Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mortierella_20alpina_20[genbank_20GCA_5F001021685.1_202015-06-08] 1,962 sequences; 36,305,198 total letters Query= NC_010276.1 Length=156179 Score E Sequences producing significant alignments: (Bits) Value seq1237 132 5e-26 seq1899 113 5e-20 seq1584 89.7 5e-13 seq1939 84.2 2e-11 seq1254 84.2 2e-11 >seq1237 Length=85294 Score = 132 bits (146), Expect = 5e-26 Identities = 151/203 (74%), Gaps = 0/203 (0%) Strand=Plus/Plus Query 64241 TGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCTTCAAGCTGC 64300 |||| ||||| || || || || ||||| || | || ||| || |||| || |||||| Sbjct 35509 TGAAGGGTCGACTCCTTCTGGATATTGTAGTCAGAGAGGGTACGGCCGTCCTCGAGCTGC 35568 Query 64301 TTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCTTGTATTTTT 64360 ||||||||| | ||||| ||||||||||| || ||||| || || || ||||| || || Sbjct 35569 TTGCCGGCAAAGATGAGACGCTGCTGGTCTGGGGGAATGCCCTCCTTGTCTTGGATCTTC 35628 Query 64361 TGCTTTACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTCTTGCCGGTC 64420 ||||| ||| || | || || | ||||| || | || | ||||||||||||| Sbjct 35629 TGCTTGACATTGTCAATGGTGTCCGAAGACTCCACCTCCAACGTGATGGTCTTGCCGGTC 35688 Query 64421 AAAGTTTTTACGAAAATTTGCAT 64443 || || || |||||||| ||||| Sbjct 35689 AAGGTCTTGACGAAAATCTGCAT 35711 Score = 114 bits (126), Expect = 1e-20 Identities = 147/203 (72%), Gaps = 0/203 (0%) Strand=Plus/Plus Query 64241 TGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCTTCAAGCTGC 64300 |||| ||||| || || ||||| ||||| || | || ||| || |||| || |||||| Sbjct 36044 TGAAGGGTCGACTCCTTCTGAATATTGTAGTCAGAGAGGGTACGGCCGTCCTCGAGCTGC 36103 Query 64301 TTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCTTGTATTTTT 64360 |||||||| | ||||| ||||||||||| ||||| || || || || ||||| || || Sbjct 36104 TTGCCGGCGAAGATGAGACGCTGCTGGTCTGGAGGGATACCCTCCTTGTCTTGAATCTTC 36163 Query 64361 TGCTTTACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTCTTGCCGGTC 64420 ||||| || || | || || | || || || | || | |||||||||||| Sbjct 36164 TGCTTGACGTTGTCAATGGTGTCCGAAGACTCGACCTCGAGGGTGATGGTCTTGCCGGTA 36223 Query 64421 AAAGTTTTTACGAAAATTTGCAT 64443 | || || |||||||| ||||| Sbjct 36224 AGGGTCTTGACGAAAATCTGCAT 36246 Score = 105 bits (116), Expect = 7e-18 Identities = 100/128 (78%), Gaps = 0/128 (0%) Strand=Plus/Plus Query 64241 TGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCTTCAAGCTGC 64300 |||| ||||| || || || |||||||| || | || ||| || |||| ||||||||| Sbjct 35737 TGAAGGGTCGACTCCTTCTGGATGTTGTAGTCAGAGAGGGTACGGCCGTCCTCAAGCTGC 35796 Query 64301 TTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCTTGTATTTTT 64360 ||||||||| | ||||| ||||||||||| || || || || || || ||||| || || Sbjct 35797 TTGCCGGCAAAGATGAGACGCTGCTGGTCTGGGGGGATACCCTCCTTATCTTGGATCTTC 35856 Query 64361 TGCTTTAC 64368 ||||| || Sbjct 35857 TGCTTGAC 35864 >seq1899 Length=11869 Score = 113 bits (124), Expect = 5e-20 Identities = 143/197 (73%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 64247 GTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCTTCAAGCTGCTTGCCG 64306 ||||| || || || ||||||||||| | || ||| || |||| || |||||||||||| Sbjct 