Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mortierella_20alpina_20[genbank_20GCA_5F001021685.1_202015-06-08] 1,962 sequences; 36,305,198 total letters Query= NC_003310.1 Length=196858 Score E Sequences producing significant alignments: (Bits) Value seq1939 187 3e-42 seq1263 125 9e-24 seq1142 84.2 3e-11 >seq1939 Length=69097 Score = 187 bits (206), Expect = 3e-42 Identities = 822/1281 (64%), Gaps = 34/1281 (3%) Strand=Plus/Plus Query 62626 CATATGTATCATATGGTCCTTCCTTCTCAGCTAGTTTACAACTCGCCTCTAATGCACCGT 62685 |||| || ||||| | || |||| || || |||| || ||||| || ||| ||| Sbjct 1649 CATAGGTCTCATACGTGCCCTCCTCCTGGGCCAGTTCGCAGGATGCCTCCAAGGCAGCGT 1708 Query 62686 AATAAATGGTTTCAAAGATCTTCTTATTTAGATCTTGTGCTTCCGGGCTATCAAATGG-A 62744 || |||||||||||||||| | | || | | | || || || |||||| || | Sbjct 1709 GGTAGATGGTTTCAAAGATCTGCGTGTTCAAGACGCGAGCCTCTGGCGAATCAAAGGGCA 1768 Query 62745 TA---ATTTAAGAGAATAAACGCGTCCGCTAATCCTTGAACACCAATACCGATAGGTCTA 62801 | || | |||| ||||| || |||||||||||||| | ||| || || | | Sbjct 1769 TGCGCATCTTGATGAAT----GCGTCAGCCAATCCTTGAACACCCACACCAATGGGGCGA 1824 Query 62802 TGTCTCTTATTAGAGATTTCAGCTTCTGGAATAGGATAATAATTAATATCTATAATTTTA 62861 || | | | || || || || || |||| || || ||||| | ||| || || || Sbjct 1825 TGACGCATGTTGGACCGCTCGGCCTCGGGAACCGGGTAGTAATTCACATCAATGATCTTG 1884 Query 62862 TTGAGATTTCTGACAATTACTTTGACCACATCCTTCAGTTTGAGAAAATCAAA-TCGCCC 62920 || ||||| | | | || ||| || ||| | ||| | | || ||| | Sbjct 1885 TTTAGATTGCGGGTGACGACCTTGGTGAC---CTTGTG---GAGCATCTTGAAGTCGTAC 1938 Query 62921 ATCTATT-----ACAAACATGTTCAATGCAACAGATGCCAGATTACACACGGCTACCTCA 62975 | || | |||||| || | || ||| |||| || ||||| || ||||| Sbjct 1939 ACCTGGTTGCTGACAAACGTGGGGAGAGCGACACTGGCCAAGTTGCACACAGCCACCTCG 1998 Query 62976 TTAGCATCCGCA-TATTGTATTATCTCAGTGCAAAGATTACTACACTTGATAGTTCCTAA 63034 | | | | || || | | ||||| ||||| | || ||||| || ||||| || Sbjct 1999 TCGGGA-CTGCTGTACTCGACAATCTCTGTGCACAAGTTGGAGCACTTAATGGTTCCCAA 2057 Query 63035 ATTTTGTTGATTACTCTTTTTGTTACACGCATCCTTATAAAGAATGAATGGAGTACCAGT 63094 ||||| || || ||| ||| || |||||||| ||||| || | || || || || Sbjct 2058 GTTTTGCTGGTTGGACTTGCGGTTGCAGGCATCCTTGTAAAGCATATAGGGCGTTCCCGT 2117 Query 63095 TTCAATCTGAGATTCTATAATCGCTTTCCAGACGACTCGAGCCTTTATTATAGATTTGTA 63154 || | || | || | |||||| | ||| | | ||||||| || | | | Sbjct 2118 CTCGGTTTGCGCCTCCAAAATCGCATACCACAACTTTTGAGCCTTGATAGTCTTTCGGGC 