Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mortierella_20alpina_20[genbank_20GCA_5F001021685.1_202015-06-08] 1,962 sequences; 36,305,198 total letters Query= NC_009899.1 Length=344691 Score E Sequences producing significant alignments: (Bits) Value seq122 125 2e-23 seq1865 109 1e-18 seq1263 105 1e-17 seq1158 98.7 2e-15 seq970 95.1 3e-14 >seq122 Length=94430 Score = 125 bits (138), Expect = 2e-23 Identities = 189/268 (71%), Gaps = 3/268 (1%) Strand=Plus/Minus Query 333724 TCTTCACGAACTCGGACAGATTTCCCTTGTACTTCTTCAGCTTTAGGTTAGGTTCGTAAT 333783 |||| || |||||||||||||| ||||||||| |||| ||||| || | || || | Sbjct 65287 TCTTGACAAACTCGGACAGATTGCCCTTGTACATCTTGAGCTTC---TTGCGCTCATAGT 65231 Query 333784 GGATAATAGAGGTGCAAACAGCGTCGAGGAACCCGGAGTCGTGTGACACAATCACGCACG 333843 | | ||| |||||| ||| ||| ||||| | |||||||| || ||||| | | | Sbjct 65230 GCAAGATATTGGTGCACACATTGTCCAGGAAGCTCGAGTCGTGCGATACAATAATCGAGG 65171 Query 333844 AAACGTCCTTAAGGTTGATCAGGTATTCAATCAGCCACCTCACGTTAGACACAGAAAGAT 333903 || | | || |||||||||| || |||||| | | ||| | ||| | | Sbjct 65170 TGACATTGGTCTGGCTGATCAGGTAGTCCTCCAGCCATTTGATGTTGGTCACGTCCAAGT 65111 Query 333904 GGTTGGTCGGCTCGTCAAGAAGTAGTAGCTTTGCGTTCAGGAGCATTGCACGTGCAAGAG 333963 | |||||||| ||||| | || || | | ||||||| |||||| ||||| || || Sbjct 65110 GATTGGTCGGTTCGTCCAACAGCAGGATATCCGCGTTCATGAGCATGGCACGGGCCAGTT 65051 Query 333964 CGAGTTTCATTTTCCACCCTCCTGAAAG 333991 | || ||||||||||| ||||| ||||| Sbjct 65050 CCAGCTTCATTTTCCAGCCTCCCGAAAG 65023 >seq1865 Length=14677 Score = 109 bits (120), Expect = 1e-18 Identities = 430/666 (65%), Gaps = 23/666 (3%) Strand=Plus/Minus Query 333336 TAACGCCATTGGATATACTGGTTGGGTGTCATGTCAAGATGATCCTCGATGTGGTGGAAA 333395 |||||||| ||||| || |||||| ||| | || | ||| | ||| | |||||||| Sbjct 3095 TAACGCCACTGGATGTAGGCGTTGGGGGTCTTCTCCAAATGCTGCTCCAAATGGTGGAAG 3036 Query 333396 GCATGCTGTGCCACGTAAGCAAGACGCATATTTGGATGCTTCCAAACACTTCCGT--TGG 333453 || ||||| || |||||| ||| ||| | || ||||| |||| || |||| | ||| Sbjct 3035 GCGTGCTGAGCAACGTAACCAATACGGAGGTTGGGATGTCTCCAGACGGTTCCCTCCTGG 2976 Query 333454 TGGCTT--CCATTTGCCCCGTGAGCACCTTAATGAGAGTGCTTTTTCCCGCACCATTTTC 333511 || | || | || ||||| | ||| || | || ||||| ||||| || Sbjct 2975 -GGATAGGCC---TCACCGGTGAGGAGCTTGATCATGGTTGACTTTCCAGCACCGTTGGG 2920 Query 333512 GCCTACCACACCAATCCTGGAGTTCAGCGATACCTGGGCATTCACGTTGT-CAAAGATTA 