Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lobosporangium_20transversale_20[genbank_20GCA_5F002105155.1_202017- 04-20] 138 sequences; 42,768,949 total letters Query= NC_021248.1 Length=307691 Score E Sequences producing significant alignments: (Bits) Value seq53 122 2e-22 >seq53 Length=681236 Score = 122 bits (134), Expect = 2e-22 Identities = 170/236 (72%), Gaps = 2/236 (1%) Strand=Plus/Plus Query 192307 ATACCACCTCTAAGACGTAATACTAAATGTAAAGTAGCCTC-TTTAGAGATATTATAATC 192365 ||||| || | ||||| | || || || | || | ||| ||| || ||||||||||| Sbjct 253037 ATACCTCCACGGAGACGGAGGACCAAGTGAAGGGTCGACTCCTTTTGA-ATATTATAATC 253095 Query 192366 AGATAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGG 192425 || | || ||| |||| || | ||| || ||||||||||| | | ||| || || || Sbjct 253096 GGAAAGCGTACGTCCATCTTCAAGTTGCTTTCCAGCAAAGATGAGACGCTGCTGGTCTGG 253155 Query 192426 TGGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTGACGATTC 192485 || || ||||| || || || ||||| | ||| ||||| |||| || || || || Sbjct 253156 AGGAATACCTTCCTTGTCCTGGATTTTCTGTTTAACATTGTCGATAGTGTCGGAGGACTC 253215 Query 192486 TACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAATATCTGCATTTTAT 192541 ||| || | ||||||||| || || || | ||| || | ||| ||||||||||||| Sbjct 253216 TACCTCCAAAGTAATGGTCTTGCCGGTGAGTGTCTTGACAAAAATCTGCATTTTAT 253271 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 984478259316300