Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mortierella_20alpina_20[genbank_20GCA_5F001021685.1_202015-06-08] 1,962 sequences; 36,305,198 total letters Query= NC_008518.1 Length=174059 Score E Sequences producing significant alignments: (Bits) Value seq1263 113 5e-20 >seq1263 Length=39644 Score = 113 bits (124), Expect = 5e-20 Identities = 223/328 (68%), Gaps = 3/328 (1%) Strand=Plus/Plus Query 93364 GTATGTATCGATTAACAGAGAATACATTTCAGAATGGACATTCTCCATTGCAATTTGGAA 93423 |||||| || || || || || ||||| ||||| ||||||||||| || || ||||| Sbjct 13495 GTATGTGTCAATCAAGAGCGAGTACATCTCAGAGTGGACATTCTCAATCATGATCTGGAA 13554 Query 93424 TCCGTAGAAACATCTAGCTTCCGTGATCTGCACTTCTTGAGAAAATCTCTCTACGAGATT 93483 |||||| || ||||| || || | |||||| || || | || |||| ||| | | || Sbjct 13555 TCCGTAAAAGCATCTTGCCTCTGGGATCTGGACCTCGTTCGAGAATCGCTCAAGCAAGTT 13614 Query 93484 TTCATTGACTATACCATCGGATGCTGCaaaaaaaGCCAATATATGCTTTATAA--AAT-G 93540 || ||||| || || || || || || ||||||| || ||| | || ||| | Sbjct 13615 CTCGTTGACAATGCCGTCACTGGCAGCGAAGAAAGCCAGGATGTGCGAGACAAAGAATCG 13674 Query 93541 TTTCTCATCATCTTTAAGCTTATCCCAATCGGATAGATCTTTTGAAAGATCGACTTCTTC 93600 | || || | | || ||||| ||| | || || || |||||||| ||||| Sbjct 13675 CTCGTCGGCAGACATGCGGTTCTCCCAGTCGTGCATGTCCTTGGAGAGATCGACCTCTTC 13734 Query 93601 GACAGTCCAAAACGATGCTTCTGCTTTTTTGTACATATCCCATATGTCTTGATATTGAAT 93660 ||||||| || || || || || || |||||||| | ||| | || || | | || Sbjct 13735 AGCAGTCCAGAAGGAGGCCTCAGCCTTCTTGTACATCTGCCAGACCTCGTGGAACTTGAT 13794 Query 93661 TGGAAATATGACAAAACGATTAGGGTTA 93688 || || | ||| || ||| ||||||| Sbjct 13795 GGGGAAGAGGACGAAGCGACGAGGGTTA 13822 Score = 98.7 bits (108), Expect = 1e-15 Identities = 120/164 (73%), Gaps = 0/164 (0%) Strand=Plus/Plus Query 93089 AAGCACGCAAAGTCGGTATGTAAACCTTCGTCTCGTGATATCAACTCATTGCTGAATGTT 93148 ||||| ||||||||||| || | ||| ||||| || || || | ||| || ||| || Sbjct 12828 AAGCAGGCAAAGTCGGTGTGGAGACCCTCGTCACGAGAGATGAGCTCGTTCGAGAAGGTG 12887 Query 93149 AAACCTGGTAACAGTCCTCGTTTCTTGAGCCAAAATATTGAAGCAAAACTACCAGaaaaa 93208 | || || | || || || ||||||||||| || || || || || ||||| || Sbjct 12888 AGGCCGGGCATGAGACCACGCTTCTTGAGCCAGAAGATGGAGGCGAACGATCCAGAGAAG 12947 Query 93209 aaTATACCTTCCACGGCTGCAAATGCCACAATACGTTCGGCAAA 93252 || |||||||| ||||| ||||| || |||| ||| || ||||| Sbjct 12948 AAGATACCTTCGACGGCGGCAAAGGCAACAAGACGCTCAGCAAA 12991 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 556847142988880