Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mortierella_20alpina_20[genbank_20GCA_5F001021685.1_202015-06-08] 1,962 sequences; 36,305,198 total letters Query= NC_004156.2 Length=231621 Score E Sequences producing significant alignments: (Bits) Value seq1939 206 4e-48 seq1263 194 2e-44 seq1221 125 1e-23 >seq1939 Length=69097 Score = 206 bits (228), Expect = 4e-48 Identities = 396/576 (69%), Gaps = 6/576 (1%) Strand=Plus/Minus Query 96806 AACAAACGGCAACGCCAGTGGCCTAGTGCCAATGCTCAGAATGTACAATG-CAATGTCAC 96864 ||| ||||| || ||| |||||| | || ||||| | ||||||| || || | | Sbjct 2523 AACCAACGGATACTCCAATGGCCTTATTCCTATGCTTCGCGTGTACAACAACACTGCC-C 2465 Query 96865 GATACGTTACACAGGGCGGCAATAAACGGCCAGGCGCTATAGCCGTCTACTTGGAACCTT 96924 | || || ||||| ||||| || || ||||| || | ||| | ||| | || |||| Sbjct 2464 GTTATGTCGATCAGGGTGGCAACAAGCGCCCAGGTGCGTTCGCCATGTACCTCGAGCCTT 2405 Query 96925 GGCACGCGGACGTTTTTGACTTTATCGAGATGCGCAAAAACTCTGGCTTTGAAGAGGCAC 96984 ||||||| ||||| ||||| ||| | || | ||||| ||| |||| |||||| | | Sbjct 2404 GGCACGCAGACGTCTTTGAGTTTTTGGACCTTCGCAAGAACACTGGAAAGGAAGAGTCCC 2345 Query 96985 GAGCCAGGGACTTGTTTTATGCACTCTGGGTGCCAGATTTGTTCATGAAGCGCGTCAACG 97044 | ||| | || |||| ||||| |||||| | || ||| |||||||||||||| | | | Sbjct 2344 GTGCCCGTGATCTGTTCTATGCCCTCTGGATCCCCGATCTGTTCATGAAGCGCATTGAAG 2285 Query 97045 ACGGTGGCTACTGGAGCCTAATGTGCCCCGACTCGTCACCCGGTCTGTCCGATTGCTGGG 97104 | ||| ||||||| || | ||||| | | | ||||| || ||| |||| Sbjct 2284 AAAATGGAGACTGGAGTCTGTTCTGCCCTGCTGAGGCCCCCGGCCTTCAAGATGTTTGGG 2225 Query 97105 GCGAAGAGTTTGAGGCCAAGTA-CACGGCCTACGAGCAAGAGGGCCG-ATACGTGAGACG 97162 |||| |||||||||| || ||| | |||||| | ||||| || || |||| Sbjct 2224 GCGAGGAGTTTGAGGAGCTCTACCACCG-GTACGAGAAGGAGGGTCGCGCCCGAAAGACT 2166 Query 97163 AGTCGATGCACGAGAACTGTGGAAGGCCATCGTGACGGCTCAGGTAGAGACTGGAACTCC 97222 | || | || | | | ||||| | || || || ||| || ||||| ||||| || Sbjct 2165 A-TCAAGGCTCAAAAGTTGTGGTATGCGATTTTGGAGGCGCAAACCGAGACGGGAACGCC 2107 Query 97223 GTACATTCTCTACAAGGATACCGTGAATCGCAACAGCAACCAACGCCACTTGGGCACCAT 97282 || || || ||||||||| || || ||||| |||||| | ||||||| ||||| Sbjct 2106 CTATATGCTTTACAAGGATGCCTGCAACCGCAAGTCCAACCAGCAAAACTTGGGAACCAT 2047 Query 97283 CAAGGGCTCCAATCTGTGCACGGAAATTGTAGAGTACGCCTCTCCGGACGAGACGGCAGT 97342 ||| ||||||| ||||||| || ||||| |||||| | ||| |||||| ||| || Sbjct 2046 TAAGTGCTCCAACTTGTGCACAGAGATTGTCGAGTACAGCAGTCCCGACGAGGTGGCTGT 1987 Query 97343 TTGCGTTCTGGCATCGGTCAATCTGCCCAAGTTTGT 97378 ||| |||| ||| ||| |||| |||||| Sbjct 1986 GTGCAACTTGGCCAGTGTCGCTCTCCCCACGTTTGT 1951 >seq1263 Length=39644 Score = 194 bits (214), Expect = 2e-44 Identities = 228/306 (75%), Gaps = 2/306 (1%) Strand=Plus/Minus Query 124994 CCTGTTTCCCATCAGGTATCATGACATTTGGGAAATGTACAAAAAGGCTCAGGCCTCCTT 125053 ||| || ||||||| || || || | ||| | |||||||| |||||| |||||||||| Sbjct 13804 CCTCTTCCCCATCAAGTTCCACGAGGTCTGGCAGATGTACAAGAAGGCTGAGGCCTCCTT 13745 Query 125054 TTGGACGGTCGAAGAGGTCGATCTGTCCAAGGACCTGTACGATTGGGAGACTCGTTTGAC 125113 ||||| | |||||||||||||| ||||||||| || |||| ||||||| || || | Sbjct 13744 CTGGACTGCTGAAGAGGTCGATCTCTCCAAGGACATGCACGACTGGGAGAACCGCATGTC 13685 Query 125114 TGAAACTGAGCGAGAGTTTATATCGCACATTTTGGCCTTCTTTGCCGGCTCCGATGGAAT 125173 || |||||| ||| | |||||||| |||| ||||| || | | || || || Sbjct 13684 TGCCGACGAGCGATTCTTTGTCTCGCACATCCTGGCTTTCTTCGCTGCCAGTGACGGCAT 13625 Query 125174 CGTCAACGACAATCTG-TTGACACGATTCTCTCAAGAGTTGACCATTCCAGAGGTGTCGT 125232 |||||||| || || |||| |||||||| | ||| | || ||||||| | Sbjct 13624 TGTCAACGAGAACTTGCTTGAG-CGATTCTCGAACGAGGTCCAGATCCCAGAGGCAAGAT 13566 Query 125233 GCTTTTACGGATTCCAAATCATGATTGAGAACGTGCACTCGGAAATGTACTCTACACTGA 125292 |||||||||||||||| |||||||||||||| || ||||| || |||||||| ||| Sbjct 13565 GCTTTTACGGATTCCAGATCATGATTGAGAATGTCCACTCTGAGATGTACTCGCTCTTGA 13506 Query 125293 TTGACA 125298 |||||| Sbjct 13505 TTGACA 13500 Score = 152 bits (168), Expect = 8e-32 Identities = 295/432 (68%), Gaps = 15/432 (3%) Strand=Plus/Minus Query 125427 CTGGTGGCATTCGCCGCCGTAGAGGGCATCTTCTTTTCGGGTAGTTTTGCGGCCATCTTT 125486 || || || || |||||||| || || |||||||| || || || || ||||||| Sbjct 12979 CTTGTTGCCTTTGCCGCCGTCGAAGGTATCTTCTTCTCTGGATCGTTCGCCTCCATCTTC 12920 Query 125487 TGGCTCAAGAAGCGCGGACTCATGCCCGGACTGACGCACAGTAACGAGTTTATATCTCGA 125546 |||||||||||||| || ||||||||||| || || | |||||| | || ||||| Sbjct 12919 TGGCTCAAGAAGCGTGGTCTCATGCCCGGCCTCACCTTCTCGAACGAGCTCATCTCTCGT 12860 Query 125547 GACGAGGGCCTACACTGTGACTTTGCCATTCTACTGTT-TCG--CAACTATCTGCGTCCC 125603 |||||||| || ||| ||||||||| | || || ||| || | ||||| Sbjct 12859 GACGAGGGTCTCCACACCGACTTTGCCTGCTTGCTCTTCTCGCTCATGAAGAGCCGTCCT 12800 Query 125604 GAGTGCAGATCCAGCGATGAAAAGGTCATCAACATTGTAACCGATGCCGTGAGGATAGAA 125663 || |||| |||| ||| |||| | ||||| || || || || Sbjct 12799 GA--CCAGA---AGCG-------TGTCTGTGACATCATCACCGAGGCTGTCGCCATCGAG 12752 Query 125664 CAAGAGTTTCTAACCGAATCCCTACCGGTCAGCATGATTGGCATGAACTGCAAGCTAATG 125723 |||||||| || || || | || || |||| |||| ||||||||| |||||| ||| Sbjct 