Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lobosporangium_20transversale_20[genbank_20GCA_5F002105155.1_202017- 04-20] 138 sequences; 42,768,949 total letters Query= NC_021923.1 Length=140633 Score E Sequences producing significant alignments: (Bits) Value seq47 138 1e-27 seq53 131 2e-25 seq84 127 2e-24 seq49 118 1e-21 >seq47 Length=818200 Score = 138 bits (152), Expect = 1e-27 Identities = 685/1084 (63%), Gaps = 29/1084 (3%) Strand=Plus/Minus Query 138156 ATCTACAGTAAACTTTATGGCATCAGCGGCTGGTTTCGTTCTCAGATAATACATTCCCGT 138215 ||| || |||||||| || || || | || ||| |||| ||||||||||| ||||| Sbjct 306396 ATCCACCGTAAACTTGATCGCGTCCACAGCCGGTCGTGTTCGAAGATAATACATCCCCGT 306337 Query 138216 TTTTAACCCATTTTCCCAGGCGTACATGTGTATCGAAGTGAGTAACGCGTAAGTCGGTTT 138275 || ||||| | ||| | || | ||||| || | | ||| || | Sbjct 306336 CTTCAACCCCCGCTTCCATCCATAAAACGCCATCGACGTCAACTTTCCATAATTCACATC 306277 Query 138276 CGCCAGAAATATGTTAAACGATTGACTCTGATCGATGAAAGCGCCTCGATCAATGGCCAT 138335 ||||| | || || | ||||||| ||||| || || || || || || ||||| Sbjct 306276 CGCCATATGGATATTCATCGATTGAGATTGATCAATAAATGCCCCCCGGTCCGCTGCCAT 306217 Query 138336 GTTAATTA--AATTTTTACTTTTCATCTCCCACACGGTCTTGTATAGATCACGAATATGT 138393 | ||||| | |||| | ||||||||| ||||||||| || | | || Sbjct 306216 ATCAATTACCACCTTTTG--TGAAATCTCCCACGTGGTCTTGTACAGCGCCTTCAAATCA 306159 Query 138394 CGCGGTATTGTTGCAATATTTTGAATGCTCCCGTTGGCCGCAATGATGCGATTTCTCATG 138453 ||| || | | || | ||||| ||||| | |||||||| || || ||| Sbjct 306158 TCCGGAATACTCGGGATCCTCTGAATCGATCCGTTCTCTGCAATGATCCGGTTCTTCAGT 306099 Query 138454 TCATCGTTGTACAGATTCAACTTGATCAAGTCGTTTATCAGATATCTGTTTATGACCTGA 138513 | |||||| |||| || || | |||||| || | || | || | | ||| Sbjct 306098 TGATCGTTCCACAGTCCCATCTCCACCAAGTCCTTCAACATCCACGGATTCACAATCTGG 306039 Query 138514 AATTCACCGGCCAATACTCGACGAACGTAAATGTTGTTGGTGAAAGGCTCAAACGATTCG 138573 || || || || | |||||||| ||| || || ||| | ||||| || |||| Sbjct 306038 AACTCTCCCGCAAGCACTCGACGTGTGTAGATATTAGAGGTATAGGGCTCGAAACATTCA 305979 Query 138574 TTGTTTCCCAGAATCTGAGCCGTGGTCGCGGTCGGCATGTACGCCACCAAAAGAGAATTC 138633 ||| ||||| ||||| | || | || || ||||| |||||||| || || || Sbjct 305978 TTGAAACCCAGGATCTGTGAGGTCGAAGCCGTAGGCATCGGTGCCACCAAGAGTGAGTTG 305919 Query 138634 CGTAAACCGTGAAGCTTGATTCGTTCCTTGAGCGACGACCAGTCCCACAAATCGCTAGGT 138693 || | || || ||||||| | || ||||| ||||||||| | |||| || Sbjct 305918 CGCACTCCATGCTGCTTGATACTGGCCCGGAGCGTATCCCAGTCCCAGAGATCGGAGGGC 305859 Query 138694 TTTTTGTTCCACATATCGTACTGTAACATTCCC----AAACTTGCGGGACTGCCTTCGTA 138749 || |||||| || || || |||||| |||| ||| ||| || || Sbjct 305858 GTTACCCCCCACATGTCCGGTTGCAAGATTCCCTTCGAAAC----GGGTGAGCCCTCATA 305803 Query 138750 