Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mortierella_20alpina_20[genbank_20GCA_5F001021685.1_202015-06-08] 1,962 sequences; 36,305,198 total letters Query= NC_003663.2 Length=224499 Score E Sequences producing significant alignments: (Bits) Value seq1939 221 2e-52 seq1263 140 5e-28 seq1142 87.8 3e-12 >seq1939 Length=69097 Score = 221 bits (244), Expect = 2e-52 Identities = 756/1160 (65%), Gaps = 30/1160 (3%) Strand=Plus/Plus Query 79429 ATAAACGCGTCTGCTAATCCTTGAACACCAATACCGATAGGTCTATGTCTCTTATTAGAA 79488 || || ||||| || |||||||||||||| | ||| || || | ||| | | | || || Sbjct 1780 ATGAATGCGTCAGCCAATCCTTGAACACCCACACCAATGGGGCGATGACGCATGTTGGAC 1839 Query 79489 ATTTCAGCTTCTGGAATAGGATAATAATTAATATCTATAATTTTATTGAGATTCCTGACT 79548 || || || |||| || || ||||| | ||| || || || || ||||| | | Sbjct 1840 CGCTCGGCCTCGGGAACCGGGTAGTAATTCACATCAATGATCTTGTTTAGATTGCGGGTG 1899 Query 79549 ATTACTTTGACCACATCCTTTAGTTTGAGAAAATCAAA-TCGTCCATCTATT-----ACA 79602 | || ||| || ||| | ||| | | || |||| || || | ||| Sbjct 1900 ACGACCTTGGTGAC---CTTGTG---GAGCATCTTGAAGTCGTACACCTGGTTGCTGACA 1953 Query 79603 AACATGTTCAACGCGACAGATGCCAGATTACAAACGGCTACCTCATTAGCATCCGCA-TA 79661 ||| || | |||||| |||| || || || || ||||| | | | | || || Sbjct 1954 AACGTGGGGAGAGCGACACTGGCCAAGTTGCACACAGCCACCTCGTCGGGA-CTGCTGTA 2012 Query 79662 TTGTATTATTTCAGTGCAGAGGTTACTACACTTAATGGTTCCTAAATTTTGTTGATTACT 79721 | | || || ||||| | ||| |||||||||||||| || ||||| || || Sbjct 2013 CTCGACAATCTCTGTGCACAAGTTGGAGCACTTAATGGTTCCCAAGTTTTGCTGGTTGGA 2072 Query 79722 CTTTTTGTTACACGCATCCTTATAAAGAATGAACGGAGTACCAGTTTCAATCTGAGATTC 79781 ||| ||| || |||||||| ||||| || | || || || || || | || | || Sbjct 2073 CTTGCGGTTGCAGGCATCCTTGTAAAGCATATAGGGCGTTCCCGTCTCGGTTTGCGCCTC 2132 Query 79782 TATAATCGCTTTCCAGACGACTCGAGCCTTTATTATAGACTTGTAT-CTCTTTTCTCTTT 79840 | |||||| | ||| | | ||||||| || || ||| | | ||| || Sbjct 2133 CAAAATCGCATACCACAACTTTTGAGCCTTGAT---AGTCTTTCGGGCGCGACCCTCCTT 2189 Query 79841 C--GTATTGTGTATATAATCGTTCGAACTCGTCTCCCCAAACATCGTCTAATCCAGGACA 79898 | ||| | || | || ||||| || ||||||||||| | | || || Sbjct 2190 CTCGTACCGGTGGTAGAGCTCCTCAAACTCCTCGCCCCAAACATCTTGAAGGCCGGGGGC 2249 Query 79899 TTCGTCAGGACACATCAACGACCACTCTCCATCATCCTTTACTCGTTTCATAAAGAGATC 79958 || |||| || | || ||| ||||||| || | | || ||||| || ||||| Sbjct 2250 CTCAGCAGGGCAGAACAGACTCCAGTCTCCATTTTCTTCAATGCGCTTCATGAACAGATC 2309 Query 79959 AGGAATCCAAAGAGCTATA-AATAGATCTCTGGTTCTATGCTCCTCGTTTCCTGTATTCT 80017 || ||||| || || ||| || ||||| | || | ||| || ||||| || |||| Sbjct 2310 GGGGATCCAGAGGGC-ATAGAACAGATCACGGGCACGGGACTCTTCCTTTCCAGTGTTCT 2368 Query 80018 TTTTAAGATCGAGGAACGCCATAATATCAGAATGCCACGGTTCCAAGTATATGGCCATAA 80077 | ||| || | ||| | | | || | ||||| || || | ||| ||||| | Sbjct 2369 TGCGAAGGTCCAAAAACTCAAAGACGTCTGCGTGCCAAGGCTCGAGGTACATGGCGAACG 2428 Query 80078 CTCCCGGTCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCA 80137 | || || || ||||| || |||||||| | || | || ||||| || || || | | Sbjct 2429 CACCTGGGCGCTTGTTGCCACCCTGATCGACATAACGGGCAGTGTTGTTGTACACGCGAA 2488 Query 80138 ACATTGGAATAATACCATTGGATGTA-CCATTGGTCCCGGAGATATAGCTTCCACTGGCA 80196 ||| ||||||| |||||||| ||| || ||||| || | || || ||| ||| Sbjct 2489 GCATAGGAATAAGGCCATTGGA-GTATCCGTTGGTTCCAGCAATGTATGATCCCGAGGCG 2547 Query 80197 CGAATATTACTAATTGATAGACCTATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGT 