Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mortierella_20alpina_20[genbank_20GCA_5F001021685.1_202015-06-08] 1,962 sequences; 36,305,198 total letters Query= NC_008293.1 Length=135454 Score E Sequences producing significant alignments: (Bits) Value seq1237 102 7e-17 seq1899 98.7 9e-16 >seq1237 Length=85294 Score = 102 bits (112), Expect = 7e-17 Identities = 152/214 (71%), Gaps = 4/214 (2%) Strand=Plus/Minus Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058 ||||| || || || ||||| |||||||| || ||||||| | || |||||||| || Sbjct 35711 ATGCAGATTTTCGTCAAGACCTTGACCGGCAAGACCATCACGTTGGAGGTGGAGTCTTCG 35652 Query 25059 GACACTATCGAGTCACTG--AAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACC 25116 ||||| || || || || ||||| || ||| ||||| || || ||||| || |||| Sbjct 35651 GACACCATTGA--CAATGTCAAGCAGAAGATCCAAGACAAGGAGGGCATTCCCCCAGACC 35594 Query 25117 AACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACA 25176 | ||||| | || ||||||||||| || | || || | || || | || |||| Sbjct 35593 AGCAGCGTCTCATCTTTGCCGGCAAGCAGCTCGAGGACGGCCGTACCCTCTCTGACTACA 35534 Query 25177 ATATTCAAAAAGAATCCACGCTACATTTAGTGCT 25210 |||| || || || || || || || || || || Sbjct 35533 ATATCCAGAAGGAGTCGACCCTTCACTTGGTCCT 35500 >seq1899 Length=11869 Score = 98.7 bits (108), Expect = 9e-16 Identities = 151/213 (71%), Gaps = 2/213 (1%) Strand=Plus/Minus Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058 ||||| || || || ||||| |||| ||||| ||||||| |||| || |||||||| Sbjct 5713 ATGCAGATTTTCGTCAAGACCCTGACTGGTAAGACCATCACCCTCGAGGTCGAGTCGTCC 5654 Query 25059 GACACTATCGAGTCAC-TGAAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCA 25117 || || ||||| | || | ||||| || || ||||| || || || || || ||||| Sbjct 5653 GATACCATCGA-TAACGTCAAGCAGAAGATTCAGGACAAGGAGGGCATCCCCCCAGACCA 5595 Query 25118 ACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAA 25177 ||||| | || ||||||||||| || | || || | || || | |||||||| Sbjct 5594 GCAGCGTCTCATCTTTGCCGGCAAGCAGCTCGAGGACGGCCGTACCCTCTCTGATTACAA 5535 Query 25178 TATTCAAAAAGAATCCACGCTACATTTAGTGCT 25210 || || || || || || || ||||| || || Sbjct 5534 CATCCAGAAGGAGTCGACCCTCCATTTGGTCCT 5502 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 433317638315030