Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mortierella_20alpina_20[genbank_20GCA_5F001021685.1_202015-06-08] 1,962 sequences; 36,305,198 total letters Query= NC_006998.1 Length=194711 Score E Sequences producing significant alignments: (Bits) Value seq1939 203 4e-47 seq1263 134 2e-26 seq1142 87.8 2e-12 >seq1939 Length=69097 Score = 203 bits (224), Expect = 4e-47 Identities = 484/719 (67%), Gaps = 12/719 (2%) Strand=Plus/Plus Query 63138 TCGAACTCGTCTCCCCAAACATTGTCCAATCCAGGACATTCATCCGGACACATCAACGAC 63197 || ||||| || |||||||||| | | || || ||| | || || | || | Sbjct 2212 TCAAACTCCTCGCCCCAAACATCTTGAAGGCCGGGGGCCTCAGCAGGGCAGAACAGACTC 2271 Query 63198 CACTCTCCGTCATCCTTCACT-CGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATA-A 63255 || ||||| | || |||| | || ||||| || ||||| || ||||| || || ||| | Sbjct 2272 CAGTCTCCATTTTC-TTCAATGCGCTTCATGAACAGATCGGGGATCCAGAGGGC-ATAGA 2329 Query 63256 ATAGATCTCTGGTTCTATGTTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCA 63315 | ||||| | || | || || ||||| || ||||| ||| || | ||| | | Sbjct 2330 ACAGATCACGGGCACGGGACTCTTCCTTTCCAGTGTTCTTGCGAAGGTCCAAAAACTCAA 2389 Query 63316 TAATATCAGAATGCCACGGTTCCAAGTATATGGCCATAACTCCAGGCCGTTTGTTTCCTC 63375 | || | ||||| || || | ||| ||||| | | || || || ||||| || | Sbjct 2390 AGACGTCTGCGTGCCAAGGCTCGAGGTACATGGCGAACGCACCTGGGCGCTTGTTGCCAC 2449 Query 63376 CCTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCGTTTG 63435 ||||||| | || | || ||||| || || || | | ||| ||||||| || || | Sbjct 2450 CCTGATCGACATAACGGGCAGTGTTGTTGTACACGCGAAGCATAGGAATAAGGCCATTGG 2509 Query 63436 A-TATACCATTGGTACCGGAGATATAGCTTCCACTGGCACGAATATTACTAATTGATAGA 63494 | ||| || ||||| || | || || ||| ||| ||||| || ||| ||| Sbjct 2510 AGTAT-CCGTTGGTTCCAGCAATGTATGATCCCGAGGCGCGAATGTTGTGAATGTTCAGA 2568 Query 63495 CCTATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTGTCATAGATACCC 63554 || ||||| || ||| | || ||||| | ||||| || |||||||||||||||||| Sbjct 2569 CCGATTCCTCCAGCCGTCTTGGAGATCATGGCGCAGGTCTTCAACGTGTCATAGATACCC 2628 Query 63555 TCTATGCTATCATCGATCATGTTAAGTAGAAAACAGCTAGACATTTGGTGACGACTAGTT 63614 || || ||| || ||||| | || | || ||||| ||||| ||| | | ||| Sbjct 2629 TCGATCGAATCGTCCTTCATGGTCAGCAAGAAGCAGCTCGACATCTGGGGTCTGGGGGTT 2688 Query 63615 CCCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGA-AAGTAGATTGTA 63673 || || ||||| | || || ||||| || || || | ||||| || | |||| ||||| Sbjct 2689 CCGGCGTTAAAGAGAGTGGGCGAAGCATGAGTGAAGAACTTTTCCGACATGTAG-TTGTA 2747 Query 63674 CGTCTCAATAGCTGAGTCTATATCCCATTG--ATGAATTCCTACTGCGACACGCATTAAC 