Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mortierella_20alpina_20[genbank_20GCA_5F001021685.1_202015-06-08] 1,962 sequences; 36,305,198 total letters Query= NC_008291.1 Length=198050 Score E Sequences producing significant alignments: (Bits) Value seq1939 219 5e-52 seq1263 122 1e-22 >seq1939 Length=69097 Score = 219 bits (242), Expect = 5e-52 Identities = 605/913 (66%), Gaps = 16/913 (2%) Strand=Plus/Plus Query 62801 ATCTCAGTGCAAAGATTACTACACTTGATGGTTCCTAAATTTTGTTGATTACTCTTTTTG 62860 ||||| ||||| | || ||||| |||||||| || ||||| || || ||| | Sbjct 2020 ATCTCTGTGCACAAGTTGGAGCACTTAATGGTTCCCAAGTTTTGCTGGTTGGACTTGCGG 2079 Query 62861 TTACACGCATCCTTATAAAGAATGAATGGAGTACCAGTTTCAATCTGAGATTCTATAATC 62920 || || |||||||| ||||| || | || || || || || | || | || | |||| Sbjct 2080 TTGCAGGCATCCTTGTAAAGCATATAGGGCGTTCCCGTCTCGGTTTGCGCCTCCAAAATC 2139 Query 62921 GCTTTCCAGACGACTCGAGCCTTTATTATAGATTTGTATCTCTTTTCTCTTTC--GTATA 62978 || | ||| | | ||||||| || | ||| | | ||| ||| ||| Sbjct 2140 GCATACCACAACTTTTGAGCCTTGATAGTC--TTTCGGGCGCGACCCTCCTTCTCGTACC 2197 Query 62979 GTGTATACAATCGTTCGAACTCGTCTCCCCAAACATTGTCCAGTCCAGGACATTCATCCG 63038 | || | || ||||| || |||||||||| | || || || ||| | | Sbjct 2198 GGTGGTAGAGCTCCTCAAACTCCTCGCCCCAAACATCTTGAAGGCCGGGGGCCTCAGCAG 2257 Query 63039 GACACATCAACGACCACTCTCCGTCATCCTTCACT-CGTTTCATAAAGAGATCAGGAATC 63097 | || | || ||| ||||| | || |||| | || ||||| || ||||| || ||| Sbjct 2258 GGCAGAACAGACTCCAGTCTCCATTTTC-TTCAATGCGCTTCATGAACAGATCGGGGATC 2316 Query 63098 CAAAGAGCTATA-AATAGATCTCTGGTTCTATGTTCCTCGTTTCCTGTATTCTTTTTAAG 63156 || || || ||| || ||||| | || | || || ||||| || ||||| ||| Sbjct 2317 CAGAGGGC-ATAGAACAGATCACGGGCACGGGACTCTTCCTTTCCAGTGTTCTTGCGAAG 2375 Query 63157 ATCGAGGAACGCCATAATATCAGAATGCCACGGTTCCAAGTATATGGCCATAACTCCAGG 63216 || | ||| | | | || | ||||| || || | ||| ||||| | | || || Sbjct 2376 GTCCAAAAACTCAAAGACGTCTGCGTGCCAAGGCTCGAGGTACATGGCGAACGCACCTGG 2435 Query 63217 CCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGG 63276 || ||||| || |||||||| | || | || ||||| || || || | | ||| || Sbjct 2436 GCGCTTGTTGCCACCCTGATCGACATAACGGGCAGTGTTGTTGTACACGCGAAGCATAGG 2495 Query 63277 AATAATACCATTGGATGTA-CCATTGGTCCCTGAGATATAGCTTCCACTGGCACGAATAT 63335 ||||| |||||||| ||| || ||||| || | || || ||| ||| ||||| | Sbjct 2496 AATAAGGCCATTGGA-GTATCCGTTGGTTCCAGCAATGTATGATCCCGAGGCGCGAATGT 2554 Query 63336 TACTAATTGATAGACCTATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACG 63395 | ||| ||||| ||||| || ||| | || ||||| | ||||| || |||| Sbjct 2555 TGTGAATGTTCAGACCGATTCCTCCAGCCGTCTTGGAGATCATGGCGCAGGTCTTCAACG 2614 Query 63396 TATCATAGATGCCCTCTATACTATCATCCATCATGTTAAGTAGAAAACAGCTAGACATTT 63455 | |||||||| ||||| || ||| ||| ||||| | || | || ||||| ||||| | Sbjct 2615 TGTCATAGATACCCTCGATCGAATCGTCCTTCATGGTCAGCAAGAAGCAGCTCGACATCT 2674 Query 63456 GGTGACGACTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGAGTAAACCATTTTTCAG 63515 || | | ||||| || ||||| | || || ||||| ||||| || | ||||| | Sbjct 2675 GGGGTCTGGGGGTTCCGGCGTTAAAGAGAGTGGGCGAAGCATGAGTGAAGAACTTTTCCG 2734 Query 63516 AAA-GTAGATTGTACGTCTCAATAGCTGAGTCTATATCCCATTGA--TGAATTCCTACTG 63572 | | |||| ||||| ||||| ||||| || | ||| || | || ||||| || | Sbjct 2735 ACATGTAG-TTGTAGGTCTCGATAGCCTTCTCGACATC--ATCGCCGTGGATTCCGACAG 2791 Query 63573 CGACACGCATTAACATGTGCTGAGGTCTTTCAACGATCTTGTTGTTTATTTTCAACAAGT 63632 ||||||||| ||||| ||||||||||| || ||| |||| || || | || || Sbjct 2792 AGACACGCATCAACATATGCTGAGGTCTCTCTGCGACCTTGCCGTCGATGCGGAGCAGGT 2851 Query 63633 AGGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTATGAAAAGTCTCGTTCGTAAATAA 63692 | || ||||| || || || ||||| |||||||| ||||| || ||||| || | Sbjct 2852 ACGAGCGCTCCAAGGTCTTGAATCCAAAGTAGTTGTAGTTGAAGTCGCGGTCGTAGATGA 2911 Query 63693 TAACCGAGTTGAG 63705 | | ||||| || Sbjct 2912 TGGCAGAGTTCAG 2924 >seq1263 Length=39644 Score = 122 bits (134), Expect = 1e-22 Identities = 155/213 (73%), Gaps = 3/213 (1%) Strand=Plus/Plus Query 32657 CAAACATGCGAAATCGCAGTGTAGACCCTCGTCTCTACTAATTAATTCGTTGGAAAACGT 32716 ||| || || || ||| ||| ||||||||||| | | || | ||||| || || || Sbjct 12827 CAAGCAGGCAAAGTCGGTGTGGAGACCCTCGTCACGAGAGATGAGCTCGTTCGAGAAGGT 12886 Query 32717 GAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGATCCAGAAAA 32776 ||| |||||||| || |||||||| || ||||| || ||||| || || |||||||| || Sbjct 12887 GAGGCCGGGCATGAGACCACGCTTCTTGAGCCAGAAGATGGAGGCGAACGATCCAGAGAA 12946 Query 32777 GAAAATTCCTTCTACTGCCGCAAAGGCAATAAGTCTCTCTCCATAACCGGCGCTGTCAT- 32835 ||| || ||||| || || |||||||||| ||| | ||| || | | | || ||| Sbjct 12947 GAAGATACCTTCGACGGCGGCAAAGGCAACAAGACGCTCAGCAAAGGTCGAGTTGGCATC 13006 Query 32836 --GTATCCACTTTTGAGCCCAATCGGCCTTCTT 32866 |||||||| | ||||| | |||||||| Sbjct 13007 CGAGATCCACTTCAGGGCCCAGGCAGCCTTCTT 13039 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 633616460175200