Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lobosporangium_20transversale_20[genbank_20GCA_5F002105155.1_202017- 04-20] 138 sequences; 42,768,949 total letters Query= NC_020851.1 Length=208007 Score E Sequences producing significant alignments: (Bits) Value seq117 163 4e-35 seq79 149 8e-31 >seq117 Length=942176 Score = 163 bits (180), Expect = 4e-35 Identities = 270/390 (69%), Gaps = 0/390 (0%) Strand=Plus/Plus Query 47757 CTCAACAAACTGACGGACAGAATATTGATTTCCTGTGGCAATAACAAAATCATCAGGTTC 47816 ||||||||||| |||||||| | | ||| || || | ||||| || || | | Sbjct 192458 CTCAACAAACTCACGGACAGTGTGCATCTCTCCCGTTGCCAGGACAAAGTCCTCGGCCTT 192517 Query 47817 TTCTTGTTGAAGCATTAACCACATAGCCTCGACATAATCTCTGGCATGTCCCCAGTCACG 47876 ||| ||||||||||| ||||||| ||||||| ||||| | ||||| ||||||||||| Sbjct 192518 TTCCTGTTGAAGCATCCTCCACATACCCTCGACGTAATCGCGAGCATGGCCCCAGTCACG 192577 Query 47877 AAGTGCATCAAGATTTCCTAGATATAAACAGTCTTGCTTACCTTCAGAGATTGCTTTTAA 47936 || || | || || || || | || ||||| || || ||||| | | Sbjct 192578 CTTCGCGTCCAAGTTACCGAGGTAGAGGCACTCTTGTTTGCCCAACTTGATTGATGCGAC 192637 Query 47937 TGCTCTTGTAATCTTACGAGTTACAAAAGTTTCACCACGTCTTGGAGATTCATGATTAAA 47996 || | || |||||||| || ||||| || ||| || | ||||| || || || || Sbjct 192638 AGCGCAGGTGATCTTACGGGTCACAAAGGTGCGACCGCGGCGAGGAGACTCGTGGTTGAA 192697 Query 47997 AAGAATACCACTACAGGCATACATTCCGTATGATTCACGATAGTTCTTTACTATCCAGTA 48056 ||| ||||| | || |||||||| ||| | ||||| ||||| | |||||||| Sbjct 192698 AAGGATACCGTTGCAAGCATACATGTTGTAGGCCTCACGGTAGTTGACTGTGATCCAGTA 192757 Query 48057 CCCATAGAGTTTTGCAACACCATAAGGAGAACGTGGATAGAAAGGTGTGGTCTCTGTCTG 48116 |||| | || || |||||||||||||| || ||||| || || ||||| || |||| Sbjct 192758 GGCATACATCTTGGCGACACCATAAGGAGAGCGAGGATAAAAGGGAGTGGTTTCGCTCTG 192817 Query 48117 TGGAGTCTCTTGCACCTTACCATAAAGTTC 48146 ||| | || || |||| || || | ||| Sbjct 192818 AGGAATTTCCTGGACCTGTCCGTACAATTC 192847 >seq79 Length=364526 Score = 149 bits (164), Expect = 8e-31 Identities = 274/402 (68%), Gaps = 0/402 (0%) Strand=Plus/Minus Query 47757 CTCAACAAACTGACGGACAGAATATTGATTTCCTGTGGCAATAACAAAATCATCAGGTTC 47816 ||||||||||| ||||||| | | ||||||||| | ||||| || ||||| Sbjct 32775 CTCAACAAACTCGCGGACAGTGTGCATCTCTCCTGTGGCCAGGACAAAGTCCTCAGGACT 32716 Query 47817 TTCTTGTTGAAGCATTAACCACATAGCCTCGACATAATCTCTGGCATGTCCCCAGTCACG 47876 || || || |||||| ||||||| |||| |||||||| | |||||| ||||| ||||| Sbjct 32715 CTCCTGCTGGAGCATTCTCCACATACCCTCAACATAATCGCGGGCATGACCCCAATCACG 32656 Query 47877 AAGTGCATCAAGATTTCCTAGATATAAACAGTCTTGCTTACCTTCAGAGATTGCTTTTAA 47936 ||||| | ||||| || || | || |||||||| || ||||| | Sbjct 32655 CTTGGCATCCAAGTTTCCGAGGTAAAGGCACTCTTGCTTGCCCAACTTGATTGAAGCGAC 32596 Query 47937 TGCTCTTGTAATCTTACGAGTTACAAAAGTTTCACCACGTCTTGGAGATTCATGATTAAA 47996 || | || ||||| || || || || || ||||| | || || || || || || Sbjct 32595 AGCGCAGGTGATCTTGCGGGTGACGAAGGTACGGCCACGGCGGGGTGACTCGTGGTTGAA 32536 Query 47997 AAGAATACCACTACAGGCATACATTCCGTATGATTCACGATAGTTCTTTACTATCCAGTA 48056 || ||||| | || |||||||| ||| | || || ||||| |||||||| Sbjct 32535 GAGGATACCGTTGCAAGCATACATGTTGTAGGCCTCGCGGTAGTTGACAGTGATCCAGTA 32476 Query 48057 CCCATAGAGTTTTGCAACACCATAAGGAGAACGTGGATAGAAAGGTGTGGTCTCTGTCTG 48116 | || | || ||||||||||| || || || ||||||||||| ||||| || |||| Sbjct 32475 GGCGTACAACTTGGCAACACCATAGGGTGAGCGAGGATAGAAAGGAGTGGTTTCGCTCTG 32416 Query 48117 TGGAGTCTCTTGCACCTTACCATAAAGTTCACTGGTGGATGC 48158 ||| |||| || || | ||| || | ||| ||| || || Sbjct 32415 GGGAATCTCCTGAACTTGACCGTACAACTCAGAGGTAGAAGC 32374 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 665493252022160