CGAATCGTATACACCAAACTCTTGCGCCAACTCGTTGCTCGCCTCGAGCGCACCATAGTA 138809 | || || ||| ||| || |||| ||| | | || | || ||| || Sbjct 305802 GGTCTCATAAGTACCCTCCTCCTGAGCCATCTCACAGGATGATTCCAAAGCCGCATGATA 305743 Query 138810 AATAGTTTCGGCAATCTGCTGATTGAGCAATCGGGCCTCGGCGCTCTCGTACGGCATGCG 138869 || || ||| |||||||| || | | || ||||||| || | |||||||| Sbjct 305742 GATGGTCTCGAAAATCTGCTTGTTCAACTGACGTGCCTCGGGTGAGTCAAAGGGCATGCG 305683 Query 138870 GAGCATCGTGAACGCGTCGGCCAGCCCTTGCACGCCCACTCCGACAGGGCGATGGCGCAG 138929 | | | |||| || || || || || || || ||||| || ||||| ||||| ||| Sbjct 305682 CATCTTGATGAATGCATCCGCTAGACCCTGGACACCCACACCCACAGGACGATGACGCTT 305623 Query 138930 ATTTGACGCTTTTGCGGCTTCGATAGGATAATAGTTTACATCGATGATTTTGTTTAAATT 138989 || ||| | ||| || | |||||| ||||| ||| || || ||||| || || Sbjct 305622 GTTGGACCGCTCTGCCTCTGGAACAGGATAGTAGTTCTGATCAATAATCTTGTTCAAGTT 305563 Query 138990 TCGCACGACCACCTTAGTCGTATGCTTTAATCGT-TCAAAATCGTATGTGCCCCCGTTGT 139048 || || ||||| || || | || | | | || || || || | || | Sbjct 305562 GCGGGTCACGACCTTGGTGACCTGGTG-AAGCATCTTGAAGTCATACGT---CTGATTAT 305507 Query 139049 CGTCGACGACGTCGACAAATTTGTTGACACAAATCGAGGCTATGTTGCACACCGCCACTT 139108 | | | |||| || | ||| | ||| | ||| || ||||| |||| Sbjct 305506 TGATAA--AAGTCGGCAG---------CGCAATACT-GGCCAAGTTACAGACCGCTACTT 305459 Query 139109 CGTCGGGGTCGCTGTATTCGACAATTTCGGCACACAAATTACTACACTTGATCGTACCTA 139168 |||| || ||||||||| ||||| || | |||||||||||| ||||||||||| || | Sbjct 305458 CGTCTGGACTGCTGTATTCAACAATCTCTGTACACAAATTACTGCACTTGATCGTTCCAA 305399 Query 139169 AATTTTGTTGATTGCTTTTTCGGTTACAAGCATCTTTGTAAAGCATATACGGTGTGCCAG 139228 || |||||||| ||| ||||| |||||||| ||||||||||| || || || || | Sbjct 305398 GGTTCTGTTGATTCGATTTACGGTTGCAAGCATCCTTGTAAAGCATGTAAGGCGTACCGG 305339 Query 139229 TTTC 139232 | || Sbjct 305338 TCTC 305335 >seq53 Length=681236 Score = 131 bits (144), Expect = 2e-25 Identities = 165/227 (73%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 |||||||| ||| | || || || ||||| || || ||||| | || ||||| || || Sbjct 253266 ATGCAGATTTTTGTCAAGACACTCACCGGCAAGACCATTACTTTGGAGGTAGAGTCCTCC 253207 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 ||||| | || | || ||||| || ||||| ||||| ||||| || ||||| || || Sbjct 253206 GACACTATCGACAATGTTAAACAGAAAATCCAGGACAAGGAAGGTATTCCTCCAGACCAG 253147 Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883 || ||| | |||||||| || || || || || ||| | | | || |||||||| Sbjct 253146 CAGCGTCTCATCTTTGCTGGAAAGCAACTTGAAGATGGACGTACGCTTTCCGATTATAAT 253087 Query 24884 ATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGG 24930 ||||||||||| ||||| || |||||||| | || | || ||||| Sbjct 253086 ATTCAAAAGGAGTCGACCCTTCACTTGGTCCTCCGTCTCCGTGGAGG 