Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lobosporangium_20transversale_20[genbank_20GCA_5F002105155.1_202017- 04-20] 138 sequences; 42,768,949 total letters Query= NC_033423.1 Length=208501 Score E Sequences producing significant alignments: (Bits) Value seq131 86.0 8e-12 seq117 84.2 3e-11 >seq131 Length=59030 Score = 86.0 bits (94), Expect = 8e-12 Identities = 103/140 (74%), Gaps = 0/140 (0%) Strand=Plus/Minus Query 63754 ATAGGTGATAAATTTGCTTCTTTTACAGCTCAAAAAGGTACGTGTGGTATGATTTATCGA 63813 || ||||| |||||||| || | | |||||||||||| |||||| | |||||| Sbjct 32273 ATGGGTGACAAATTTGCATCCCGTCACGGTCAAAAAGGTACCATTGGTATCACTTATCGT 32214 Query 63814 CAAGAAGATATGCCTTTTACCAAAGACGGTATCGTACCCGATCTCGTCATCAATCCACAC 63873 || || || ||||||||||| ||| ||||| ||| ||| || ||||||| ||||| Sbjct 32213 CAGGAGGACATGCCTTTTACAGCAGAGGGTATTACACCTGATATCATCATCAACCCACAT 32154 Query 63874 GCTTTTCCCAGTCGTATGAC 63893 || |||| |||||||| Sbjct 32153 GCCATTCCTTCACGTATGAC 32134 >seq117 Length=942176 Score = 84.2 bits (92), Expect = 3e-11 Identities = 132/189 (70%), Gaps = 0/189 (0%) Strand=Plus/Minus Query 155864 GTGCACCTTTAAAATTTGAAGACGCCCCTTTTCATCGGGTAATCCAATTTCTATCTTCAA 155923 ||| | ||| | ||| ||||| || || | ||||| |||||||||||||| || | | Sbjct 442614 GTGAATCTTCAGAATCTGAAGTCGACCATGCTCATCTGGTAATCCAATTTCCATGTGGAC 442555 Query 155924 TTCCAACCGCCCAGGTCTTAATAATGCTTCGTCAATTAAGTCGGGTCTGTTGGTCATACC 155983 ||||| || || || | || || || || || || | || |||||||||||||| Sbjct 442554 TTCCATACGTCCTGGACGCAACAAGGCCTCATCGATCATATCCTTCCTGTTGGTCATACC 442495 Query 155984 TATGATTAAAATGTTGTTTAAAGATTCTACACCGTCTATTTTAGACAATAATTGATTGAC 156043 || |||||||| || || || ||||| || || || || | ||| | ||||| || Sbjct 442494 GATAATTAAAATATTATTCAACTGCTCTACGCCATCCATCTTTGCCAAAAGCTGATTCAC 442435 Query 156044 TACGGCGTC 156052 || | ||| Sbjct 442434 AACCGAGTC 442426 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 667074049295280