5517 GTCGACTCCTTCTGGATGTTGTAATCAGAGAGGGTACGGCCGTCCTCGAGCTGCTTGCCG 5576 Query 64307 GCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCTTGTATTTTTTGCTTT 64366 ||| | ||||| ||||||||||| || || || || || || || || || || ||||| Sbjct 5577 GCAAAGATGAGACGCTGCTGGTCTGGGGGGATGCCCTCCTTGTCCTGAATCTTCTGCTTG 5636 Query 64367 ACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTCTTGCCGGTCAAAGTT 64426 || || | ||||| | || || || | || | |||||| || |||| || Sbjct 5637 ACGTTATCGATGGTATCGGACGACTCGACCTCGAGGGTGATGGTCTTACCAGTCAGGGTC 5696 Query 64427 TTTACGAAAATTTGCAT 64443 || |||||||| ||||| Sbjct 5697 TTGACGAAAATCTGCAT 5713 Score = 105 bits (116), Expect = 7e-18 Identities = 100/128 (78%), Gaps = 0/128 (0%) Strand=Plus/Plus Query 64241 TGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCTTCAAGCTGC 64300 |||| || || || || || |||||||| || | || |||||| |||| ||||||||| Sbjct 5739 TGAAGAGTGGACTCCTTCTGGATGTTGTAGTCCGAGAGGGTGCGGCCGTCCTCAAGCTGC 5798 Query 64301 TTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCTTGTATTTTT 64360 ||||||||| | ||||| ||||||||||| || || || || || || ||||| || || Sbjct 5799 TTGCCGGCAAAGATGAGGCGCTGCTGGTCTGGGGGGATACCCTCCTTATCTTGGATCTTC 5858 Query 64361 TGCTTTAC 64368 ||||| || Sbjct 5859 TGCTTGAC 5866 >seq1584 Length=118991 Score = 89.7 bits (98), Expect = 5e-13 Identities = 81/102 (79%), Gaps = 0/102 (0%) Strand=Plus/Plus Query 64241 TGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCTTCAAGCTGC 64300 |||| ||||| || || || ||||||||||| | || ||||| | || ||||||||| Sbjct 13667 TGAAGGGTCGACTCCTTCTGGATGTTGTAATCCGAGAGAGTGCGGCCATCCTCAAGCTGC 13726 Query 64301 TTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCT 64342 ||||||||| | || || ||||||||||| || ||||| ||| Sbjct 13727 TTGCCGGCAAAGATCAGGCGCTGCTGGTCTGGGGGAATACCT 13768 >seq1939 Length=69097 Score = 84.2 bits (92), Expect = 2e-11 Identities = 106/146 (73%), Gaps = 0/146 (0%) Strand=Plus/Plus Query 154590 GCCAAGTTGCAAACGGCAATTTCTTCAGAACTACTGTATTGCACAATTTCTGCGCACAAA 154649 ||||||||||| || || | || || | ||| ||||| | ||||| |||| |||||| Sbjct 1975 GCCAAGTTGCACACAGCCACCTCGTCGGGACTGCTGTACTCGACAATCTCTGTGCACAAG 2034 Query 154650 TTACTGCATCGAATGGTGCCCAGGTTTTTCTGATTCGATTTGATGTTGCATGCGTCTTTG 154709 || ||| |||||| |||| ||||| ||| || || ||| |||||| || || ||| Sbjct 2035 TTGGAGCACTTAATGGTTCCCAAGTTTTGCTGGTTGGACTTGCGGTTGCAGGCATCCTTG 2094 Query 154710 TACAAAATGTACGGGGTGCCCGTTTC 154735 || | || || || || ||||| || Sbjct 2095 TAAAGCATATAGGGCGTTCCCGTCTC 2120 >seq1254 Length=67957 Score = 84.2 bits (92), Expect = 2e-11 Identities = 76/96 (79%), Gaps = 0/96 (0%) Strand=Plus/Minus Query 64247 GTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCTTCAAGCTGCTTGCCG 64306 ||||| || || || |||||||| || | || ||||| | || ||||||||||||||| Sbjct 3357 GTCGACTCCTTCTGGATGTTGTAGTCCGAGAGAGTGCGGCCATCCTCAAGCTGCTTGCCG 3298 Query 64307 GCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCT 64342 || | ||||| ||||||||||| || ||||| ||| Sbjct 3297 GCGAAGATGAGGCGCTGCTGGTCTGGGGGAATACCT 3262 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 499632546211280