253040 Score = 113 bits (124), Expect = 4e-20 Identities = 161/227 (71%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 |||||||| || | || || |||||||||||||||| || | ||||| || || || Sbjct 252582 ATGCAGATTTTCGTCAAGACTTTAACCGGTAAAACTATCACTTTGGAAGTTGAGTCCTCC 252523 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 ||||| | || | || || || ||||| || ||||| ||||| || || || || || Sbjct 252522 GACACCATCGATAACGTCAAGCAGAAGATTCAGGACAAGGAAGGTATTCCCCCAGACCAG 252463 Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883 || || | ||||| ||||| |||||||| || ||| | | | || || || || Sbjct 252462 CAGCGCCTCATCTTCGCCGGAAAACAGCTTGAAGATGGTCGTACGCTCTCTGACTACAAT 252403 Query 24884 ATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGG 24930 || |||||||| || || || |||||||| | || | ||||| || Sbjct 252402 ATCCAAAAGGAGTCTACCCTTCACTTGGTCCTTCGTCTCCGCGGCGG 252356 Score = 113 bits (124), Expect = 4e-20 Identities = 161/227 (71%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 |||||||| || | || || |||||||||||||||| || | ||||| || || || Sbjct 253038 ATGCAGATTTTCGTCAAGACTTTAACCGGTAAAACTATCACTTTGGAAGTTGAGTCCTCC 252979 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 ||||| | || | || || || ||||| || ||||| ||||| || || || || || Sbjct 252978 GACACCATCGATAACGTCAAGCAGAAGATTCAGGACAAGGAAGGTATTCCCCCAGACCAG 252919 Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883 || || | ||||| ||||| |||||||| || ||| | | | || || || || Sbjct 252918 CAGCGCCTCATCTTCGCCGGAAAACAGCTTGAAGATGGTCGTACGCTCTCTGACTACAAT 252859 Query 24884 ATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGG 24930 || |||||||| || || || |||||||| | || | ||||| || Sbjct 252858 ATCCAAAAGGAGTCTACCCTTCACTTGGTCCTTCGTCTCCGCGGCGG 252812 >seq84 Length=1068272 Score = 127 bits (140), Expect = 2e-24 Identities = 157/215 (73%), Gaps = 0/215 (0%) Strand=Plus/Plus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 ||||||||||| |||| || || ||||| || || || || || || || || || || Sbjct 720672 ATGCAGATCTTCGTTAAGACTCTCACCGGCAAGACCATCACCCTTGAGGTCGAGTCCTCC 720731 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 ||||| | || | || || || |||||||||||||| || || || || || || || Sbjct 720732 GACACCATTGACAACGTCAAGCAGAAGATCCAAGACAAGGAGGGTATTCCCCCAGACCAG 720791 Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883 || ||| | ||||||||||| || ||||| |||||| | | | || || |||||| Sbjct 720792 CAGCGTCTCATCTTTGCCGGTAAGCAGCTTGAGGATGGCCGTACTCTCTCTGACTATAAC 720851 Query 24884 ATTCAAAAGGAATCGACACTACACTTGGTGTTGCG 24918 || || ||||| || || || || ||||| ||||| Sbjct 720852 ATCCAGAAGGAGTCTACCCTTCATTTGGTCTTGCG 720886 Score = 118 bits (130), Expect = 1e-21 Identities = 