGAGCGCTACGTTTGGCGAGCGGCTGGTAGCCTTT 25893 ||||||||||||||||| |||| ||| || |||| || || |||| |||||| Sbjct 520882 TGGGCCATGAAGTGGATTTCTGACCAGGACGCAACCTTTGCTGAACGTTTGGTCGCCTTT 520941 Query 25894 GCTGCTGTGGAGGGCATCTTTTTCAGCGGTTCGTTTGCGGCCATCTTCTGGCTCAAGCAG 25953 |||||||| || |||||||| ||| || | || || ||||||| |||||||| || Sbjct 520942 GCTGCTGTTGAAGGCATCTTCTTCTCTGGCGCATTCGCTTCCATCTTTTGGCTCAAAAAG 521001 Query 25954 AAGGGGACCATGCCCGGGCTGTACTTTTCCAACGAGCTCATCAGCAGGGACGAGGGTCTC 26013 || |||||| || ||| ||| |||||||| |||||| | || ||||||||| Sbjct 521002 CGTGGTCTCATGCCTGGTCTGACCTTCTCCAACGAACTCATCTCGCGTGATGAGGGTCTC 521061 Query 26014 CACAGAGATTTTGCCTGC 26031 |||| ||||| |||||| Sbjct 521062 CACACTGATTTCGCCTGC 521079 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 928843197742720