12751 CAAGAGTTCCTCACGGATGCTCTCCCCGTCATGCTGATCGGCATGAACGCCAAGCTCATG 12692 Query 125724 TGCGAGTACATAGAGTTTGTGGCAGATCGTCTACTGTACGAGTTGATTGGCCGCAAGATT 125783 ||||||| |||||||| || || ||||| || || | | || |||| | Sbjct 12691 AAGCAGTACATCGAGTTTGTTGCTGACCGTCTGCTCGTCGCTCTCGGTAACCCCAAGCAT 12632 Query 125784 TACAACGCCAAGAATCCCTTTGATTTCATGACCAGCATATCACTAGAGGGTAAGACCAAC 125843 ||||||| | |||| ||||| || || ||| | || ||||| |||| ||||||||| Sbjct 12631 TACAACGTCGAGAACCCCTTCGACTTTATGGACTTGATCTCACTCCAGGGCAAGACCAAC 12572 Query 125844 TTTTTCGAGAAG 125855 || || |||||| Sbjct 12571 TTCTTTGAGAAG 12560 >seq1221 Length=39966 Score = 125 bits (138), Expect = 1e-23 Identities = 301/449 (67%), Gaps = 10/449 (2%) Strand=Plus/Plus Query 96876 CAGGGCGGCAATAAACGGCCAGGCGCTATAGCCGTCTACTTGGAACCTTGGCACGCGGAC 96935 || || ||||| || || || || || | ||| | ||| | || || ||||| || || Sbjct 34662 CAAGGTGGCAACAAGCGACCGGGTGCCTTTGCCATGTACCTCGAGCCGTGGCATGCCGAT 34721 Query 96936 GTTTTTGACTTTATCGAGATGCGCAAAAACTCTGGCTTTGAAGAGGCACGAGCCAGGGAC 96995 || ||||| || | || ||||||| ||| | ||| |||||| | || ||| | || Sbjct 34722 GTCTTTGATTTCCTGGACCTGCGCAAGAACACGGGCAAGGAAGAGACCCGCGCCCGTGAT 34781 Query 96996 TTGTTTTATGCACTCTGGGTGCCAGATTTGTTCATGAAGCGCGTCAACGA---CGGTGGC 97052 |||| | ||| || ||| | || ||| |||||||| ||| || | || ||||| Sbjct 34782 CTGTTCTTTGCGCTGTGGATCCCTGATCTGTTCATGCGACGCATCGAAGAAAACGGTG-- 34839 Query 97053 TACTGGAGCCTAATGTGCCCCGACTCGTCACCCGGTCTGTCCGATTGCTGGGGCGAAGAG 97112 ||||| ||| | || || | | |||| || || || |||||| || || Sbjct 34840 -ACTGGTCCCTCTTCTGTCCTGCAGAGGCACCGGGCCTTCAAGACGTCTGGGGGGACCAG 34898 Query 97113 TTTGAGGCCAAGTAC-ACGGCCTACGAGCAAGAGGGCCGATA-CGTGAGACGAGTCGATG 97170 || |||| | ||| || | ||||| |||||||| ||| || |||||| || | | Sbjct 34899 TTCGAGGACCTCTACCACCGA-TACGAACAAGAGGGTCGAGCTCGAAAGACGA-TCAAGG 34956 Query 97171 CACGAGAACTGTGGAAGGCCATCGTGACGGCTCAGGTAGAGACTGGAACTCCGTACATTC 97230 | | | | |||||| || ||| | | | ||| ||||| || || || ||||| | Sbjct 34957 CCCAAAAGCTGTGGTTCGCGATCCTCGAGTCGCAGACCGAGACCGGGACCCCTTACATGC 35016 Query 97231 TCTACAAGGATACCGTGAATCGCAACAGCAACCAACGCCACTTGGGCACCATCAAGGGCT 97290 | |||||||| || ||||| || |||||| | | |||||||||||||| ||| Sbjct 35017 TTTACAAGGACGCCTGCAATCGTAAATCCAACCAGCAGAATCTGGGCACCATCAAGTGCT 35076 Query 97291 CCAATCTGTGCACGGAAATTGTAGAGTAC 97319 | || |||||||| || || | |||||| Sbjct 35077 CGAACCTGTGCACTGAGATCATCGAGTAC 35105 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 741041025523120