155/215 (72%), Gaps = 0/215 (0%) Strand=Plus/Plus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 |||||||| || | || || | ||||| || || || || ||||| || || || | Sbjct 720900 ATGCAGATTTTCGTCAAGACCTTGACCGGCAAGACCATCACCCTCGAGGTCGAGTCCTCT 720959 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 || || | || | || || || ||||||||||||||||| || || || || || || Sbjct 720960 GATACCATTGACAATGTCAAGCAGAAGATCCAAGACAAAGAGGGTATTCCCCCAGACCAG 721019 Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883 || ||| | ||||||||||| || ||||| |||||| | | | | || || |||||| Sbjct 721020 CAGCGTCTCATCTTTGCCGGCAAGCAGCTTGAGGATGGCCGTACCCTTTCTGACTATAAC 721079 Query 24884 ATTCAAAAGGAATCGACACTACACTTGGTGTTGCG 24918 || || ||||| || || || || ||||| ||||| Sbjct 721080 ATCCAGAAGGAGTCTACTCTTCATTTGGTCTTGCG 721114 Score = 105 bits (116), Expect = 6e-18 Identities = 160/228 (70%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 |||||||| || | || || | ||||| || || || || || || || ||| || | Sbjct 721356 ATGCAGATTTTCGTCAAGACCTTGACCGGCAAGACCATCACCCTTGAGGTCGAATCCTCT 721415 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 || || | || | || || || ||||||||||| || || || || || || || || Sbjct 721416 GATACCATTGACAATGTCAAGCAGAAGATCCAAGATAAGGAGGGTATTCCCCCAGACCAG 721475 Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883 || || | || ||||| || || ||||| |||||| | | | | || || |||||| Sbjct 721476 CAGCGCCTCATTTTTGCTGGCAAGCAGCTTGAGGATGGCCGTACCCTTTCTGACTATAAC 721535 Query 24884 ATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGGC 24931 ||||| ||||| || || || || ||||| ||||| | ||||| ||| Sbjct 721536 ATTCAGAAGGAGTCCACCCTTCATTTGGTATTGCGCCTTCGCGGTGGC 721583 >seq49 Length=746914 Score = 118 bits (130), Expect = 1e-21 Identities = 601/943 (64%), Gaps = 39/943 (4%) Strand=Plus/Minus Query 139086 GGCTATGTTGCACACCGCCACTTCGTCGGGGTCGCTGTATTCGACAATTTCGGCACACAA 139145 ||| | ||| || || || || || || ||| ||||||||||| || || | ||| | Sbjct 373895 GGCCAAGTTACAGACAGCGACCTCATCAGGGCTGCTGTATTCGATGATCTCTGTACAGAG 373836 Query 139146 ATTACTACACTTGATCGTACCTAAATTTTGTTGATTGCTTTTTCGGTTACAAGCATCTTT 139205 ||||||||||||||| || || || || |||||||| || |||||||| |||||||| Sbjct 373835 ATTACTACACTTGATAGTCCCCAAGTTCTGTTGATTCGACTTGCGGTTACAGGCATCTTT 373776 Query 139206 GTAAAGCATATACGGTGTGCCAGTTTCCACTTGTGTCTCTATAAT---GAATTTGAACAA 139262 ||||||||||| || || ||||| || ||| | ||| | || ||| ||| Sbjct 373775 ATAAAGCATATAGGGCGTTCCAGTCTCTGTTTGAGCCTCCAGGATTGCGAA---CCACAG 373719 Query 139263 GTCCCTAG-CTTG-TA-TTTGACGCACGTAAAGTTCGTCGCGCTCGTACTTTTCGTAGAG 139319 | | || |||| || | | ||| | || | || ||||||| | ||||| Sbjct 373718 CTTCTGAGCCTTGATAGTCTTACGAGC---CCGTCCTTCCAGCTCGTAGGTCATATAGAG 