Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mortierella_20alpina_20[genbank_20GCA_5F001021685.1_202015-06-08] 1,962 sequences; 36,305,198 total letters Query= NC_004105.1 Length=209771 Score E Sequences producing significant alignments: (Bits) Value seq1939 212 8e-50 seq1221 178 2e-39 seq1142 96.9 5e-15 >seq1939 Length=69097 Score = 212 bits (234), Expect = 8e-50 Identities = 439/646 (68%), Gaps = 8/646 (1%) Strand=Plus/Plus Query 72003 CCACTCTCCATCATCATTTACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATA-A 72061 ||| ||||||| || | | || ||||| || ||||| || ||||| || || ||| | Sbjct 2271 CCAGTCTCCATTTTCTTCAATGCGCTTCATGAACAGATCGGGGATCCAGAGGGC-ATAGA 2329 Query 72062 ATAGATCTCTGGTTCTATGCTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCA 72121 | ||||| | || | ||| || ||||| || ||||| ||| || | ||| | | Sbjct 2330 ACAGATCACGGGCACGGGACTCTTCCTTTCCAGTGTTCTTGCGAAGGTCCAAAAACTCAA 2389 Query 72122 TAATATCAGAATGCCACGGTTCCAAGTATATGGCCATAACTCCCGGCCGTTTGTTTCCTC 72181 | || | ||||| || || | ||| ||||| | | || || || ||||| || | Sbjct 2390 AGACGTCTGCGTGCCAAGGCTCGAGGTACATGGCGAACGCACCTGGGCGCTTGTTGCCAC 2449 Query 72182 CCTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCATTGG 72241 ||||||| | || | || ||||| || || || | | ||| ||||||| ||||||| Sbjct 2450 CCTGATCGACATAACGGGCAGTGTTGTTGTACACGCGAAGCATAGGAATAAGGCCATTGG 2509 Query 72242 ATGCACCATTGGTCCCGGAGATATAGCTTCCACTGGCACGAATATTGCTAATTGATAGAC 72301 | || ||||| || | || || ||| ||| ||||| ||| ||| |||| Sbjct 2510 AGTATCCGTTGGTTCCAGCAATGTATGATCCCGAGGCGCGAATGTTGTGAATGTTCAGAC 2569 Query 72302 CTATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTATCATAGATGCCCT 72361 | ||||| || ||| | || ||||| | ||||| || ||||| |||||||| |||| Sbjct 2570 CGATTCCTCCAGCCGTCTTGGAGATCATGGCGCAGGTCTTCAACGTGTCATAGATACCCT 2629 Query 72362 CTATACTATCATCCATCATGTTAAGTAGAAAACAGCTAGACATTTGGTGACGACTAGTTC 72421 | || ||| ||| ||||| | || | || ||||| ||||| ||| | | |||| Sbjct 2630 CGATCGAATCGTCCTTCATGGTCAGCAAGAAGCAGCTCGACATCTGGGGTCTGGGGGTTC 2689 Query 72422 CCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGACA-GTAGATTGTAC 72480 | || ||||| | || || ||||| || || || | ||||| |||| |||| ||||| Sbjct 2690 CGGCGTTAAAGAGAGTGGGCGAAGCATGAGTGAAGAACTTTTCCGACATGTAG-TTGTAG 2748 Query 72481 GTCTCAATAGCTGATTCTATATCCCATTGATGT--ATTCCTACCGCGACACGCATTAACA 72538 ||||| ||||| || | ||| || | || ||||| || | ||||||||| |||| Sbjct 2749 GTCTCGATAGCCTTCTCGACATC--ATCGCCGTGGATTCCGACAGAGACACGCATCAACA 2806 Query 72539 TATGCTGAGGTCTTTCAACGATCTTGTTATTTATTTTCAACAAGTAGGATTTTTCCAAAG 72598 ||||||||||||| || ||| |||| | || | || ||| || ||||| | Sbjct 2807 TATGCTGAGGTCTCTCTGCGACCTTGCCGTCGATGCGGAGCAGGTACGAGCGCTCCAAGG 2866 Query 72599 TTTTAAAACCAAAATAGTTGTATGAAAAGTCTCGTTCGTAAATAAT 72644 | || || ||||| |||||||| ||||| || ||||| || || Sbjct 2867 TCTTGAATCCAAAGTAGTTGTAGTTGAAGTCGCGGTCGTAGATGAT 2912 >seq1221 Length=39966 Score = 178 bits (196), Expect = 2e-39 Identities = 424/635 (67%), Gaps = 16/635 (3%) Strand=Plus/Minus Query 72030 CATAAAGAGATCAGGAATCCAAAGAGCTATAAATAGATCTCTGGTTCTATGCTCCTCGTT 72089 ||| || |||||||| ||||| || || | || ||||| | || | ||| || || Sbjct 34817 CATGAACAGATCAGGGATCCACAGCGCAAAGAACAGATCACGGGCGCGGGTCTCTTCCTT 