Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mortierella_20alpina_20[genbank_20GCA_5F001021685.1_202015-06-08] 1,962 sequences; 36,305,198 total letters Query= NC_001875.2 Length=131995 Score E Sequences producing significant alignments: (Bits) Value seq1237 113 4e-20 seq1899 95.1 1e-14 >seq1237 Length=85294 Score = 113 bits (124), Expect = 4e-20 Identities = 161/227 (71%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 20949 CCCCCTCGCAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCC 21008 || || || || | ||| |||| || | || |||||||| || || || ||||| | Sbjct 35485 CCACCACGGAGACGGAGGACCAAGTGAAGGGTCGACTCCTTCTGGATATTGTAGTCAGAG 35544 Query 21009 AGGGTTTGGGCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGC 21068 ||||| || ||||||| ||||| ||||| ||| | || || | ||||||||| ||| Sbjct 35545 AGGGTACGGCCGTCCTCGAGCTGCTTGCCGGCAAAGATGAGACGCTGCTGGTCTGGGGGA 35604 Query 21069 ACGCCTTCCTTGTCGGCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCGTT 21128 | ||| |||||||| |||||| || || || | | | | || || | |||| Sbjct 35605 ATGCCCTCCTTGTCTTGGATCTTCTGCTTGACATTGTCAATGGTGTCCGAAGACTCCACC 35664 Query 21129 TCCACGGTAATGGTCTTGCCGGTTAACGTTTTGACAAATATTTGCAT 21175 |||| || |||||||||||||| || || ||||| || || ||||| Sbjct 35665 TCCAACGTGATGGTCTTGCCGGTCAAGGTCTTGACGAAAATCTGCAT 35711 Score = 89.7 bits (98), Expect = 4e-13 Identities = 156/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 20949 CCCCCTCGCAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCC 21008 || || || || | ||| |||| || | || |||||||| ||||| || ||||| | Sbjct 36020 CCACCACGGAGACGGAGGACCAAGTGAAGGGTCGACTCCTTCTGAATATTGTAGTCAGAG 36079 Query 21009 AGGGTTTGGGCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGC 21068 ||||| || ||||||| ||||| ||||| || | || || | ||||||||| || Sbjct 36080 AGGGTACGGCCGTCCTCGAGCTGCTTGCCGGCGAAGATGAGACGCTGCTGGTCTGGAGGG 36139 Query 21069 ACGCCTTCCTTGTCGGCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCGTT 21128 | || |||||||| ||||| || || || | | | | || || | ||| Sbjct 36140 ATACCCTCCTTGTCTTGAATCTTCTGCTTGACGTTGTCAATGGTGTCCGAAGACTCGACC 36199 Query 21129 TCCACGGTAATGGTCTTGCCGGTTAACGTTTTGACAAATATTTGCAT 21175 || | ||| |||||||||||||| | || ||||| || || ||||| Sbjct 36200 TCGAGGGTGATGGTCTTGCCGGTAAGGGTCTTGACGAAAATCTGCAT 36246 >seq1899 Length=11869 Score = 95.1 bits (104), Expect = 1e-14 Identities = 117/160 (73%), Gaps = 0/160 (0%) Strand=Plus/Plus Query 20949 CCCCCTCGCAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCC 21008 || || || || | ||| |||| || | |||||||||||| || ||||| ||||||| Sbjct 5715 CCACCACGGAGACGGAGGACCAAGTGAAGAGTGGACTCCTTCTGGATGTTGTAGTCCGAG 5774 Query 21009 AGGGTTTGGGCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGC 21068 ||||| || ||||||| ||||| ||||| ||| | || || | ||||||||| ||| Sbjct 5775 AGGGTGCGGCCGTCCTCAAGCTGCTTGCCGGCAAAGATGAGGCGCTGCTGGTCTGGGGGG 5834 Query 21069 ACGCCTTCCTTGTCGGCGATCTTTTGTTTCACCTGGCCGA 21108 | || ||||| || |||||| || || || | | ||| Sbjct 5835 ATACCCTCCTTATCTTGGATCTTCTGCTTGACGTTGTCGA 5874 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 422249102990792