Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lobosporangium_20transversale_20[genbank_20GCA_5F002105155.1_202017- 04-20] 138 sequences; 42,768,949 total letters Query= NC_030656.1 Length=133492 Score E Sequences producing significant alignments: (Bits) Value seq57 87.8 2e-12 >seq57 Length=574579 Score = 87.8 bits (96), Expect = 2e-12 Identities = 192/287 (67%), Gaps = 3/287 (1%) Strand=Plus/Minus Query 4809 GGGTCTTGAATATAAGTGTCTATTAGTAGGCTATACATTTCAGAATGTATATTTTCTATA 4868 || |||| | ||| ||||| || || || ||||| || ||||| | ||| || || Sbjct 520478 GGTTCTTTGACATAGGTGTCAATGAGAAGAGAGTACATCTCTGAATGAACATTCTCAATC 520419 Query 4869 GCAATCTGAAATCCGTAAAAGCATCTAGCTTCTGTTACTTGAACTTCGTTACAAAATCTT 4928 || || || || ||||||||||| ||||| | | || || || || | || | | Sbjct 520418 ATGATTTGGAAGCCATAAAAGCATCTTGCTTCAGGGATCTGGACCTCATTCGAGAAACGT 520359 Query 4929 TCTACTAAGTTTTCGTTTACTATACCGTCACTGGCTGCAAAAAACGCCAAAACATGAGAT 4988 || | | ||| || || || ||||| || || || ||||| || |||| | || || Sbjct 520358 TCCAAGAGGTTCTCATTCACAATACCATCGCTAGCAGCAAAGAAGGCCAGGATGTGTGAA 520299 Query 4989 ATAAAGTACTGT---TCGTCAGGCTTAAGTTTTTTCCAGTGGGGCAAATCTTTAGTTAAA 5045 | ||| | || || || | | | | |||| ||||| ||| || || | | | Sbjct 520298 ACGAAGAATCGTTCATCTTCTGTCAAACGGTTTTCCCAGTCATGCATGTCCTTGGAAAGA 520239 Query 5046 TCAACTTCTTCAACAGTCCAAAACGACGCTTCCGCTTTTTTGTACAT 5092 || ||||| ||| ||||||| || || ||||| || || |||||||| Sbjct 520238 TCTACTTCCTCAGCAGTCCAGAAGGATGCTTCAGCCTTCTTGTACAT 520192 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 427048881755954