333570 || | ||||| | | ||| ||||| | |||| | ||| || ||| || Sbjct 2919 TCCAATGACACCGACACGGGATGAGAGCGAGAGCTGGACCGAGACGCCGTGCAACGAAG- 2861 Query 333571 GTTTTTCCGTACCCGGATACTTGAACCCCACACCGCGTAGCTTCATGATGGCACGGTCCT 333630 | || | | ||| || || |||| || | |||||||||||| | | Sbjct 2860 GCTTGGCAGAACCAGGGTAGGTGAATGTGCAGTTGCTCATCTTCATGATGGCCTTGGTGT 2801 Query 333631 TCGAAGTGATACCCTCGAGGAACCCGGGCTCGGGGAACTTCCACGTGGTCTTCGTCTCGG 333690 | || ||| || | | |||| ||||| |||||||| || || | || ||| Sbjct 2800 TGGACTTGACGCCGACCAAGAACGAGGGCTTGGGGAACTCGAACTTGACAGTGGTGGCGG 2741 Query 333691 TAAGGGCGTAGTA--ACTCGCTGATTCGGGACGCTT---CTTCACGAACTCGGACAGATT 333745 |||| |||||| ||| | | |||| |||| ||| || |||||||| || || Sbjct 2740 CGAGGGTGTAGTAGGACTTG--GCCTCGG---GCTTGACCTTGACAAACTCGGAGAGGTT 2686 Query 333746 TCCCTTGTACTTCTTCAGCTTTAGGTTAGGTTCGTAATGGATAATAGAGGTGCAAACAGC 333805 ||||||||| |||||||||| || | ||||| || | ||| |||||| || Sbjct 2685 ACCCTTGTACATCTTCAGCTT---CTTGCGCTCGTAGTGCAGAATGTTGGTGCAGACGTT 2629 Query 333806 GTCGAGGAACCCGGAGTCGTGTGACACAATCACGCACGAAACGTCCTTAAGGTTGATCAG 333865 |||||||| || |||||||| || || || | | | |||| | || |||| || Sbjct 2628 ATCGAGGAATCCAGAGTCGTGAGAAACGATGATCGAGGTGACGTTGGTCTGGCTGATGAG 2569 Query 333866 GTATTCAATCAGCCACCTCACGTTAGACACAGAAAGATGGTTGGTCGGCTCGTCAAGAAG 333925 ||| || || |||| | | ||| | ||| | ||| ||||| || ||||| || | Sbjct 2568 GTAATCCTCCAACCACTTGATGTTGGCAACATCCAAATGATTGGTAGGTTCGTCCAGCAA 2509 Query 333926 TAGTAGCTTTGCGTTCAGGAGCATTGCACGTGCAAGAGCGAGTTTCATTTTCCACCCTCC 333985 || | | ||||||| | ||| ||||| || | | | ||||| ||||| ||||| Sbjct 2508 GAGAATATCGGCGTTCATCAACATGGCACGGGCCAACTCCAACTTCATCTTCCAGCCTCC 2449 Query 333986 TGAAAG 333991 ||| || Sbjct 2448 TGAGAG 2443 >seq1263 Length=39644 Score = 105 bits (116), Expect = 1e-17 Identities = 308/468 (66%), Gaps = 6/468 (1%) Strand=Plus/Minus Query 243289 TTTGCTGAGCGTCTCGTCGCCTGGGTGTGCGTTGAAGGTATTCTGTTTTCCGGGAGTTTC 243348 |||||||||||||| || |||| | ||| |||||||| | || || || ||| Sbjct 12991 TTTGCTGAGCGTCTTGTTGCCTTTGCCGCCGTCGAAGGTATCTTCTTCTCTGGATCGTTC 12932 Query 243349 TGCGCCATCTTTTGGCTGCGGAACAAAGGTGTGATGCCTGGCCTCGGTCTGTCTAACGAG 243408 | ||||||| ||||| ||| ||| | ||||| |||||| | || |||||| Sbjct 12931 GCCTCCATCTTCTGGCTCAAGAAGCGTGGTCTCATGCCCGGCCTCACCTTCTCGAACGAG 12872 Query 243409 TTCATCAGTCGCGACGAGGGCCTTCACCAACAGTTCGGTGAGCTTATGTATTCAAAGCTC 