80256 ||||| || ||| ||||| ||||| || ||| | || ||||| | ||||| Sbjct 2548 CGAATGTTGTGAATGTTCAGACCGATTCCTCCAGCCGTCTTGGAGATCATGGCGCAGGTC 2607 Query 80257 TTTAACGTATCATAGATGCCCTCTATGCTATCATCAATCATGTTAAGTAGAAAACAGCTA 80316 || ||||| |||||||| ||||| || ||| || ||||| | || | || ||||| Sbjct 2608 TTCAACGTGTCATAGATACCCTCGATCGAATCGTCCTTCATGGTCAGCAAGAAGCAGCTC 2667 Query 80317 GACATTTGGTGACGACTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCAT 80376 ||||| ||| | | ||||| || ||||| | || || ||||| || || || | Sbjct 2668 GACATCTGGGGTCTGGGGGTTCCGGCGTTAAAGAGAGTGGGCGAAGCATGAGTGAAGAAC 2727 Query 80377 TTTTCAGACA-GTAGATTGTACGTCTCAATAGCTGATTCTATATCCCATTGA--TGAATT 80433 ||||| |||| |||| ||||| ||||| ||||| || | ||| || | || ||| Sbjct 2728 TTTTCCGACATGTAG-TTGTAGGTCTCGATAGCCTTCTCGACATC--ATCGCCGTGGATT 2784 Query 80434 CCTACCGCGACACGCATTAACATGTGCTGAGGTCTTTCAACGATCTTGTTATTTATTTTC 80493 || || | ||||||||| ||||| ||||||||||| || ||| |||| | || Sbjct 2785 CCGACAGAGACACGCATCAACATATGCTGAGGTCTCTCTGCGACCTTGCCGTCGATGCGG 2844 Query 80494 AACAAGTAAGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTATGAAAAGTCTCGTTCG 80553 | || ||| || ||||| || || || ||||| |||||||| ||||| || ||| Sbjct 2845 AGCAGGTACGAGCGCTCCAAGGTCTTGAATCCAAAGTAGTTGTAGTTGAAGTCGCGGTCG 2904 Query 80554 TAAATAATAACCGAGTTGAG 80573 || || || | ||||| || Sbjct 2905 TAGATGATGGCAGAGTTCAG 2924 >seq1263 Length=39644 Score = 140 bits (154), Expect = 5e-28 Identities = 159/213 (75%), Gaps = 3/213 (1%) Strand=Plus/Plus Query 49956 CAAACATGCGAAATCGCAGTGCAGACCCTCGTCTCTACTAATTAGTTCGTTGGAAAACGT 50015 ||| || || || ||| ||| ||||||||||| | | || || ||||| || || || Sbjct 12827 CAAGCAGGCAAAGTCGGTGTGGAGACCCTCGTCACGAGAGATGAGCTCGTTCGAGAAGGT 12886 Query 50016 GAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGACCCAGAAAA 50075 ||| |||||||| || |||||||| || ||||| || ||||| || || || ||||| || Sbjct 12887 GAGGCCGGGCATGAGACCACGCTTCTTGAGCCAGAAGATGGAGGCGAACGATCCAGAGAA 12946 Query 50076 GAAGATTCCTTCTACTGCGGCAAAGGCAACAAGTCTCTCTCCATAACTGGCGCTGTCAT- 50134 |||||| ||||| || ||||||||||||||||| | ||| || | | | | || ||| Sbjct 12947 GAAGATACCTTCGACGGCGGCAAAGGCAACAAGACGCTCAGCAAAGGTCGAGTTGGCATC 13006 Query 50135 --GTATCCACTTTTGAGCCCAATCGGCCTTCTT 50165 |||||||| | ||||| | |||||||| Sbjct 13007 CGAGATCCACTTCAGGGCCCAGGCAGCCTTCTT 13039 >seq1142 Length=49763 Score = 87.8 bits (96), Expect = 3e-12 Identities = 141/203 (69%), Gaps = 0/203 (0%) Strand=Plus/Minus Query 80263 GTATCATAGATGCCCTCTATGCTATCATCAATCATGTTAAGTAGAAAACAGCTAGACATT 80322 || || ||||| ||||| || ||||| || ||| | | || ||||| || ||||| Sbjct 35615 GTGTCGTAGATACCCTCGATACTATCGTCTTGCATCTGGACAAGGAAACAACTCGACATC 35556 Query 80323 TGGTGACGACTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCA 80382 ||| |||| |||||| ||||| || | || || | ||||||||| || | || ||| Sbjct 35555 TGGGGACGCGGAGTTCCAGCATTGAACAGTGTCGGGGTAGCGTGCGTGAAGTACTTCTCA 35496 Query 80383 GACAGTAGATTGTACGTCTCAATAGCTGATTCTATATCCCATTGATGAATTCCTACCGCG 80442 |||| | | ||| ||||||||||| | || || || | | || || || | || Sbjct 35495 GACATGAAGTGGTATGTCTCAATAGCAGCCTCAATGTCGCGTCCGTGGATGCCGATCGAA 35436 Query 80443 ACACGCATTAACATGTGCTGAGG 80465 || | ||| | ||| |||||||| Sbjct 35435 ACTCTCATAATCATATGCTGAGG 35413 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 718251184457680