Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mortierella_20alpina_20[genbank_20GCA_5F001021685.1_202015-06-08] 1,962 sequences; 36,305,198 total letters Query= NC_005309.1 Length=359853 Score E Sequences producing significant alignments: (Bits) Value seq1899 107 4e-18 seq1237 107 4e-18 >seq1899 Length=11869 Score = 107 bits (118), Expect = 4e-18 Identities = 144/198 (73%), Gaps = 2/198 (1%) Strand=Plus/Plus Query 104363 GTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGTTTTCCA 104422 || || || ||||| || || || ||||| || || | ||||| || || || || || Sbjct 5517 GTCGACTCCTTCTGGATGTTGTAATCAGAGAGGGTACGGCCGTCCTCGAGCTGCTTGCCG 5576 Query 104423 GCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATCTT-TGCTTT 104481 ||||| || || | ||| || || || || || || || || ||||||||||| ||| || Sbjct 5577 GCAAAGATGAGACGCTGCTGGTCTGGGGGGATGCCCTCCTTGTCCTGAATCTTCTGC-TT 5635 Query 104482 TACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGTCTTACCAGTAAGTGT 104541 || || || | ||||||| | || ||||| || || || ||||||||||| || || Sbjct 5636 GACGTTATCGATGGTATCGGACGACTCGACCTCGAGGGTGATGGTCTTACCAGTCAGGGT 5695 Query 104542 TTTTACAAATATCTGCAT 104559 || || || |||||||| Sbjct 5696 CTTGACGAAAATCTGCAT 5713 >seq1237 Length=85294 Score = 107 bits (118), Expect = 4e-18 Identities = 144/198 (73%), Gaps = 2/198 (1%) Strand=Plus/Plus Query 104363 GTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGTTTTCCA 104422 || || || ||||||||||| |||||||| || || | ||||| || || || || || Sbjct 36050 GTCGACTCCTTCTGAATATTGTAGTCAGAGAGGGTACGGCCGTCCTCGAGCTGCTTGCCG 36109 Query 104423 GCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATCTT-TGCTTT 104481 || || || || | ||| || || ||||| || || || || || |||||||| ||| || Sbjct 36110 GCGAAGATGAGACGCTGCTGGTCTGGAGGGATACCCTCCTTGTCTTGAATCTTCTGC-TT 36168 Query 104482 TACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGTCTTACCAGTAAGTGT 104541 || || || | ||| || || || ||||| || || || ||||| || ||||| || Sbjct 36169 GACGTTGTCAATGGTGTCCGAAGACTCGACCTCGAGGGTGATGGTCTTGCCGGTAAGGGT 36228 Query 104542 TTTTACAAATATCTGCAT 104559 || || || |||||||| Sbjct 36229 CTTGACGAAAATCTGCAT 36246 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1151369456003096