243468 ||||| ||| |||||||| || ||| | || | |||| | ||| |||| Sbjct 12871 CTCATCTCTCGTGACGAGGGTCTCCACACCGACTTTGCCT-GCTTGC-TCTTCTC-GCTC 12815 Query 243469 CAGAACAAGCTACCATTC--GAAACG-GTCAAACAAATCATCACAGAAGCAGTTGAAAAC 243525 ||| | | || | ||| || ||| | |||||||| || || || | | | Sbjct 12814 ATGAAGAGCCGTCCTGACCAGAAGCGTGTCTGTGACATCATCACCGAGGCTGTCGCCATC 12755 Query 243526 GAAAAGGAATTCATTTGCGACGCTATTCCATGCCGGCTTATTGGCATGAACTCTGAACTC 243585 || | || ||| | || ||| | || | ||| || ||||||||| | | ||| Sbjct 12754 GAGCAAGAGTTCCTCACGGATGCTCTCCCCGTCATGCTGATCGGCATGAACGCCAAGCTC 12695 Query 243586 ATGGGACAGTACATCGAATTCGTAGCCGACCGCATTTTCATCGCGCTTGGTTATGAGAAA 243645 ||| ||||||||||| || || || ||||| | || |||| || ||| | || Sbjct 12694 ATGAAGCAGTACATCGAGTTTGTTGCTGACCGTCTGCTCGTCGCTCTCGGTAACCCCAAG 12635 Query 243646 GTGTACAACTCCAAGAACCCCTTTGCCTTTATGGAGCTCATTTCGCTTCAAGGGAAAACT 243705 |||||| | |||||||||| | ||||||||| | || || || || || || || Sbjct 12634 CATTACAACGTCGAGAACCCCTTCGACTTTATGGACTTGATCTCACTCCAGGGCAAGACC 12575 Query 243706 AACTTCTTCGAAAAGCGTGTCAGTGATTATCAACGCCCTGGTGTGATG 243753 |||||||| || ||||||||| ||||| || ||||||| ||| Sbjct 12574 AACTTCTTTGAGAAGCGTGTCTCGGATTACCAGAAGGCTGGTGTCATG 12527 >seq1158 Length=61938 Score = 98.7 bits (108), Expect = 2e-15 Identities = 245/368 (67%), Gaps = 7/368 (2%) Strand=Plus/Minus Query 333626 GTCCTTCGAAGTGATACCCTCGAGGAACCCGGGCTCGGGGAACTTCCACGTGGTCTTCGT 333685 ||||||||| ||| ||| || | ||| || ||||| || | ||| |||| | | Sbjct 54630 GTCCTTCGACTTGACACCATCCAAGAAACCTGGCTCAGGAAGCTTGAACGTCACCAGTGA 54571 Query 333686 CTCGGTAAGGGCGTAGTAACTCGCTGATTCGGGACGCTTCTTCACGAACTCGGACAGATT 333745 |||| | ||||| | || || ||| || || |||||||| ||||||||| Sbjct 54570 AGACTTAAGCTCATAGTAGGACTTTGCGTCCGGATACTGCTCCACGAACTTGGACAGATT 54511 Query 333746 TCCCTTGTACTTCTTCAGCTTTAGGTTAGGTTCGTAATGGATAATAGAGGTGCAAACAGC 333805 || |||||| ||||||||| |||| ||||| ||||| || ||||| | Sbjct 54510 GCCACGGTACTTTTTCAGCTTTCGGTTC---TCGTAGTGGATGATGCCCGTGCAGCACGT 54454 Query 333806 GTCGAGGAACCCGGAGTCGTGTGACACAATCACGCACGAAACGTCCTTAAGGTTGATCAG 333865 || |||||| ||| ||||| || ||||||| | | |||| | || || |||| Sbjct 54453 ATCAAGGAACGAGGAATCGTGCGAGACAATCATCGAGGTGACGTTGGTGAGACTGGTCAG 54394 Query 333866 GTA-TTCAATC-AGCCACCTCACGTTAGACACAGAAAGATGGTTGGTCGGCTCGTCAAGA 333923 || ||| || ||||| |||||| || ||||||||||| |||||||| || Sbjct 