Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mortierella_20alpina_20[genbank_20GCA_5F001021685.1_202015-06-08] 1,962 sequences; 36,305,198 total letters Query= NC_003389.1 Length=146454 Score E Sequences producing significant alignments: (Bits) Value seq1939 93.3 4e-14 >seq1939 Length=69097 Score = 93.3 bits (102), Expect = 4e-14 Identities = 150/216 (69%), Gaps = 0/216 (0%) Strand=Plus/Plus Query 38335 TTTAACGTATCAAATATACCTTCTATACTGTCATCCTTTATTGGTAGTATAAAACAACTA 38394 || ||||| ||| | ||||| || || || ||||| || | || | || || || Sbjct 2608 TTCAACGTGTCATAGATACCCTCGATCGAATCGTCCTTCATGGTCAGCAAGAAGCAGCTC 2667 Query 38395 GACATTTGAGGCAATGGAGTTCCGGCGTTAAATAATGTAGGAGATGCATGTATGAACCAT 38454 ||||| || || || |||||||||||||| | || || || ||||| |||| | Sbjct 2668 GACATCTGGGGTCTGGGGGTTCCGGCGTTAAAGAGAGTGGGCGAAGCATGAGTGAAGAAC 2727 Query 38455 TTTTCCGACAAATAATTATATGTTTCTATTACATCATCTATATCACCGCCGTGAATACCT 38514 |||||||||| || || || || || || | | || | |||| ||||||| || || Sbjct 2728 TTTTCCGACATGTAGTTGTAGGTCTCGATAGCCTTCTCGACATCATCGCCGTGGATTCCG 2787 Query 38515 AGAGATACCCTCATTAGCATATGTTGTGGTCTTTCT 38550 | ||| || | ||| | |||||| || ||||| ||| Sbjct 2788 ACAGAGACACGCATCAACATATGCTGAGGTCTCTCT 2823 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 468513309429280