Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mortierella_20alpina_20[genbank_20GCA_5F001021685.1_202015-06-08] 1,962 sequences; 36,305,198 total letters Query= NC_003391.1 Length=205719 Score E Sequences producing significant alignments: (Bits) Value seq1939 196 6e-45 seq1263 120 4e-22 >seq1939 Length=69097 Score = 196 bits (216), Expect = 6e-45 Identities = 600/913 (66%), Gaps = 16/913 (2%) Strand=Plus/Plus Query 65790 ATCTCAGTGCAAAGATTACTACACTTGATGGTTCCTAAATTTTGTTGATTACTCTTTTTG 65849 ||||| ||||| | || ||||| |||||||| || ||||| || || ||| | Sbjct 2020 ATCTCTGTGCACAAGTTGGAGCACTTAATGGTTCCCAAGTTTTGCTGGTTGGACTTGCGG 2079 Query 65850 TTACACGCATCCTTATAAAGAATGAATGGAGTACCAGTTTCAATCTGAGATTCTATAATC 65909 || || |||||||| ||||| || | || || || || || | || | || | |||| Sbjct 2080 TTGCAGGCATCCTTGTAAAGCATATAGGGCGTTCCCGTCTCGGTTTGCGCCTCCAAAATC 2139 Query 65910 GCTTTCCAGACGACTCGAGCCTTTATTATAGATTTGTATCTCTTTTCTCTTTC--GTATA 65967 || | ||| | | ||||||| || | ||| | | ||| ||| ||| Sbjct 2140 GCATACCACAACTTTTGAGCCTTGATAGTC--TTTCGGGCGCGACCCTCCTTCTCGTACC 2197 Query 65968 GTGTATACAATCGTTCGAACTCGTCTCCCCAAACATTGTCCAATCCAGGACATTCATCCG 66027 | || | || ||||| || |||||||||| | | || || ||| | | Sbjct 2198 GGTGGTAGAGCTCCTCAAACTCCTCGCCCCAAACATCTTGAAGGCCGGGGGCCTCAGCAG 2257 Query 66028 GACACATCAACGACCACTCTCCGTCATCCTTCACT-CGTTTCATAAAGAGATCAGGAATC 66086 | || | || ||| ||||| | || |||| | || ||||| || ||||| || ||| Sbjct 2258 GGCAGAACAGACTCCAGTCTCCATTTTC-TTCAATGCGCTTCATGAACAGATCGGGGATC 2316 Query 66087 CAAAGAGCTATA-AATAAATCTCTGGTTCTATGTTCCTCGTTTCCTGTATTCTTTTTAAG 66145 || || || ||| || | ||| | || | || || ||||| || ||||| ||| Sbjct 2317 CAGAGGGC-ATAGAACAGATCACGGGCACGGGACTCTTCCTTTCCAGTGTTCTTGCGAAG 2375 Query 66146 ATCGAGGAACGCCATAATATCATAATGCCACGGTTCCAAGTATATGGCCATAACTCCAGG 66205 || | ||| | | | || ||||| || || | ||| ||||| | | || || Sbjct 2376 GTCCAAAAACTCAAAGACGTCTGCGTGCCAAGGCTCGAGGTACATGGCGAACGCACCTGG 2435 Query 66206 CCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGG 66265 || ||||| || |||||||| | || | || ||||| || || || | | ||| || Sbjct 2436 GCGCTTGTTGCCACCCTGATCGACATAACGGGCAGTGTTGTTGTACACGCGAAGCATAGG 2495 Query 66266 AATAATACCATTGGATGTA-CCATTGGTCCCGGAGATATAGCTTCCACTTGCACGAATAT 66324 ||||| |||||||| ||| || ||||| || | || || ||| || ||||| | Sbjct 2496 AATAAGGCCATTGGA-GTATCCGTTGGTTCCAGCAATGTATGATCCCGAGGCGCGAATGT 2554 Query 66325 TACTAATTGATAGACCTATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACG 66384 | ||| ||||| ||||| || ||| | || ||||| | ||||| || |||| Sbjct 2555 TGTGAATGTTCAGACCGATTCCTCCAGCCGTCTTGGAGATCATGGCGCAGGTCTTCAACG 2614 Query 66385 TATCATAGATGCCCTCTATACTATCATCCATCATGTTAAGTAGAAAACAGCTAGACATTT 66444 | |||||||| ||||| || ||| ||| ||||| | || | || ||||| ||||| | Sbjct 2615 TGTCATAGATACCCTCGATCGAATCGTCCTTCATGGTCAGCAAGAAGCAGCTCGACATCT 2674 Query 66445 GGTGACGACTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAG 66504 || | | ||||| || ||||| | || || ||||| || || || | ||||| | Sbjct 2675 GGGGTCTGGGGGTTCCGGCGTTAAAGAGAGTGGGCGAAGCATGAGTGAAGAACTTTTCCG 2734 Query 66505 AAA-GTAGATTGTACGTCTCAATAGCTGAGTCTATATCCCATTGA--TGAATTCCTACTG 66561 | | |||| ||||| ||||| ||||| || | ||| || | || ||||| || | Sbjct 2735 ACATGTAG-TTGTAGGTCTCGATAGCCTTCTCGACATC--ATCGCCGTGGATTCCGACAG 2791 Query 66562 CGACACGCATTAACATGTGCTGAGGTCTTTCAACGATCTTGTTGTTTATTTTCAACAAGT 66621 ||||||||| ||||| ||||||||||| || ||| |||| || || | || || Sbjct 2792 AGACACGCATCAACATATGCTGAGGTCTCTCTGCGACCTTGCCGTCGATGCGGAGCAGGT 2851 Query 66622 AGGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTATGAAAAGTCTCGTTCGTAAATAA 66681 | || ||||| || || || ||||| |||||||| ||||| || ||||| || | Sbjct 2852 ACGAGCGCTCCAAGGTCTTGAATCCAAAGTAGTTGTAGTTGAAGTCGCGGTCGTAGATGA 2911 Query 66682 TAACCGAGTTGAG 66694 | | ||||| || Sbjct 2912 TGGCAGAGTTCAG 2924 >seq1263 Length=39644 Score = 120 bits (132), Expect = 4e-22 Identities = 122/159 (77%), Gaps = 0/159 (0%) Strand=Plus/Plus Query 36154 CAAACATGCGAAATCGCAGTGTAGACCCTCGTCTCTACTAATTAATTCGTTGGAAAACGT 36213 ||| || || || ||| ||| ||||||||||| | | || | ||||| || || || Sbjct 12827 CAAGCAGGCAAAGTCGGTGTGGAGACCCTCGTCACGAGAGATGAGCTCGTTCGAGAAGGT 12886 Query 36214 GAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGATCCAGAAAA 36273 ||| |||||||| || |||||||| || ||||| || ||||| || || |||||||| || Sbjct 12887 GAGGCCGGGCATGAGACCACGCTTCTTGAGCCAGAAGATGGAGGCGAACGATCCAGAGAA 12946 Query 36274 GAAAATTCCTTCTACTGCCGCAAAGGCAATAAGTCTCTC 36312 ||| || ||||| || || |||||||||| ||| | ||| Sbjct 12947 GAAGATACCTTCGACGGCGGCAAAGGCAACAAGACGCTC 12985 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 658156658312080