Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lobosporangium_20transversale_20[genbank_20GCA_5F002105155.1_202017- 04-20] 138 sequences; 42,768,949 total letters Query= NC_028093.1 Length=182309 Score E Sequences producing significant alignments: (Bits) Value seq49 241 2e-58 seq57 145 9e-30 >seq49 Length=746914 Score = 241 bits (266), Expect = 2e-58 Identities = 1127/1760 (64%), Gaps = 82/1760 (5%) Strand=Plus/Plus Query 104231 ATGTTCATGCGCGTGGCCATCGGTATTCATGGGGAAGACATTGATTCTGTCTTGGAGACA 104290 ||| ||||||| || || | || || ||||| || || || || | | | || || Sbjct 373062 ATGCTCATGCGTGTTGCTGTTGGGATCCATGGTGAGGATATCGACAAGGCCATTGAAACT 373121 Query 104291 TACGACAAGATGTCCCAAGG-TATGTTCATTCACGCAACACCAACCCTCTTCAATGCTGG 104349 || || | ||||| || ||| || | || ||| | || | ||| || |||||||| Sbjct 373122 TATAACTACATGTCTGAAAAATATTTT-ACGCATGCATCTCCGATCCTGTTTAATGCTGG 373180 Query 104350 TACACCAAGACCCCAAATGTCCAGTTGCTTCCTTATCGCCAACAAGGAGGACTCAATCAA 104409 || ||||| || |||||||| ||||| ||||| | | | ||||| ||||| ||| | Sbjct 373181 GACCCCAAGGCCTCAAATGTCAAGTTGTTTCCTCTTGACTATGAAGGATGACTCGATCGA 373240 Query 104410 CGGTATCTATGGAACTCTTACGGAGTGTGCGCAAATCTCAAAGTGGGCTGGGGGTATTGG 104469 || || || | || || | | ||||| ||||| ||| ||||| || ||||| Sbjct 373241 AGGAATTTACGATACCCTCAAGTCTTGTGCCATGATCTCCAAGACTGCTGGTGGGATTGG 373300 Query 104470 GATGCACATCCATGATGTGAGAGCCAATAAATCTCGTATTCGGGGGACAAATGGTCAATC 104529 | | ||||| | | ||||| || |||| || || |||||||| || Sbjct 373301 CCTTAATGTCCATAACATCCGAGCCTCAGGTTCATATATTGCTGGTACGAATGGTCATTC 373360 Query 104530 AGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGCGCGCTATGTAAATCAAGC 104589 | || | || || ||| | | ||||||||| || ||| | |||||| |||||| Sbjct 373361 TAACGGATTGATCCCTATGTTGAGGGTATTTAACAATACCGCGAGATATGTAGATCAAGG 373420 Query 104590 TGG------GCGTCGAAAGGGATCTATCGCAGTCTATCTTGAGCCATGGCACGCGGATAT 104643 ||| ||| | | ||| | | || | ||| | || || ||||| ||||| | Sbjct 373421 TGGAAACAAGCGGCCA---GGAGCCTTTGCCATGTATTTGGAACCTTGGCATGCGGACGT 373477 Query 104644 CATGGAGTTCCTTGAGTTGCGTCTCAACCAAGGTGACGAGGAGGCGCGGTGC-CGCGATC 104702 | || || | || | || || ||| | || ||| | || ||| || || Sbjct 373478 GTTTGATTTTTTGGACCTTCGCAAGAATACAGGCAAGGAAGAGACTCG-TGCTCGAGACT 373536 Query 104703 TCTTCTCCGCTCTCTGGATTCCAGATCTCTTCATGAAGAGAGTTGAGGAGAGTGGCAATT 104762 | ||| | |||||||| || || || |||||||| || |||| ||| |||| ||| Sbjct 373537 TGTTCCTGGGACTCTGGATCCCTGACCTGTTCATGAAACGAATTGAACAGAATGGCGATT 373596 Query 104763 GGTCTCTCTTTTGTCCAGACAAGGCACCTGGTCTCTCCGATGCCGTGGGTGAGGAGTTTG 104822 || |||||||||||| | |||| |||||||| |||| | ||| || ||||||| Sbjct 373597 GGAGTCTCTTTTGTCCTGCTGAGGCGCCTGGTCTACAAGATGTCTGGGGCGAAGAGTTTG 