54393 ATAGTTC--TCGAGCCAGGCCACGTTGTTGACGTCCAGATGGTTGGTGGGCTCGTCCAGC 54336 Query 333924 AGTAGTAGCTTTGCGTTCAGGAGCATTGCACGTGCAAGAGCGAGTTTCATTTTCCACCCT 333983 || | | | ||||||| |||||| || || || | | || ||||| ||||| || Sbjct 54335 AGCAAAATATCGGCGTTCATGAGCATAGCGCGCGCCAACTCCAGCTTCATCTTCCAACCA 54276 Query 333984 CCTGAAAG 333991 || || || Sbjct 54275 CCGGAGAG 54268 >seq970 Length=561 Score = 95.1 bits (104), Expect = 3e-14 Identities = 316/489 (65%), Gaps = 7/489 (1%) Strand=Plus/Plus Query 333336 TAACGCCATTGGATATACTGGTTGGGTGTCATGTCAAGATGATCCTCGATGTGGTGGAAA 333395 |||||||| | || |||| |||||| ||| |||| | || | ||||| |||||||||| Sbjct 78 TAACGCCAGCGAATGTACTCGTTGGGGGTCTTGTCCAAGTGCTGCTCGACGTGGTGGAAA 137 Query 333396 GCATGCTGTGCCACGTAAGCAAGACGCATATTTGGATGCTTCCAAACACTTCCGTTGGTG 333455 || ||||| || ||||| || | ||| | || || ||||| |||| |||| |||| Sbjct 138 GCGTGCTGGGCGACGTAGGCGACACGAACGTTAGGGTGCTTGGTAACAACACCGTCGGTG 197 Query 333456 GCTTCCATTTGCCCCGTGAGCACCTTAATGAGAGTGCTTTTTCCCGCACCATTTTCGCCT 333515 | | | | || || | ||||| ||||| ||| ||||| ||||| || || Sbjct 198 GGGACGGTCTCACCGGTCAAGACCTTGATGAGGGTGGACTTTCCGGCACCGTTGGGTCCA 257 Query 333516 ACCACACCAATCCTGGAGTTCAGCGATACCTGGGCATTCACGTTGTCAAAGATTAGTTTT 333575 | || | | | ||||| ||||| |||||| || ||| | | | | || Sbjct 258 ATGACGGCGACACGAGAGTTGAGCGAGACCTGGCACGACATGTTCATGATGGTCAACTTG 317 Query 333576 TCCGTACCCGGATACTTGAACCCCACACCGCGTAGCTTCATGATGGCACGGTCCTTCGAA 333635 | || || || || | | | ||||| | | || ||||| || Sbjct 318 GTGGAGCCGGGGTAGGCAAAGTCAATGTTCTGGAGCTTGACAAGAGCCTTATCCTTGGAC 377 Query 333636 GTGATACCCTCGAGGAACCCGGGCTCGGGGAACTTCCACGTGGTCTTCGTCTCGGTAAGG 333695 ||| ||| || | ||| ||||||||||||| ||| | | | || | | | Sbjct 378 TTGACACCGTCCAAGAAACCGGGCTCGGGGAGCTTGAAGGCAATGGGCGAGGCCGACAAC 437 Query 333696 GCGTAGTA--ACTCGCTGATTCGGGACGCTTCTTCACGAACTCGGACAGATTTCCCTTGT 333753 ||||||| ||| || | ||| || || || |||| ||||| || ||||||| Sbjct 438 TCGTAGTAGGACTTGC--CCTGGGGGTACTGCTCAACAAACTTGGACAAGTTACCCTTGT 495 Query 333754 ACTTCTTCAGCTTTAGGTTAGGTTCGTAATGGATAATAGAGGTGCAAACAGCGTCGAGGA 333813 ||||||| ||||| || | ||||| ||||||||| ||||| ||||||||||||| Sbjct 496 ACTTCTTGAGCTTGCGG---GTCTCGTAGTGGATAATACCCGTGCAGACAGCGTCGAGGA 552 Query 333814 ACCCGGAGT 333822 | || |||| Sbjct 553 ATCCAGAGT 561 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1102852275664700