Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mortierella_20alpina_20[genbank_20GCA_5F001021685.1_202015-06-08] 1,962 sequences; 36,305,198 total letters Query= NC_001611.1 Length=185578 Score E Sequences producing significant alignments: (Bits) Value seq1939 210 3e-49 seq1263 118 1e-21 >seq1939 Length=69097 Score = 210 bits (232), Expect = 3e-49 Identities = 601/912 (66%), Gaps = 14/912 (2%) Strand=Plus/Plus Query 53759 ATCTCAGTGCAAAGATTACTACACTTGATGGTTCCTAAATTTTGTTGATTACTCTTTTTG 53818 ||||| ||||| | || ||||| |||||||| || ||||| || || ||| | Sbjct 2020 ATCTCTGTGCACAAGTTGGAGCACTTAATGGTTCCCAAGTTTTGCTGGTTGGACTTGCGG 2079 Query 53819 TTACACGCATCCTTATAAAGAATGAATGGCGTACCAGTTTCAATCTGGGATTCTATAATC 53878 || || |||||||| ||||| || | ||||| || || || | || | || | |||| Sbjct 2080 TTGCAGGCATCCTTGTAAAGCATATAGGGCGTTCCCGTCTCGGTTTGCGCCTCCAAAATC 2139 Query 53879 GCTTTCCAGACGACACGAGCCTTTATTATAGATTTGTATCTCTTTTCTCTTTC--GTATA 53936 || | ||| | ||||||| || | ||| | | ||| ||| ||| Sbjct 2140 GCATACCACAACTTTTGAGCCTTGATAGTC--TTTCGGGCGCGACCCTCCTTCTCGTACC 2197 Query 53937 GTGTATACAATCGTTCAAACTCGTCTCCCCAAACATTGTCCAATCCAGGACATTCATCCG 53996 | || | |||||||| || |||||||||| | | || || ||| | | Sbjct 2198 GGTGGTAGAGCTCCTCAAACTCCTCGCCCCAAACATCTTGAAGGCCGGGGGCCTCAGCAG 2257 Query 53997 GACACATCAACGACCACTCTCCGTCATCCTTCACT-CGTTTCATAAAGAGATCAGGAATC 54055 | || | || ||| ||||| | || |||| | || ||||| || ||||| || ||| Sbjct 2258 GGCAGAACAGACTCCAGTCTCCATTTTC-TTCAATGCGCTTCATGAACAGATCGGGGATC 2316 Query 54056 CAAAGAGCTATA-AATAGATCTCTGGTTCTATGTTCCTCGTTTCCTGTATTCTTTTTAAG 54114 || || || ||| || ||||| | || | || || ||||| || ||||| ||| Sbjct 2317 CAGAGGGC-ATAGAACAGATCACGGGCACGGGACTCTTCCTTTCCAGTGTTCTTGCGAAG 2375 Query 54115 ATCGAGGAACGCCATAATATCAGAATGCCACGGTTCCAAGTATATGGTCATAACTCCAGG 54174 || | ||| | | | || | ||||| || || | ||| |||| | | || || Sbjct 2376 GTCCAAAAACTCAAAGACGTCTGCGTGCCAAGGCTCGAGGTACATGGCGAACGCACCTGG 2435 Query 54175 CCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGG 54234 || ||||| || |||||||| | || | || ||||| || || || | | ||| || Sbjct 2436 GCGCTTGTTGCCACCCTGATCGACATAACGGGCAGTGTTGTTGTACACGCGAAGCATAGG 2495 Query 54235 AATAATACCATTGGATGCACCATTGGTCCCGGAGATATAGCTTCCACTGGCACGAATATT 54294 ||||| |||||||| || ||||| || | || || ||| ||| ||||| || Sbjct 2496 AATAAGGCCATTGGAGTATCCGTTGGTTCCAGCAATGTATGATCCCGAGGCGCGAATGTT 2555 Query 54295 ACTAATTGATAGACCTATCCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGT 54354 ||| ||||| || || || ||| | || ||||| | ||||| || ||||| Sbjct 2556 GTGAATGTTCAGACCGATTCCTCCAGCCGTCTTGGAGATCATGGCGCAGGTCTTCAACGT 2615 Query 54355 ATCATAGATGCCCTCTATACTATCATCCATCATGTTAAGTAGAAAACAGCTAGACATTTG 54414 |||||||| ||||| || ||| ||| ||||| | || | || ||||| ||||| || Sbjct 2616 GTCATAGATACCCTCGATCGAATCGTCCTTCATGGTCAGCAAGAAGCAGCTCGACATCTG 2675 Query 54415 GTGACGACTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGA 54474 | | | ||||| || ||||| | || || ||||| || || || | ||||| || Sbjct 2676 GGGTCTGGGGGTTCCGGCGTTAAAGAGAGTGGGCGAAGCATGAGTGAAGAACTTTTCCGA 2735 Query 54475 AA-GTAGATTGTACGTCTCGATAGCTGAGTCTATATCCCATTG--ATGAATTCCTACTGC 54531 | |||| ||||| ||||||||||| || | || ||| | || ||||| || | Sbjct 2736 CATGTAG-TTGTAGGTCTCGATAGCCTTCTCGACAT--CATCGCCGTGGATTCCGACAGA 2792 Query 54532 GACACGCATTAACATGTGCTGAGGTCTTTCAACGATCTTGTTGTTTATTTTCAGCAAGTA 54591 ||||||||| ||||| ||||||||||| || ||| |||| || || |||| ||| Sbjct 2793 GACACGCATCAACATATGCTGAGGTCTCTCTGCGACCTTGCCGTCGATGCGGAGCAGGTA 2852 Query 54592 GGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTATGAAAAGTCTCGTTCGTAAATAAT 54651 || ||||| || || || ||||| |||||||| ||||| || ||||| || || Sbjct 2853 CGAGCGCTCCAAGGTCTTGAATCCAAAGTAGTTGTAGTTGAAGTCGCGGTCGTAGATGAT 2912 Query 54652 AACTGAGTTGAG 54663 | ||||| || Sbjct 2913 GGCAGAGTTCAG 2924 >seq1263 Length=39644 Score = 118 bits (130), Expect = 1e-21 Identities = 118/153 (77%), Gaps = 0/153 (0%) Strand=Plus/Plus Query 24131 CAAACATGCGAAATCGCAGTGTAGACCCTCGTCTCTACTAATTAATTCGTTGGAAAACGT 24190 ||| || || || ||| ||| ||||||||||| | | || | ||||| || || || Sbjct 12827 CAAGCAGGCAAAGTCGGTGTGGAGACCCTCGTCACGAGAGATGAGCTCGTTCGAGAAGGT 12886 Query 24191 GAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGATCCAGAAAA 24250 ||| |||||||| || |||||||| || ||||| || ||||| || || |||||||| || Sbjct 12887 GAGGCCGGGCATGAGACCACGCTTCTTGAGCCAGAAGATGGAGGCGAACGATCCAGAGAA 12946 Query 24251 GAAAATTCCTTCTACTGCCGCAAAGGCAATAAG 24283 ||| || ||||| || || |||||||||| ||| Sbjct 12947 GAAGATACCTTCGACGGCGGCAAAGGCAACAAG 12979 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 593707038977760