373656 Query 104823 AAGCCCTTTACACAAAGTACGAGGAAGAAGGTCGGGCGACTGCGACGGTGCCAGCTGCCG 104882 | || || | | |||||| ||||| ||||| | ||| | ||| | | Sbjct 373657 AGAAACTCTATATGACCTACGAGCTGGAAGGACGGGCTCGTAAGACTATCAAGGCT-CAG 373715 Query 104883 ATG-TGTGGAAAGCTATTCTCAAGTCTCAAACCGAGACTGGTACACCATACATGCTTTAC 104941 | | ||||| || || || || ||||||| |||||||| || || || |||||||| Sbjct 373716 AAGCTGTGGTTCGCAATCCTGGAGGCTCAAACAGAGACTGGAACGCCCTATATGCTTTAT 373775 Query 104942 AAAGACGCCTGTAACCAAAAGAGTAATCAAAAGAATTTGGGTGTGATCAAGAGTTCCAAT 105001 ||||| |||||||||| ||| |||||| |||| ||||| |||||| || ||| Sbjct 373776 AAAGATGCCTGTAACCGCAAGTCGAATCAACAGAACTTGGGGACTATCAAGTGTAGTAAT 373835 Query 105002 CTCTGTACAGAAATCTTGGAATTTA-CAGACAAAGATGAGACGGCTGTGTGTAACCTCGC 105060 ||||||||||| ||| | |||| | ||| | |||||| ||||| |||||| | || Sbjct 373836 CTCTGTACAGAGATCATCGAATACAGCAG-CCCTGATGAGGTCGCTGTCTGTAACTTGGC 373894 Query 105061 ATCAATCGCTCTCCCCAAGTATGT--GGATCCAGAGACAAAGAC--------ATTTGATT 105110 || ||||| || | | ||| || | | ||||| | | |||||||| Sbjct 373895 CAGTATTGCTCTTCCTACCTTTGTCATGA-CTGGTGACAATGGCATTCCAGTATTTGATT 373953 Query 105111 ATGAAAAACTCCACGAAGTTACGAAAACTGTCACCAAAAACCTAAACAGAGTTATTGATA 105170 | | |||||| | | || ||| || || ||||| || | |||||||||| Sbjct 373954 TCAAGATGCTCCACAAGATCACTAAAGTCGTAACTCGGAACCTGAATAAGGTTATTGATA 374013 Query 105171 GAAATTTTTACCCCGT---TGAGACTGCTCGTAAA-TCTAATATGAGACACCGTCCAATT 105226 |||| | |||||| || |||| | || ||| || || | | || ||||||||| Sbjct 374014 GAAACTATTACCCAGTTCCTGAGGC----CGAAAAGTCCAACAAACGTCATCGTCCAATT 374069 Query 105227 GGTCTCGGTGTTCAGGGTCTCGCGGATGTATTCATTCTTTGTCGCCACG-CATTTGATTC 105285 || | || || ||||| || || || | || ||| | || | | ||||| || Sbjct 374070 GGATTGGGAGTCCAGGGCCTAGCAGACGCCTT-TTTCAAAATGCACATGCCCTTTGACTC 374128 Query 105286 CGACGAAGCGAAGGAAATCAATGCGCGCATATTTGAGACCATGTATCACGCCGCTCTTGA 105345 ||||| || | || | || ||||||||||| ||||| || || || || Sbjct 374129 GCTTGAAGCCCGCAAATTGAACGTCTTGATTTTTGAGACCATCTATCATGCTGCACTCGA 374188 Query 105346 GGCGAGTTCAGAGTTGGCAGAGGTTGATGGTCCATATGAAACCTTTGAGGGTTCTCCAGC 105405 || || ||| | || | | || ||| || | |||| | || ||||||| Sbjct 374189 AGCATCTTGTGAGCTTGCTCAAGAAGAGGGTGTCTACGTGACCTATCCAGGGTCTCCAGT 374248 Query 105406 TTCACAAGGGGTGCTTCAATTTGATATGTGGGAAGGTGAGACCAAGCT--TCACTACGAC 105463 || | || | || ||| || ||||||| ||| | |||| || || || ||| Sbjct 374249 GTCTAAGGGTATTCTGCAACCAGACATGTGGG-GGGTCACTCCAA-CTGATCTCTGGGAC 374306 Query 105464 TGGGAAGCTCTCAAGGAACGCATCAAGGAGAAGGGTCTTCGTAACAGTCTCCTCATGGCT 105523 ||||| | || || ||| | || | || | || ||| | || | ||| Sbjct 374307 TGGGACACCCTTCGTGACAACATTTCGAAGCATGGCGTCCGGAACTCGTTGCTTGTAGCT 