Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lobosporangium_20transversale_20[genbank_20GCA_5F002105155.1_202017- 04-20] 138 sequences; 42,768,949 total letters Query= NC_026440.1 Length=2243109 Score E Sequences producing significant alignments: (Bits) Value seq128 141 1e-27 seq47 123 4e-22 seq106 113 6e-19 seq57 93.3 6e-13 seq95 91.5 2e-12 seq1 91.5 2e-12 >seq128 Length=917205 Score = 141 bits (156), Expect = 1e-27 Identities = 182/247 (74%), Gaps = 12/247 (5%) Strand=Plus/Plus Query 724899 TACTCGTCCTTTATCTACAAGGTGCTCAAGCAGGTGCACCCCCGAACCGTTGGGCCATCC 724958 ||||| || | ||||||||||| | |||||||| |||||| |||| | ||| Sbjct 807382 TACTCTTCTTACATCTACAAGGTCTTGAAGCAGGTCCACCCCGATACCGGT-----ATC- 807435 Query 724959 TCCAACAAGTCCATGTCGATCATGAACTCGTTTGTCAACGACATGATCGACCGCATCGGC 725018 ||||||||| | ||||| || | |||||||| |||||||| || | || ||||| | | Sbjct 807436 TCCAACAAGGCTATGTCCATTCTCAACTCGTTCGTCAACGATATCTTTGAGCGCATTGCC 807495 Query 725019 ACCGAGGCCGGTC---GCCTGGCGCGCTCCAACAAGCGCAACACGATCGGCACGCGCGAG 725075 ||||| || || || || || |||||||||| ||| ||| |||||||| Sbjct 807496 GGTGAGGCT--TCCAAGCTTGCTGC-CTACAACAAGCGCTCCACTATCTCTTCGCGCGAG 807552 Query 725076 ATCCAGACCGCCGTGCGCCTGATCATGCGCGGCGAACTGGCCAGGCACGCCGTCTCCGAG 725135 || |||||||| || ||||| ||| | | ||| ||||| |||| |||||||||||| ||| Sbjct 807553 ATTCAGACCGCTGTTCGCCTCATCCTTCCCGGTGAACTTGCCAAGCACGCCGTCTCTGAG 807612 Query 725136 GGCACCA 725142 || |||| Sbjct 807613 GGTACCA 807619 >seq47 Length=818200 Score = 123 bits (136), Expect = 4e-22 Identities = 193/276 (70%), Gaps = 0/276 (0%) Strand=Plus/Plus Query 259910 TTCACCTCAGCGACGCCCACGCTCTTTAATGCCGGCACGCCGCGCCCGCAGAATTCGTCG 259969 |||||| || ||||||||||||| ||||| || || || ||||| |||| || || Sbjct 304732 TTCACCCATGCTTCGCCCACGCTCTTCAATGCTGGAACACCTCGCCCTCAGATGTCATCT 304791 Query 259970 TGCTTTCTGTTGGACATGAAGGCCGATTCGATCGAGGGCATCTATGACACGCTCAAGCAG 260029 || || ||||| ||||||| |||||||||||||| |||||||| || |||||| Sbjct 304792 TGTTTCTTGTTGACGATGAAGGATGATTCGATCGAGGGTATCTATGATACCCTCAAGACC 304851 Query 260030 TGCGCGCTCATCTCCAAGGCGGCCGGCGGCATCGGTTTTGCCGCACACAAGGTGCGCGCC 260089 || || | ||||| || | || || ||||| ||| || ||||| | || || Sbjct 304852 TGTGCCATGATCTCGAAAACCGCTGGAGGCATTGGTCTTAATATTCACAACATTCGTGCG 304911 Query 260090 GCGGGCGCCTACGTGGCGGGCACCAACGGCCAGTCCAACGGCCTTGTGCCCATGCTTCGC 260149 |||| | ||| | || || || ||||| | ||||| || | | || |||||||| Sbjct 304912 TCGGGTTCATACATTGCTGGAACGAACGGATATTCCAATGGGTTGATTCCTATGCTTCGT 304971 Query 260150 GTTTTTAACGACACGGCGCGCTACGTCGACCAGTGC 260185 || | ||| | ||||| || || || || ||| || Sbjct 304972 GTCTACAACAATACGGCTCGTTATGTTGATCAGGGC 305007 >seq106 Length=977852 Score = 113 bits (124), Expect = 6e-19 Identities = 175/248 (71%), Gaps = 14/248 (6%) Strand=Plus/Plus Query 724899 TACTCGTCCTTTATCTACAAGGTGCTCAAGCAGGTGCACCCCCGAACCGTTGGGCCATCC 724958 ||||| |||| ||||| ||||| | |||||||| |||||| || | | ||| Sbjct 701272 TACTCCTCCTACATCTATAAGGTCTTGAAGCAGGTCCACCCCGACACTGGT-----ATC- 701325 Query 724959 TCCAACAAGTCCATGTCGATCATGAACTCGTTTGTCAACGACATGATCGACCGCATCGGC 725018 ||||||||| ||||||| || | |||||||| ||||| || || | || ||||||| | Sbjct 701326 TCCAACAAGGCCATGTCCATTCTCAACTCGTTCGTCAATGATATCTTTGAGCGCATCGCC 701385 Query 725019 ACCGAGGCCGGTCGCCTGGCGCGCTCC----AACAAGCGCAACACGATCGGCACGCGCGA 725074 ||||| || || |||| | |||||||| || ||| | ||||| Sbjct 701386 