Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mortierella_20alpina_20[genbank_20GCA_5F001021685.1_202015-06-08] 1,962 sequences; 36,305,198 total letters Query= NC_001973.1 Length=161046 Score E Sequences producing significant alignments: (Bits) Value seq1263 194 2e-44 seq1899 141 1e-28 seq1237 114 1e-20 seq1254 84.2 2e-11 >seq1263 Length=39644 Score = 194 bits (214), Expect = 2e-44 Identities = 287/404 (71%), Gaps = 2/404 (0%) Strand=Plus/Minus Query 117027 CCTTCGGCGAGCGCCTGGTGGCCTTCGCGGCCGTCGAGGGCGTCTTCTTTTCGGGCAGTT 117086 |||| | ||||| || || ||||| || |||||||| || ||||||| || || | Sbjct 12993 CCTTTGCTGAGCGTCTTGTTGCCTTTGCCGCCGTCGAAGGTATCTTCTTCTCTGGATCGT 12934 Query 117087 TCGCCGCCATATTTTGGCTCAAGAAACGCGGCCTCATGCCCGGCCTGACTTTCAGCAACG 117146 ||||| |||| || ||||||||||| || || |||||||||||||| || ||| |||| Sbjct 12933 TCGCCTCCATCTTCTGGCTCAAGAAGCGTGGTCTCATGCCCGGCCTCACCTTCTCGAACG 12874 Query 117147 AGCTCATCTCCAGGGACGAGGGTCTGCATTGCGACTTTGCCTGTTTGCTGTTCAAGCATT 117206 |||||||||| | ||||||||||| || |||||||||||| ||||| ||| || Sbjct 12873 AGCTCATCTCTCGTGACGAGGGTCTCCACACCGACTTTGCCTGCTTGCTCTTCTCGCTCA 12814 Query 117207 TGGTGCAGCGACCGAGCGCGGCGCGCGTCAGGGAGATCGTCACCGACGCGGTCGCCATCG 117266 || | || || | | ||| ||| | || ||| ||||||| || |||||||||| Sbjct 12813 TGAAGAGCCGTCCTGACCAGAAGCGTGTCTGTGACATCATCACCGAGGCTGTCGCCATCG 12754 Query 117267 AGCAGCGCTTCCTCACCGAAGCGCTGCCGGTGCGTCTGCTGGGACTCAATTGCGAAAC-G 117325 |||| |||||||| || || || || || ||| | || | || || || | Sbjct 12753 AGCAAGAGTTCCTCACGGATGCTCTCCCCGTCATGCTGATCGGCATGAA-CGCCAAGCTC 12695 Query 117326 ATGTCGCAATACATCGAGTTCGTCGCCGACAGGCTGCTGCTCGAGCTGGTCGGCGCCAAG 117385 ||| ||| ||||||||||| || || ||| | ||||| ||| || | | ||||| Sbjct 12694 ATGAAGCAGTACATCGAGTTTGTTGCTGACCGTCTGCTCGTCGCTCTCGGTAACCCCAAG 12635 Query 117386 CACTACAACACGCCCAACCCGCTGGACTTTATGAACCTCATCTC 117429 || |||||| ||||| | ||||||||| || | ||||| Sbjct 12634 CATTACAACGTCGAGAACCCCTTCGACTTTATGGACTTGATCTC 12591 Score = 187 bits (206), Expect = 3e-42 Identities = 250/347 (72%), Gaps = 3/347 (1%) Strand=Plus/Minus Query 116576 GAGCCGCTGCTGCGCGAGAACCCCCGCCGGTTCGTGATTTTCCCCATACAATACCCGGAC 116635 ||||| | || ||| ||||| || || ||||| | |||||||| | | || || Sbjct 13839 GAGCCCATCCTCCGCCCTAACCCTCGTCGCTTCGTCCTCTTCCCCATCAAGTTCCACGAG 13780 Query 116636 ATGTGGCGCATGTACAAAAAGGCCGAGGCGTCGTTCTGGACCGTCGAGGAGGTGGACCTG 116695 | |||| |||||||| ||||| ||||| || |||||||| | || ||||| || || Sbjct 13779 GTCTGGCAGATGTACAAGAAGGCTGAGGCCTCCTTCTGGACTGCTGAAGAGGTCGATCTC 13720 Query 116696 TCCAAGGACACGAGCGACTGGGAG---CGCTTGAACGACAACGAGCGCCATTTCATCAAG 116752 |||||||||| | |||||||||| ||| || | | ||||||| || || | Sbjct 13719 TCCAAGGACATGCACGACTGGGAGAACCGCATGTCTGCCGACGAGCGATTCTTTGTCTCG 13660 Query 116753 CACGTGCTGGCCTTTTTCGCCGCCAGCGACGGCATCGTCAACGAGAATCTGGTCGAGCGT 116812 ||| | ||||| || ||||| ||||| |||||||| ||||||||||| || | ||||| Sbjct 13659 CACATCCTGGCTTTCTTCGCTGCCAGTGACGGCATTGTCAACGAGAACTTGCTTGAGCGA 13600 Query 116813 TTCGCTCAGGAGGTGCAGGTGGCCGAGGCGCGGTGCTTCTACGGCTTTCAGATCGCCATG 116872 ||| | | ||||| ||| | | ||||| | ||||| ||||| || |||||| || Sbjct 13599 TTCTCGAACGAGGTCCAGATCCCAGAGGCAAGATGCTTTTACGGATTCCAGATCATGATT 13540 Query 116873 GAGAACGTGCACTCGGAAATGTATTCGACCCTCATCGACACGTACGT 116919 ||||| || ||||| || ||||| ||| | | || ||||| ||||| Sbjct 13539 GAGAATGTCCACTCTGAGATGTACTCGCTCTTGATTGACACATACGT 13493 >seq1899 Length=11869 Score = 141 bits (156), Expect = 1e-28 Identities = 156/205 (76%), Gaps = 2/205 (1%) Strand=Plus/Minus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 ||||| || ||||| || || || || || || ||||||||| |||| ||||| | || Sbjct 5713 ATGCAGATTTTCGTCAAGACCCTGACTGGTAAGACCATCACCCTCGAGGTCGAGTCGTCC 5654 Query 40750 GACAGCGTGCA-AACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCA 40808 || | | | | |||| ||||| | || |||| ||||| |||||||||||| | ||||| Sbjct 5653 GATACCATCGATAACG-TCAAGCAGAAGATTCAGGACAAGGAGGGCATCCCCCCAGACCA 5595 Query 40809 GCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 40868 ||| || ||||||| || ||||| ||||| || |||| || |||||| || ||||| Sbjct 5594 GCAGCGTCTCATCTTTGCCGGCAAGCAGCTCGAGGACGGCCGTACCCTCTCTGATTACAA 5535 Query 40869 CATCCAGAAGGAGGCCACGCTGCAT 40893 ||||||||||||| | || || ||| Sbjct 5534 CATCCAGAAGGAGTCGACCCTCCAT 5510 Score = 114 bits (126), Expect = 1e-20 Identities = 127/167 (76%), Gaps = 2/167 (1%) Strand=Plus/Minus Query 40727 TCACCGTCGACGTCGAAGCCACCGACAGCGTGCA-AACGCTCAAGGAAAAAATTCTCGAC 40785 ||||| |||| ||||| | | |||| | | | |||| ||||| | || || | || Sbjct 5904 TCACCCTCGAGGTCGAGTCGTCGGACACCATCGACAACG-TCAAGCAGAAGATCCAAGAT 5846 Query 40786 AAAGAGGGCATCCCCGCGGACCAGCAACGACTCATCTACGCGGGCAAACAGCTGGACGAC 40845 || ||||| |||||| | |||||||| || ||||||| || ||||| ||||| || ||| Sbjct 5845 AAGGAGGGTATCCCCCCAGACCAGCAGCGCCTCATCTTTGCCGGCAAGCAGCTTGAGGAC 