2177 Query 63155 TCTCCTTTCTCTTTCGTATAGAGTATACAATCGTTCGAACTCGTCTCCCCAAACATTGTC 63214 | | || | ||||| | || | || ||||| || |||||||||| | Sbjct 2178 GCGACCCTCCTTCTCGTACCGGTGGTAGAGCTCCTCAAACTCCTCGCCCCAAACATCTTG 2237 Query 63215 CAATCTAGGACATTCATCCGGACACATCAACGACCACTCTCCGTCATCCTTCACT-CGTT 63273 | | || ||| | || || | || ||| ||||| | || |||| | || | Sbjct 2238 AAGGCCGGGGGCCTCAGCAGGGCAGAACAGACTCCAGTCTCCATTTTC-TTCAATGCGCT 2296 Query 63274 TCATAAAGAGATCAGGAATCCAAAGAGCTATA-AATAGATCTCTTGTTCTATGTTCCTCG 63332 |||| || ||||| || ||||| || || ||| || ||||| | | | || || Sbjct 2297 TCATGAACAGATCGGGGATCCAGAGGGC-ATAGAACAGATCACGGGCACGGGACTCTTCC 2355 Query 63333 TTTCCTGTATTCTTTTTAAGATCGAGGAACGCCATAATATCAGAATGCCACGGTTCCAAG 63392 ||||| || ||||| ||| || | ||| | | | || | ||||| || || | | Sbjct 2356 TTTCCAGTGTTCTTGCGAAGGTCCAAAAACTCAAAGACGTCTGCGTGCCAAGGCTCGAGG 2415 Query 63393 TATATGGCCATAACTCCAGGCCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTA 63452 || ||||| | | || || || ||||| || |||||||| | || | || ||||| Sbjct 2416 TACATGGCGAACGCACCTGGGCGCTTGTTGCCACCCTGATCGACATAACGGGCAGTGTTG 2475 Query 63453 TTATAAACTCTCAACATTGGAATAATACCGTTTGA-TATACCATTGGTACCGGAGATATA 63511 || || || | | ||| ||||||| || || || ||| || ||||| || | || || Sbjct 2476 TTGTACACGCGAAGCATAGGAATAAGGCCATTGGAGTAT-CCGTTGGTTCCAGCAATGTA 2534 Query 63512 GCCTCCACTGGCACGAATATTACTAATTGATAGACCTATTCCCCCTGCCATTTTAGAGAT 63571 ||| ||| ||||| || ||| ||||| ||||| || ||| | || ||||| Sbjct 2535 TGATCCCGAGGCGCGAATGTTGTGAATGTTCAGACCGATTCCTCCAGCCGTCTTGGAGAT 2594 Query 63572 TAATGCGCATCGTTTTAACGTGTCATAGATGCCTTCTATGCTATCATCGATCATGTTAAG 63631 | ||||| || |||||||||||||| || || || ||| || ||||| | || Sbjct 2595 CATGGCGCAGGTCTTCAACGTGTCATAGATACCCTCGATCGAATCGTCCTTCATGGTCAG 2654 Query 63632 TAGAAAACAGCTAGACATTTGGTGACGAGTAGTTCCCGCATTAAATAAGGTAGGAGAAGC 63691 | || ||||| ||||| ||| | | | ||||| || ||||| | || || ||||| Sbjct 2655 CAAGAAGCAGCTCGACATCTGGGGTCTGGGGGTTCCGGCGTTAAAGAGAGTGGGCGAAGC 2714 Query 63692 GTGCGTAAACCATTTTTCAGA-AAGTAGATTGTACGTCTCAATAGCTGAGTCTATATCCC 63750 || || || | ||||| || | |||| ||||| ||||| ||||| || | || | Sbjct 2715 ATGAGTGAAGAACTTTTCCGACATGTAG-TTGTAGGTCTCGATAGCCTTCTCGACAT--C 2771 Query 63751 ATTG--ATGAATTCCTACTGCGACACGCATTAACATGTGCTGAGGTCTTTCAACAATTTT 63808 || | || ||||| || | ||||||||| ||||| ||||||||||| || | | || Sbjct 2772 