Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mortierella_20alpina_20[genbank_20GCA_5F001021685.1_202015-06-08] 1,962 sequences; 36,305,198 total letters Query= NC_005839.2 Length=131680 Score E Sequences producing significant alignments: (Bits) Value seq1899 107 2e-18 seq1237 102 7e-17 >seq1899 Length=11869 Score = 107 bits (118), Expect = 2e-18 Identities = 149/209 (71%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 48518 ACTAAATGAAGTGTGCTCTCCTTTTGAATGTTGTAATCAGCCAATTGTCGCTCGTCCTCC 48577 || ||||| || || |||||| || ||||||||||||| | || ||||||| Sbjct 5505 ACCAAATGGAGGGTCGACTCCTTCTGGATGTTGTAATCAGAGAGGGTACGGCCGTCCTCG 5564 Query 48578 AGCTGCTTACCGCCGTAAATTAAACGCTGCTGATCCACCGGCACACTTTCCTTGTCCATA 48637 |||||||| ||| | | || | ||||||||| || || | | ||||||||| | Sbjct 5565 AGCTGCTTGCCGGCAAAGATGAGACGCTGCTGGTCTGGGGGGATGCCCTCCTTGTCCTGA 5624 Query 48638 ATTTTCTGCTTGATAGACGCTATGGTATCGGTAGACTCCGTCTCGACTGTTATGGTTTTA 48697 || |||||||||| | |||||||||| ||||| ||||| || ||||| ||| Sbjct 5625 ATCTTCTGCTTGACGTTATCGATGGTATCGGACGACTCGACCTCGAGGGTGATGGTCTTA 5684 Query 48698 CCGGTGAGAGTTTTCACAAAAATCTGCAT 48726 || || || || || || ||||||||||| Sbjct 5685 CCAGTCAGGGTCTTGACGAAAATCTGCAT 5713 >seq1237 Length=85294 Score = 102 bits (112), Expect = 7e-17 Identities = 148/209 (71%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 48518 ACTAAATGAAGTGTGCTCTCCTTTTGAATGTTGTAATCAGCCAATTGTCGCTCGTCCTCC 48577 || || ||||| || |||||| ||||| ||||| |||| | || ||||||| Sbjct 36038 ACCAAGTGAAGGGTCGACTCCTTCTGAATATTGTAGTCAGAGAGGGTACGGCCGTCCTCG 36097 Query 48578 AGCTGCTTACCGCCGTAAATTAAACGCTGCTGATCCACCGGCACACTTTCCTTGTCCATA 48637 |||||||| ||| || | || | ||||||||| || || | || |||||||| | Sbjct 36098 AGCTGCTTGCCGGCGAAGATGAGACGCTGCTGGTCTGGAGGGATACCCTCCTTGTCTTGA 36157 Query 48638 ATTTTCTGCTTGATAGACGCTATGGTATCGGTAGACTCCGTCTCGACTGTTATGGTTTTA 48697 || |||||||||| | ||||| || | |||||| ||||| || ||||| || Sbjct 36158 ATCTTCTGCTTGACGTTGTCAATGGTGTCCGAAGACTCGACCTCGAGGGTGATGGTCTTG 36217 Query 48698 CCGGTGAGAGTTTTCACAAAAATCTGCAT 48726 ||||| || || || || ||||||||||| Sbjct 36218 CCGGTAAGGGTCTTGACGAAAATCTGCAT 36246 Score = 84.2 bits (92), Expect = 2e-11 Identities = 144/209 (69%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 48518 ACTAAATGAAGTGTGCTCTCCTTTTGAATGTTGTAATCAGCCAATTGTCGCTCGTCCTCC 48577 || || ||||| || |||||| || || ||||| |||| | || ||||||| Sbjct 35503 ACCAAGTGAAGGGTCGACTCCTTCTGGATATTGTAGTCAGAGAGGGTACGGCCGTCCTCG 35562 Query 48578 AGCTGCTTACCGCCGTAAATTAAACGCTGCTGATCCACCGGCACACTTTCCTTGTCCATA 48637 |||||||| ||| | | || | ||||||||| || || | | |||||||| Sbjct 35563 AGCTGCTTGCCGGCAAAGATGAGACGCTGCTGGTCTGGGGGAATGCCCTCCTTGTCTTGG 35622 Query 48638 ATTTTCTGCTTGATAGACGCTATGGTATCGGTAGACTCCGTCTCGACTGTTATGGTTTTA 48697 || |||||||||| | | ||||| || | ||||||| ||| | || ||||| || Sbjct 35623 ATCTTCTGCTTGACATTGTCAATGGTGTCCGAAGACTCCACCTCCAACGTGATGGTCTTG 35682 Query 48698 CCGGTGAGAGTTTTCACAAAAATCTGCAT 48726 ||||| | || || || ||||||||||| Sbjct 35683 CCGGTCAAGGTCTTGACGAAAATCTGCAT 35711 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 421241127093962