Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mortierella_20alpina_20[genbank_20GCA_5F001021685.1_202015-06-08] 1,962 sequences; 36,305,198 total letters Query= NC_002687.1 Length=335593 Score E Sequences producing significant alignments: (Bits) Value seq233 120 7e-22 seq1939 95.1 3e-14 seq1263 87.8 4e-12 >seq233 Length=20720 Score = 120 bits (132), Expect = 7e-22 Identities = 135/181 (75%), Gaps = 0/181 (0%) Strand=Plus/Plus Query 254200 GCTGTCCGCCTTTCAAGCTCGTGATCCTGGACGAGGCGGACACCATGACGGCCGACGCGC 254259 ||||||| |||| |||| || | ||| |||| ||||| ||| | ||||| | ||||| | Sbjct 19400 GCTGTCCACCTTACAAGATCATTATCTTGGATGAGGCCGACTCGATGACCTCGGACGCCC 19459 Query 254260 AGTCCGCCCTCCGCCGAACGATGGAGACGCACTCCGTTGTGACGCGTTTTTGCCTGGTGT 254319 |||| || ||| | ||||||||||||| | ||| | || ||||| || ||| | | Sbjct 19460 AGTCAGCGCTCAGGAGAACGATGGAGACCTATTCCAAGCTCACACGTTTCTGTCTGATCT 19519 Query 254320 GCAACTACGTGTCGAAGATCATCGCCCCGCTGGCTTCTCGGTGCGCCAAGTTTCGATTCA 254379 |||| ||||| || ||||||| || ||||| || || |||||||||||||| || | Sbjct 19520 GCAATTACGTCACGCGCATCATCGAGCCTCTGGCCTCCCGCTGCGCCAAGTTTCGCTTTA 19579 Query 254380 G 254380 | Sbjct 19580 G 19580 >seq1939 Length=69097 Score = 95.1 bits (104), Expect = 3e-14 Identities = 271/411 (66%), Gaps = 8/411 (2%) Strand=Plus/Minus Query 248770 AACGCGCACCTCCTGGACGGCGCGATTGACTACGGCAAAGATTTGGAGTACGATTTCTTT 248829 ||||| ||| |||| || || || ||||| | || || | ||| | | |||| Sbjct 2936 AACGCCGACCGCCTGAACTCTGCCATCATCTACGACCGCGACTTCAACTACAACTACTTT 2877 Query 248830 GCTTTCAAAACGCTGGAGAAATCGTATCTCCTCAAAATTGATGGCAAGATCGTGGAACGA 248889 | ||||| || ||||| ||||| || ||| || || |||||| ||| || || Sbjct 2876 GGATTCAAGACCTTGGAGCGCTCGTACCTGCTCCGCATCGACGGCAAGGTCGCAGAGAGA 2817 Query 248890 ATTCAGCACATGTTGATGCGAGTGGCTGTCGGGATTCACAAGGATGACATAGAGAGCGTG 248949 |||||| ||||||||||| || ||||||| || ||| ||||| | |||| | Sbjct 2816 CCTCAGCATATGTTGATGCGTGTCTCTGTCGGAATCCACGGCGATGATGTCGAGAAGGCT 2757 Query 248950 CTCGAGACGTACACCGGAATGAGTGAACGCTGGATGACACATGCCACACCGACGCTCTTC 249009 ||||||| |||| | ||| ||| | | || ||||| | || || ||||| Sbjct 2756 ATCGAGACCTACAACTACATGTCGGAAAAGTTCTTCACTCATGCTTCGCCCACTCTCTTT 2697 Query 249010 AACGCCGGTACCGTCAACAATCAGCTGAGCTCGTGCT--TTCTT-CTTGCCATGCAAGAC 249066 |||||||| ||| || ||| || ||| ||| ||||| || ||||| | ||| Sbjct 2696 AACGCCGGAACCCCCAGACCCCAGATG---TCGAGCTGCTTCTTGCTGACCATGAAGGAC 2640 Query 249067 GACTCTGTCGACGGCATTTATGACACGCTTAA-ACAGACGGCGAAGATTTCTAAATTCGC 249125 || || |||| || || ||||||||| | || || | || | ||| || || || Sbjct 2639 GATTCGATCGAGGGTATCTATGACACGTTGAAGACCTGC-GCCATGATCTCCAAGACGGC 2581 Query 249126 GGGCGGAATCGGTCTCTCCGTCTCCAACATCCGAGCGAAGGGTTCGTACAT 249176 || ||||||||||| | | |||||| || || ||| || ||||| Sbjct 2580 TGGAGGAATCGGTCTGAACATTCACAACATTCGCGCCTCGGGATCATACAT 2530 >seq1263 Length=39644 Score = 87.8 bits (96), Expect = 4e-12 Identities = 123/173 (71%), Gaps = 0/173 (0%) Strand=Plus/Plus Query 157274 TTCTCAAAAAAGTTGGTCTTTCCCTGGAGAGAAATCATGTCCATCCACTCGAATGGGTTG 157333 |||||||| ||||||||||| |||||||| || |||| |||||| | ||||| ||||| Sbjct 12561 TTCTCAAAGAAGTTGGTCTTGCCCTGGAGTGAGATCAAGTCCATAAAGTCGAAGGGGTTC 12620 Query 157334 GCGCAGTTGTACACCTTGTCGTACCCCAGCTGGTTCAGCCAGTAGTCCGCCACAAACTTG 157393 || |||||| |||| || || || | ||| ||| || ||||||| | Sbjct 12621 TCGACGTTGTAATGCTTGGGGTTACCGAGAGCGACGAGCAGACGGTCAGCAACAAACTCG 12680 Query 157394 ATGTACTCTGTCATGCTCTTCTCGCTGATACCGATGAGCGCGACGGGAAGCGC 157446 ||||||| ||||| ||| || | || ||||| ||| |||||| || || Sbjct 12681 ATGTACTGCTTCATGAGCTTGGCGTTCATGCCGATCAGCATGACGGGGAGAGC 12733 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1073739407526016