ATCGCCGTGGATTCCGACAGAGACACGCATCAACATATGCTGAGGTCTCTCTGCGACCTT 2831 Query 63809 GTTGTTTATTTTCAACAAGTAGGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTATGA 63868 | || || | || ||| || ||||| || || || ||||| |||||||| Sbjct 2832 GCCGTCGATGCGGAGCAGGTACGAGCGCTCCAAGGTCTTGAATCCAAAGTAGTTGTAGTT 2891 Query 63869 AAAGTCTCGTTCGTAAATAAT 63889 ||||| || ||||| || || Sbjct 2892 GAAGTCGCGGTCGTAGATGAT 2912 >seq1263 Length=39644 Score = 125 bits (138), Expect = 9e-24 Identities = 156/213 (73%), Gaps = 3/213 (1%) Strand=Plus/Plus Query 33578 CAAACATGCGAAATCGCAGTGCAGACCCTCGTCTCTACTAATTAATTCGTTAGAAAACGT 33637 ||| || || || ||| ||| ||||||||||| | | || | ||||| || || || Sbjct 12827 CAAGCAGGCAAAGTCGGTGTGGAGACCCTCGTCACGAGAGATGAGCTCGTTCGAGAAGGT 12886 Query 33638 GAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGAAGCGAATGATCCGGAAAA 33697 ||| |||||||| || |||||||| || ||||| || ||||| ||||| ||||| || || Sbjct 12887 GAGGCCGGGCATGAGACCACGCTTCTTGAGCCAGAAGATGGAGGCGAACGATCCAGAGAA 12946 Query 33698 GAAGATTCCTTCTACTGCAGCAAAGGCAATAAGTCTCTCTCCATAACCGGCGCTGTCAT- 33756 |||||| ||||| || || |||||||||| ||| | ||| || | | | || ||| Sbjct 12947 GAAGATACCTTCGACGGCGGCAAAGGCAACAAGACGCTCAGCAAAGGTCGAGTTGGCATC 13006 Query 33757 --GTATCCACTTTTGAGCCCAATCGGCCTTCTT 33787 |||||||| | ||||| | |||||||| Sbjct 13007 CGAGATCCACTTCAGGGCCCAGGCAGCCTTCTT 13039 >seq1142 Length=49763 Score = 84.2 bits (92), Expect = 3e-11 Identities = 147/214 (69%), Gaps = 0/214 (0%) Strand=Plus/Minus Query 63591 GTGTCATAGATGCCTTCTATGCTATCATCGATCATGTTAAGTAGAAAACAGCTAGACATT 63650 ||||| ||||| || || || ||||| || ||| | | || ||||| || ||||| Sbjct 35615 GTGTCGTAGATACCCTCGATACTATCGTCTTGCATCTGGACAAGGAAACAACTCGACATC 35556 Query 63651 TGGTGACGAGTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCA 63710 ||| |||| | |||||| ||||| || | || || | ||||||||| || | || ||| Sbjct 35555 TGGGGACGCGGAGTTCCAGCATTGAACAGTGTCGGGGTAGCGTGCGTGAAGTACTTCTCA 35496 Query 63711 GAAAGTAGATTGTACGTCTCAATAGCTGAGTCTATATCCCATTGATGAATTCCTACTGCG 63770 || | | | ||| ||||||||||| | || || || | | || || || | | Sbjct 35495 GACATGAAGTGGTATGTCTCAATAGCAGCCTCAATGTCGCGTCCGTGGATGCCGATCGAA 35436 Query 63771 ACACGCATTAACATGTGCTGAGGTCTTTCAACAA 63804 || | ||| | ||| |||||||| | || |||| Sbjct 35435 ACTCTCATAATCATATGCTGAGGACGCTCGACAA 35402 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 629802153723360