374366 Query 105524 CCAATGCCAACAGCCTCCACCGCACAAATCTTGGGTAATAATGAATGCTTTGAACCCTAC 105583 || ||||| ||||| ||||| | || ||||||||||| |||||||| ||||| || || Sbjct 374367 CCCATGCCCACAGCGTCCACATCCCAGATCTTGGGTAACAATGAATGTTTTGAGCCTTAT 374426 Query 105584 ACGACGAACATCTATCTGAGAAGAACCCTCGCGGGAGAGTTTGTGATTGTCAACAAGCAT 105643 || | ||||||| | ||| | |||||||| || || |||||| || Sbjct 374427 ACTTCCAACATCTTTACAAGACGCGTTCTCGCGGGTGAATTCCAGATTGTGAA------- 374479 Query 105644 CTCGTGGATGACCTCAAAGAGAT---------TGGTCTCTGGTCCAAGGATATGAAGGAT 105694 | | |||||| |||||||| || |||||| ||| || | | | ||| | Sbjct 374480 CCCTTGGATG--CTCAAAGATATGGTCGATCGTGGTCTATGGACCGATTCTCTAAAGAAC 374537 Query 105695 C---TCATGGTGAAAGCGGGTGGTTCCATTCAAAATAT-TGTGGATATTCCAAATGAAAT 105750 | |||| | | | | ||| || || |||||||| | ||| ||||| ||| || Sbjct 374538 CGGATCATTGCG---GAGAATGGCTCTATCCAAAATATCTCTGG-GGTTCCAGATG--AT 374591 Query 105751 TAAGAAG--TTGTACCGCACAGTTTGGGAAATCAAGATGAAGGATGTCATTGACATGGCC 105808 | | ||| |||||| || ||||||||| |||| ||||||||||||| Sbjct 374592 TTAAAAGCCTTGTACAAGACCACGTGGGAAATCTCTCAAAAGGTCATCATTGACATGGCA 374651 Query 105809 GCAGATCGTGGTCGCTTCATTGATCAAAGTCAAAGTATGAATCTCTTCATGGAAAGTCCA 105868 || |||||||| || || |||||| |||| | || ||||| | ||| Sbjct 374652 GCGGATCGTGGGGCCTATATCGATCAATCTCAATCGCTAAA--CATTCAT---ATGTCGG 374706 Query 105869 ACG---ATGTC--CAAGCTCTCTTCTATGCACATGTACAGTTGGAAGAAGGGTCTCAAAA 105923 ||| | || ||||| | |||| | || | |||||||||||||| || | Sbjct 374707 ACGTAAACTTCGGAAAGCTGACAAGTATGGCGTTTTATGGATGGAAGAAGGGTCTAAAGA 374766 Query 105924 CGGGGATGTATTACCTCCGA 105943 | |||||||||||||| ||| Sbjct 374767 CCGGGATGTATTACCTACGA 374786 >seq57 Length=574579 Score = 145 bits (160), Expect = 9e-30 Identities = 161/212 (76%), Gaps = 2/212 (1%) Strand=Plus/Plus Query 94734 AGTTCCGTGTATTCAAAAGAAAGCGGATTGGGCTATGAAGTGGTTTGAT-ACAAAGTCGC 94792 |||||| || |||| ||||| || | ||||| ||||||||| || | || | | ||| Sbjct 520854 AGTTCCTTGCATTCGCAAGAAGGCTGCCTGGGCCATGAAGTGGATTTCTGACCAGGACGC 520913 Query 94793 GTTCCTTTGCTGAGCGACTCTTCGCATTTGCGTGTGTTGAGGGTATCTTCTTCTCTGGTT 94852 |||||||||| || | |||| ||||| |||||| || |||||||||||||| Sbjct 520914 AA-CCTTTGCTGAACGTTTGGTCGCCTTTGCTGCTGTTGAAGGCATCTTCTTCTCTGGCG 520972 Query 94853 CCTTCTGCGCTATTTATTGGCTCAAGAAGCGAGGTCTCATGCCAGGTCTCTGCTTCTCCA 94912 | ||| | || | ||||||||| ||||| ||||||||||| ||||| |||||||| Sbjct 520973 CATTCGCTTCCATCTTTTGGCTCAAAAAGCGTGGTCTCATGCCTGGTCTGACCTTCTCCA 521032 Query 94913 ACGAGCTTATCTCTCGTGACGAGGGACTCCAC 94944 |||| || ||||| ||||| ||||| |||||| Sbjct 521033 ACGAACTCATCTCGCGTGATGAGGGTCTCCAC 521064 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 583259793875120