GGTGAGGCTT----CCAAGCTCGCTGCTTATAACAAGCGTTCTACTATCTCTTCTCGCGA 701441 Query 725075 GATCCAGACCGCCGTGCGCCTGATCATGCGCGGCGAACTGGCCAGGCACGCCGTCTCCGA 725134 |||||||||||| || || || ||| | | || ||||| |||| |||||| ||||| || Sbjct 701442 GATCCAGACCGCTGTCCGTCTTATCCTTCCTGGTGAACTCGCCAAGCACGCTGTCTCTGA 701501 Query 725135 GGGCACCA 725142 ||| |||| Sbjct 701502 GGGTACCA 701509 >seq57 Length=574579 Score = 93.3 bits (102), Expect = 6e-13 Identities = 117/157 (75%), Gaps = 9/157 (6%) Strand=Plus/Plus Query 1456123 AAAAAGGCCGACTGGGCGATGAAGTGGATCA---ACAAGGAGGGCCTCGACACTTTGCCG 1456179 || ||||| | |||||| ||||||||||| || |||| | | || |||||| | Sbjct 520870 AAGAAGGCTGCCTGGGCCATGAAGTGGATTTCTGACCAGGACG----CAAC-CTTTGCTG 520924 Query 1456180 AGCGGCTCGTCGGCTTTGCCGC-GTCGAGGGCATCTTTTTCTCGGGCAGTTTCTGCGCCA 1456238 | || | |||| |||||| || || || |||||||| ||||| ||| ||| ||| Sbjct 520925 AACGTTTGGTCGCCTTTGCTGCTGTTGAAGGCATCTTCTTCTCTGGCGCATTCGCTTCCA 520984 Query 1456239 TCTTTTGGCTCAAGAAGCGCGGCCTCATGCCCGGTCT 1456275 ||||||||||||| ||||| || |||||||| ||||| Sbjct 520985 TCTTTTGGCTCAAAAAGCGTGGTCTCATGCCTGGTCT 521021 >seq95 Length=994324 Score = 91.5 bits (100), Expect = 2e-12 Identities = 171/247 (69%), Gaps = 12/247 (5%) Strand=Plus/Plus Query 724899 TACTCGTCCTTTATCTACAAGGTGCTCAAGCAGGTGCACCCCCGAACCGTTGGGCCATCC 724958 ||||| |||| ||| |||||||| | |||||||| || ||| |||| | || Sbjct 596393 TACTCCTCCTATATTTACAAGGTCTTGAAGCAGGTTCATCCCGATACCGGT-----ATT- 596446 Query 724959 TCCAACAAGTCCATGTCGATCATGAACTCGTTTGTCAACGACATGATCGACCGCATCGGC 725018 || |||||| ||||||| || ||||||||||||| || || || | || || || | Sbjct 596447 TCGAACAAGGCCATGTCCATTTTGAACTCGTTTGTGAATGATATCTTTGAGCGTATTGCT 596506 Query 725019 ACCGAGGCCGGTC---GCCTGGCGCGCTCCAACAAGCGCAACACGATCGGCACGCGCGAG 725075 |||||| || || || || | ||| |||||| || ||| | | |||||| Sbjct 596507 GGAGAGGCC--TCCAAGCTTGCTGC-TTACAATAAGCGCTCAACTATCTCCTCCCGCGAG 596563 Query 725076 ATCCAGACCGCCGTGCGCCTGATCATGCGCGGCGAACTGGCCAGGCACGCCGTCTCCGAG 725135 || ||||| || || || ||||| | | ||| ||||| || | ||| || || || ||| Sbjct 596564 ATTCAGACTGCTGTCCGTTTGATCCTCCCCGGTGAACTTGCAAAGCATGCTGTTTCTGAG 596623 Query 725136 GGCACCA 725142 || |||| Sbjct 596624 GGTACCA 596630 >seq1 Length=1854208 Score = 91.5 bits (100), Expect = 2e-12 Identities = 172/253 (68%), Gaps = 0/253 (0%) Strand=Plus/Plus Query 259919 GCGACGCCCACGCTCTTTAATGCCGGCACGCCGCGCCCGCAGAATTCGTCGTGCTTTCTG 259978 ||||| || ||| | |||||||| || || || || || |||| || ||||| | Sbjct 981807 GCGACTCCTACGTTGTTTAATGCTGGAACACCTCGTCCTCAGATGTCAAGCTGCTTCTTA 981866 Query 259979 TTGGACATGAAGGCCGATTCGATCGAGGGCATCTATGACACGCTCAAGCAGTGCGCGCTC 260038 | | ||| | |||| || ||||||||||| ||||| | ||| ||| | || Sbjct 981867 GTTCAAATGGCAGACGATAGTATTGAGGGCATCTACGACACCTTGAAGACATGCTCTCTG 981926 Query 260039 ATCTCCAAGGCGGCCGGCGGCATCGGTTTTGCCGCACACAAGGTGCGCGCCGCGGGCGCC 260098 || ||||| || || |||||| | ||| || || || | || || |||| | Sbjct 981927 ATTTCCAAAGCTGCAGGCGGCGTTGGTATTAGTTTCCAAAAAATTCGTGCATCGGGATCA 981986 Query 260099 TACGTGGCGGGCACCAACGGCCAGTCCAACGGCCTTGTGCCCATGCTTCGCGTTTTTAAC 260158 ||| | || || ||||| ||| | || || ||| | || |||||||||||||| || ||| Sbjct 981987 TACATTGCTGGAACCAATGGCAACTCGAATGGCATCGTCCCCATGCTTCGCGTCTTCAAC 982046 Query 260159 GACACGGCGCGCT 260171 || || || |||| Sbjct 982047 GATACCGCTCGCT 982059 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 7177797889646356