373662 Query 139320 TTCGTCGAATCGTTCACCGTAGGCGTCAGAAAGATCGCGACACTTGTCAGGACACATGAG 139379 || || || ||| || || | || ||| | | || ||||||| | ||| Sbjct 373661 TTTCTCAAACTCTTCGCCCCAGACATCTTGTAGACCAGGCGCCTCAGCAGGACAAAAGAG 373602 Query 139380 CGACCATACGCCGTTCGCCTTGACGCGCCTCATGAACAGATCCGGAATCCACAAAGCGAA 139439 ||| |||| ||| | | || |||||||||| || || ||||| | | | Sbjct 373601 ACTCCAATCGCCATTCTGTTCAATTCGTTTCATGAACAGGTCAGGGATCCAGAGTCCCAG 373542 Query 139440 CAGCAAATCGCGCGCCTTCTTATCTTCCGAACCCATGTTACGTTTCATGTTAAGG----- 139494 | ||| || || || | |||||| || ||| ||| || |||| Sbjct 373541 GAACAAGTCTCGAGCACGAGTCTCTTCCTTGCC--TGT----ATTCTTGCGAAGGTCCAA 373488 Query 139495 -AAATCAAAAACGTCAGCGTGCCATGGTTCCAGATAGATGGCCATTGCGCCTTTCCGTTT 139553 |||||||| ||||| || ||||| ||||||| ||| ||||| | || ||| ||| || Sbjct 373487 AAAATCAAACACGTCCGCATGCCAAGGTTCCAAATACATGGCAAAGGCTCCTGGCCGCTT 373428 Query 139554 G---CCACCTTGATCGACGTGTCGTACAGCATTATTGAATACGCGCAACATCGGCTCCAG 139610 | ||||||||||| || | || | | ||| || ||||| | |||||| || || Sbjct 373427 GTTTCCACCTTGATCTACATATCTCGCGGTATTGTTAAATACCCTCAACATAGGGATCAA 373368 Query 139611 ACCGCTCGCTGTTCCGTTGGTGCTACGGAT---GGGACTGTTGCGAGCTCGGACGTCATG 139667 ||| | | || || || | | || | || || | ||||||| || ||| Sbjct 373367 TCCGTTAGAATGACCATTCGTACCAGCAATATATGAAC--CTGAG-GCTCGGATGTTATG 373311 Query 139668 TACATTGATGCCGATTCCGCCGCCAAATTTGGATATTAAAACGCAATCGCGTAATGTCTC 139727 ||||| | ||| || || || || ||||| || | | ||| | || || Sbjct 373310 GACATTAAGGCCAATCCCACCAGCAGTCTTGGAGATCATGGCACAAGACTTGAGGGTATC 373251 Query 139728 GTATATACCTCTTATGCTGTCGTCCTGCATCGTGACCAGAAAGCATGACGAAAGTTGCGG 139787 ||| || ||| || ||| |||| ||| || | || || || || | ||| || Sbjct 373250 GTAAATTCCTTCGATCGAGTCATCCTTCATAGTCAAGAGGAAACAACTTGACATTTGAGG 373191 Query 139788 TAGTTTCGTGCCGGCTGCAAACAGAGTAGGACTCGCGTGCGTGAACATTTGTTTC-GACA 139846 | || || || |||||| | ||| || ||||| || || | |||| |||| Sbjct 373190 CCTTGGGGTCCCAGCATTAAACAGGATCGGAGATGCATGCGT-AAAATATTTTTCAGACA 373132 Query 139847 TCAATTCGTACGTTTCGATGGCGCTCACAATATCCCTTCCGTGGATACCGACAGAGACTC 139906 | | | || ||||| ||||| | | |||||| || ||||| || |||| || | Sbjct 373131 TGTAGTTATAAGTTTCAATGGCCTTGTCGATATCCTCACCATGGATCCCAACAGCAACAC 373072 Query 139907 GCATCAGCATATGTTGGATCCGTTCGGCCACCGCGCCCTCGAtttttttCAG--ATAACC 139964 |||| ||||| ||||| || || | | | ||| ||||| || || || | | Sbjct 373071 GCATGAGCATTTGTTGAGGCCTCTCTACTATCTTGCCATCGATCTTGAGGAGGTATGATC 373012 Query 139965 GTTCTCTAGGGTCTTGTAGCCAAAGTACCTATAGTTGAAATCG 140007 || || |||||||| |||| ||||| || ||||||||||| Sbjct 373011 GT--TCCAGGGTCTTAAAGCCGAAGTAGTTAAAGTTGAAATCG 372971 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 449896823926640