63731 ||||| ||||| || | || ||| | || ||||| || | ||||||||| ||| Sbjct 2748 GGTCTCGATAGCCTTCTCGACAT--CATCGCCGTGGATTCCGACAGAGACACGCATCAAC 2805 Query 63732 ATGTGCTGAGGTCTTTCAACGATCTTGTTGTTTATTTTCAACAAGTAGGATTTTTCCAAA 63791 || ||||||||||| || ||| |||| || || | || ||| || ||||| Sbjct 2806 ATATGCTGAGGTCTCTCTGCGACCTTGCCGTCGATGCGGAGCAGGTACGAGCGCTCCAAG 2865 Query 63792 GTTTTAAAACCAAAATAGTTGTATGAAAAGTCTCGTTCGTAAATAATAACCGAGTTGAG 63850 || || || ||||| |||||||| ||||| || ||||| || || | ||||| || Sbjct 2866 GTCTTGAATCCAAAGTAGTTGTAGTTGAAGTCGCGGTCGTAGATGATGGCAGAGTTCAG 2924 >seq1263 Length=39644 Score = 134 bits (148), Expect = 2e-26 Identities = 158/213 (74%), Gaps = 3/213 (1%) Strand=Plus/Plus Query 33300 CAAACATGCGAAATCGCAGTGCAGACCCTCGTCTCTACTAATTAGTTCGTTGGAAAACGT 33359 ||| || || || ||| ||| ||||||||||| | | || || ||||| || || || Sbjct 12827 CAAGCAGGCAAAGTCGGTGTGGAGACCCTCGTCACGAGAGATGAGCTCGTTCGAGAAGGT 12886 Query 33360 GAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGAAGCGAATGATCCAGAAAA 33419 ||| |||||||| || |||||||| || ||||| || ||||| ||||| |||||||| || Sbjct 12887 GAGGCCGGGCATGAGACCACGCTTCTTGAGCCAGAAGATGGAGGCGAACGATCCAGAGAA 12946 Query 33420 GAAGATTCCTTCTACTGCAGCAAAGGCAATAAGTCTCTCTCCATAACCGGCGCTGTCAT- 33478 |||||| ||||| || || |||||||||| ||| | ||| || | | | || ||| Sbjct 12947 GAAGATACCTTCGACGGCGGCAAAGGCAACAAGACGCTCAGCAAAGGTCGAGTTGGCATC 13006 Query 33479 --GTATCCACTTTTGAGCCCAATCGGCCTTCTT 33509 |||||||| | ||||| | |||||||| Sbjct 13007 CGAGATCCACTTCAGGGCCCAGGCAGCCTTCTT 13039 >seq1142 Length=49763 Score = 87.8 bits (96), Expect = 2e-12 Identities = 141/203 (69%), Gaps = 0/203 (0%) Strand=Plus/Minus Query 63540 GTGTCATAGATACCCTCTATGCTATCATCGATCATGTTAAGTAGAAAACAGCTAGACATT 63599 ||||| ||||||||||| || ||||| || ||| | | || ||||| || ||||| Sbjct 35615 GTGTCGTAGATACCCTCGATACTATCGTCTTGCATCTGGACAAGGAAACAACTCGACATC 35556 Query 63600 TGGTGACGACTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCA 63659 ||| |||| |||||| ||||| || | || || | ||||||||| || | || ||| Sbjct 35555 TGGGGACGCGGAGTTCCAGCATTGAACAGTGTCGGGGTAGCGTGCGTGAAGTACTTCTCA 35496 Query 63660 GAAAGTAGATTGTACGTCTCAATAGCTGAGTCTATATCCCATTGATGAATTCCTACTGCG 63719 || | | | ||| ||||||||||| | || || || | | || || || | | Sbjct 35495 GACATGAAGTGGTATGTCTCAATAGCAGCCTCAATGTCGCGTCCGTGGATGCCGATCGAA 35436 Query 63720 ACACGCATTAACATGTGCTGAGG 63742 || | ||| | ||| |||||||| Sbjct 35435 ACTCTCATAATCATATGCTGAGG 35413 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 622931922219920