Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mortierella_20alpina_20[genbank_20GCA_5F001021685.1_202015-06-08] 1,962 sequences; 36,305,198 total letters Query= NC_008035.3 Length=126629 Score E Sequences producing significant alignments: (Bits) Value seq1899 98.7 8e-16 seq1237 98.7 8e-16 >seq1899 Length=11869 Score = 98.7 bits (108), Expect = 8e-16 Identities = 149/212 (70%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 16724 AGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCCATGGTTTTGGCGTCC 16783 || |||| ||| || || |||||||| || |||||||| || | | ||| | ||||| Sbjct 5502 AGGACCAAATGGAGGGTCGACTCCTTCTGGATGTTGTAATCAGAGAGGGTACGGCCGTCC 5561 Query 16784 TCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGCACGCCCTCTTTGTCG 16843 || | || ||||| ||| | || || ||||| ||||| || | |||||| ||||| Sbjct 5562 TCGAGCTGCTTGCCGGCAAAGATGAGACGCTGCTGGTCTGGGGGGATGCCCTCCTTGTCC 5621 Query 16844 GCAATTTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCGTTTCCACGGTGATGGTT 16903 ||| | |||||| || | | | || ||| | ||| || | ||||||||| Sbjct 5622 TGAATCTTCTGCTTGACGTTATCGATGGTATCGGACGACTCGACCTCGAGGGTGATGGTC 5681 Query 16904 TTTCCGGTCAGCGTTTTGACAAAAATCTGCAT 16935 || || ||||| || ||||| ||||||||||| Sbjct 5682 TTACCAGTCAGGGTCTTGACGAAAATCTGCAT 5713 >seq1237 Length=85294 Score = 98.7 bits (108), Expect = 8e-16 Identities = 149/212 (70%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 16724 AGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCCATGGTTTTGGCGTCC 16783 || |||| || || || |||||||| || || |||||||| | | ||| | ||||| Sbjct 35500 AGGACCAAGTGAAGGGTCGACTCCTTCTGGATATTGTAGTCAGAGAGGGTACGGCCGTCC 35559 Query 16784 TCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGCACGCCCTCTTTGTCG 16843 || | || ||||| ||| | || || ||||| ||||| || | |||||| ||||| Sbjct 35560 TCGAGCTGCTTGCCGGCAAAGATGAGACGCTGCTGGTCTGGGGGAATGCCCTCCTTGTCT 35619 Query 16844 GCAATTTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCGTTTCCACGGTGATGGTT 16903 || | |||||| || | | | | ||||| | |||| |||| |||||||| Sbjct 35620 TGGATCTTCTGCTTGACATTGTCAATGGTGTCCGAAGACTCCACCTCCAACGTGATGGTC 35679 Query 16904 TTTCCGGTCAGCGTTTTGACAAAAATCTGCAT 16935 || ||||||| || ||||| ||||||||||| Sbjct 35680 TTGCCGGTCAAGGTCTTGACGAAAATCTGCAT 35711 Score = 95.1 bits (104), Expect = 1e-14 Identities = 148/212 (70%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 16724 AGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCCATGGTTTTGGCGTCC 16783 || |||| || || || |||||||| || || |||||||| | | ||| | ||||| Sbjct 36035 AGGACCAAGTGAAGGGTCGACTCCTTCTGAATATTGTAGTCAGAGAGGGTACGGCCGTCC 36094 Query 16784 TCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGCACGCCCTCTTTGTCG 16843 || | || ||||| || | || || ||||| ||||| ||| | ||||| ||||| Sbjct 36095 TCGAGCTGCTTGCCGGCGAAGATGAGACGCTGCTGGTCTGGAGGGATACCCTCCTTGTCT 36154 Query 16844 GCAATTTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCGTTTCCACGGTGATGGTT 16903 ||| | |||||| || | | | | ||||| | ||| || | ||||||||| Sbjct 36155 TGAATCTTCTGCTTGACGTTGTCAATGGTGTCCGAAGACTCGACCTCGAGGGTGATGGTC 36214 Query 16904 TTTCCGGTCAGCGTTTTGACAAAAATCTGCAT 16935 || ||||| || || ||||| ||||||||||| Sbjct 36215 TTGCCGGTAAGGGTCTTGACGAAAATCTGCAT 36246 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 405078313586380