34758 Query 72090 TCCTGTATTCTTTTTAAGATCGAGGAACGCCATAATATCAGAATGCCACGGTTCCAAGTA 72149 || || ||||| || || ||||| | | | ||| | ||||||||| || | ||| Sbjct 34757 GCCCGTGTTCTTGCGCAGGTCCAGGAAATCAAAGACATCGGCATGCCACGGCTCGAGGTA 34698 Query 72150 TATGGCCATAACTCCCGGCCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATT 72209 ||||| | | ||||| || ||||| || || ||||| | || | ||| ||||| || Sbjct 34697 CATGGCAAAGGCACCCGGTCGCTTGTTGCCACCTTGATCCACATACCGAGCCGTGTTGTT 34638 Query 72210 ATAAACTCTCAACATTGGAATAATACCATTGGATGCACCATTGGTCCCGGAGATATAGCT 72269 | || |||| ||| || || | |||||| || || || || |||| ||| ||| Sbjct 34637 GAAGACCCTCAGCATGGGGATCAGACCATTCGAGTAGCCGTTCGTGCCGGCGATGTAGGA 34578 Query 72270 TCCACTGGCACGAATATTGCTAATTGATAGACCTATTCCCCCTGCCATTTTAGAGATTAA 72329 ||| ||||| || ||| || ||||| || || || ||| | || ||||| | Sbjct 34577 TCCGGACGCACGGATGTTGTGGATGTTGAGACCAATGCCTCCGGCCGTCTTGGAGATCAT 34518 Query 72330 TGCGCATCGTTTTAACGTATCATAGATGCCCTCTATACTATCATCCATCATGTTAAGTAG 72389 || || || | ||||| ||||| ||||| || || ||| |||| | || || Sbjct 34517 GGCACAGGTCTTGAGGGTATCGTAGATCCCCTCGATCGAGTCGTCCTTCATAGTGAGGAG 34458 Query 72390 AAAACAGCTAGACATTTGGTGACGACTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGTG 72449 |||||||| |||||||| | || || || ||||| || | || || || || || Sbjct 34457 GAAACAGCTGGACATTTGTGGCCGGGGCGTGCCGGCATTGAACAGCGTCGGGGACGCATG 34398 Query 72450 CGTAAACCATTTTTCAGACA-GTAGATTGTACGTCTCAATAGCT-----GA--TTCTATA 72501 || || ||||||| |||| |||| ||||| ||||| || || || |||| | Sbjct 34397 GGTGAAGAATTTTTCGGACATGTAG-TTGTAGGTCTCGATGGCCTTGTCGACGTTCTG-A 34340 Query 72502 TCCCATTGATGTATTCCTACCGCGACACGCATTAACATATGCTGAGGTCTTTCAACGATC 72561 |||| |||| || || ||||| ||||| | || ||||||||||| || ||||| Sbjct 34339 CCCCA--GATG----CCGACGGCGACGCGCATCAGCAGATGCTGAGGTCGCTCTGCGATC 34286 Query 72562 TTGTTATTTATTTTCAACAAGTAGGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTAT 72621 ||| | || || | | |||||| || | || || || ||||| ||||||||| Sbjct 34285 TTGCCGTCGATCTTGAGGAGGTAGGAGCGCTCGAGGGTCTTGAAGCCAAAGTAGTTGTAT 34226 Query 72622 GAAAAGTCTCGTTCGTAAATAATAACCGAATTGAG 72656 ||||| || || || || || |||| || || Sbjct 34225 TGGAAGTCACGGTCATAGATGATGGCCGAGTTCAG 34191 >seq1142 Length=49763 Score = 96.9 bits (106), Expect = 5e-15 Identities = 143/203 (70%), Gaps = 0/203 (0%) Strand=Plus/Minus Query 72346 GTATCATAGATGCCCTCTATACTATCATCCATCATGTTAAGTAGAAAACAGCTAGACATT 72405 || || ||||| ||||| |||||||| || ||| | | || ||||| || ||||| Sbjct 35615 GTGTCGTAGATACCCTCGATACTATCGTCTTGCATCTGGACAAGGAAACAACTCGACATC 35556 Query 72406 TGGTGACGACTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCA 72465 ||| |||| |||||| ||||| || | || || | ||||||||| || | || ||| Sbjct 35555 TGGGGACGCGGAGTTCCAGCATTGAACAGTGTCGGGGTAGCGTGCGTGAAGTACTTCTCA 35496 Query 72466 GACAGTAGATTGTACGTCTCAATAGCTGATTCTATATCCCATTGATGTATTCCTACCGCG 72525 |||| | | ||| ||||||||||| | || || || | | || || || | || Sbjct 35495 GACATGAAGTGGTATGTCTCAATAGCAGCCTCAATGTCGCGTCCGTGGATGCCGATCGAA 35436 Query 72526 ACACGCATTAACATATGCTGAGG 72548 || | ||| | |||||||||||| Sbjct 35435 ACTCTCATAATCATATGCTGAGG 35413 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 671122740311120