Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lobosporangium_20transversale_20[genbank_20GCA_5F002105155.1_202017- 04-20] 138 sequences; 42,768,949 total letters Query= NC_032111.1 Length=163005 Score E Sequences producing significant alignments: (Bits) Value seq57 102 8e-17 >seq57 Length=574579 Score = 102 bits (112), Expect = 8e-17 Identities = 152/216 (70%), Gaps = 0/216 (0%) Strand=Plus/Minus Query 23500 AACAATAAACATGCAAAATCACAATGTAGGCCTTCATCCCTACTAATCAATTCATTAGAA 23559 |||||||| || || |||||| || || || ||||| | || | ||| || || Sbjct 521087 AACAATAAGCAGGCGAAATCAGTGTGGAGACCCTCATCACGCGAGATGAGTTCGTTGGAG 521028 Query 23560 AATGTTAATCCTGGCATTAATCCTCGTTTTTTAATCCAAAATATTGCAGCAAATGATCCG 23619 || || | || ||||| | || || ||||| | |||||| || | ||| |||| || Sbjct 521027 AAGGTCAGACCAGGCATGAGACCACGCTTTTTGAGCCAAAAGATGGAAGCGAATGCGCCA 520968 Query 23620 GAAAAGAAAATACCCTCAACAGCCGCAAAGGCCACAAGACGTGTACCAAATGTTGCATTA 23679 || ||||| || || |||||||| |||||||| || | |||| | |||| ||||| | Sbjct 520967 GAGAAGAAGATGCCTTCAACAGCAGCAAAGGCGACCAAACGTTCAGCAAAGGTTGCGTCC 520908 Query 23680 TAATCAGAAATCCAtttttttGTCCAATTAGCCTTC 23715 | ||||||||||| || | | ||| ||||||| Sbjct 520907 TGGTCAGAAATCCACTTCATGGCCCAGGCAGCCTTC 520872 Score = 89.7 bits (98), Expect = 5e-13 Identities = 176/260 (68%), Gaps = 3/260 (1%) Strand=Plus/Minus Query 23773 TCTGTTATATATGTATCAATTAGTAAACTATACATTTCAGAATGAATATTTTCAATAGCA 23832 ||| | | ||| || ||||| || | | ||||| || ||||||| ||| ||||| Sbjct 520475 TCTTTGACATAGGTGTCAATGAGAAGAGAGTACATCTCTGAATGAACATTCTCAATCATG 520416 Query 23833 ATCTGAAACCCATAAAAACATCTAGCTTCAGACAATTGAACATCATTAAAAAATCTTTTA 23892 || || || |||||||| ||||| ||||||| | || || ||||| | || | || Sbjct 520415 ATTTGGAAGCCATAAAAGCATCTTGCTTCAGGGATCTGGACCTCATTCGAGAAACGTTCC 520356 Query 23893 GCTAAATTTTCGTTAACAATACCATCACTAGCAGCAAAGAAAGCAAGAACATATTTTATA 23952 | || || || ||||||||||| |||||||||||||| || || | | | | Sbjct 520355 AAGAGGTTCTCATTCACAATACCATCGCTAGCAGCAAAGAAGGCCAGGATGTGTGAAACG 520296 Query 23953 AAATGTCTTTCATCAGTTGATAA---TTTTTTCCAATCATTAATATCTTTTGATAAATCA 24009 || || |||||| || || |||| ||| |||| || || || || | ||| Sbjct 520295 AAGAATCGTTCATCTTCTGTCAAACGGTTTTCCCAGTCATGCATGTCCTTGGAAAGATCT 520236 Query 24010 ACTTCATCAACTGTCCAAAA 24029 ||||| ||| | ||||| || Sbjct 520235 ACTTCCTCAGCAGTCCAGAA 520216 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 521487100433200