5786 Query 40846 GAGCGCACCCTCAACGACTACAACATCCAGAAGGAGGCCACGCTGCA 40892 | ||||||||| ||||||||||||||||||||| |||| || || Sbjct 5785 GGCCGCACCCTCTCGGACTACAACATCCAGAAGGAGTCCACTCTTCA 5739 >seq1237 Length=85294 Score = 114 bits (126), Expect = 1e-20 Identities = 147/203 (72%), Gaps = 0/203 (0%) Strand=Plus/Minus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 ||||| || ||||| || || | || ||||| |||||||| | || || || | | Sbjct 35711 ATGCAGATTTTCGTCAAGACCTTGACCGGCAAGACCATCACGTTGGAGGTGGAGTCTTCG 35652 Query 40750 GACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAG 40809 |||| | | | | ||||| | || || | ||||| |||||||| ||| | |||||| Sbjct 35651 GACACCATTGACAATGTCAAGCAGAAGATCCAAGACAAGGAGGGCATTCCCCCAGACCAG 35592 Query 40810 CAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 40869 || || ||||||| || ||||| ||||| || |||| || |||||| |||||||| Sbjct 35591 CAGCGTCTCATCTTTGCCGGCAAGCAGCTCGAGGACGGCCGTACCCTCTCTGACTACAAT 35532 Query 40870 ATCCAGAAGGAGGCCACGCTGCA 40892 |||||||||||| | || || || Sbjct 35531 ATCCAGAAGGAGTCGACCCTTCA 35509 Score = 105 bits (116), Expect = 7e-18 Identities = 125/167 (75%), Gaps = 2/167 (1%) Strand=Plus/Minus Query 40727 TCACCGTCGACGTCGAAGCCACCGACAGCGTGCA-AACGCTCAAGGAAAAAATTCTCGAC 40785 ||||| |||| ||||| | | |||| | | | |||| ||||| | || || | || Sbjct 35902 TCACCCTCGAGGTCGAGTCGTCGGACACCATCGACAACG-TCAAGCAGAAGATCCAAGAT 35844 Query 40786 AAAGAGGGCATCCCCGCGGACCAGCAACGACTCATCTACGCGGGCAAACAGCTGGACGAC 40845 || ||||| |||||| | |||||||| || ||||||| || ||||| ||||| || ||| Sbjct 35843 AAGGAGGGTATCCCCCCAGACCAGCAGCGTCTCATCTTTGCCGGCAAGCAGCTTGAGGAC 35784 Query 40846 GAGCGCACCCTCAACGACTACAACATCCAGAAGGAGGCCACGCTGCA 40892 | || |||||| ||||||||||||||||||||| | || || || Sbjct 35783 GGCCGTACCCTCTCTGACTACAACATCCAGAAGGAGTCGACCCTTCA 35737 >seq1254 Length=67957 Score = 84.2 bits (92), Expect = 2e-11 Identities = 79/101 (78%), Gaps = 0/101 (0%) Strand=Plus/Plus Query 40792 GGCATCCCCGCGGACCAGCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGC 40851 || || ||| | |||||||| || ||||||| ||| ||||| ||||| || || | ||| Sbjct 3263 GGTATTCCCCCAGACCAGCAGCGCCTCATCTTCGCCGGCAAGCAGCTTGAGGATGGCCGC 3322 Query 40852 ACCCTCAACGACTACAACATCCAGAAGGAGGCCACGCTGCA 40892 || ||| ||||||||||||||||||||| | || || || Sbjct 3323 ACTCTCTCGGACTACAACATCCAGAAGGAGTCGACCCTCCA 3363 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 515206564249120