Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mortierella_20alpina_20[genbank_20GCA_5F001021685.1_202015-06-08] 1,962 sequences; 36,305,198 total letters Query= NC_011345.1 Length=155122 Score E Sequences producing significant alignments: (Bits) Value seq1221 159 3e-34 seq1263 150 2e-31 seq1899 125 7e-24 seq1237 113 4e-20 >seq1221 Length=39966 Score = 159 bits (176), Expect = 3e-34 Identities = 611/951 (64%), Gaps = 19/951 (2%) Strand=Plus/Minus Query 153606 GCCAGATTACAGACGGCCGTCTCTTCGGCGTCGCTGTACTGCACGATCTCGGCGCAGAGG 153665 |||||||||||||| ||| |||||||| | |||||||| | |||||| | ||| ||| Sbjct 35140 GCCAGATTACAGACCGCCACCTCTTCGGGGCTGCTGTACTCGATGATCTCAGTGCACAGG 35081 Query 153666 TTGCTGCATTTTATGACGCCCAAATTTTGCTGATTGCTTTTGCGATTGCACGCGTCTTTG 153725 || ||| || ||| ||||| ||| ||||| ||| ||| |||||||| ||||| ||| Sbjct 35080 TTCGAGCACTTGATGGTGCCCAGATTCTGCTGGTTGGATTTACGATTGCAGGCGTCCTTG 35021 Query 153726 AAGAGCATGTACGGTCCGCCGGTCTCGACTTGCGTTTCGACGAT---AAACCTATGCAGG 153782 | |||||||| || ||||||||| |||| |||| ||| |||| ||| Sbjct 35020 TAAAGCATGTAAGGGGTCCCGGTCTCGGTCTGCGACTCGAGGATCGCGAACC---ACAGC 34964 Query 153783 TCCTGCGCTCGCACCCGCTGCCGATAGCGGCCCTCGCTCTCGTATCGCTCGTACAGTCGC 153842 | || || | | || ||| || ||||| |||||||| | ||| || | Sbjct 34963 TTTTGGGCCTTGATCGTCTTTCGAGCTCGACCCTCTTGTTCGTATCGGTGGTAGAGGTCC 34904 Query 153843 TCAAACTCGTCGCCGTAGCAGTCGGCGAGGCCGGGACACTGATGC-GGACACATCAGCGA 153901 || |||| ||| || || ||| ||||| || || ||| ||||| | || || Sbjct 34903 TCGAACTGGTCCCCCCAGACGTCTTGAAGGCCCGGTGCCT-CTGCAGGACAGAAGAGGGA 34845 Query 153902 CCACATATCGTCGGCGTTGACGCGTCGCATGAACAGATCCGGCACCCAGAGCGCGTACAT 153961 ||| | ||| | | || |||||||||||||||||| || | ||| ||||| | | Sbjct 34844 CCAGTCACCGTTTTCTTCGATGCGTCGCATGAACAGATCAGGGATCCACAGCGCAAAGAA 34785 Query 153962 GAGGTCGCGCGCCTTGCAATCCTCCGCGCCCATG---TTGCGTTTCAGATTGAGCACGCT 154018 || || || || | || ||| |||| || ||||| ||| | || | Sbjct 34784 CAGATCACGGGCGCGGGTCTCTTCCTTGCCCGTGTTCTTGCG---CAGGTCCAGGAAATC 34728 Query 154019 ATAGATGTCGGCGTGCCAGGGTTCAATGTAGACGGCCAGGGCACCTTTACGC---TTTCC 154075 | ||| ||||| ||||| || || | ||| | ||| | |||||| ||| || || Sbjct 34727 AAAGACATCGGCATGCCACGGCTCGAGGTACATGGCAAAGGCACCCGGTCGCTTGTTGCC 34668 Query 154076 GCCCTGATCGACGTGGCGCACCATATTGTTGAAGACGCGCACCATGGGTTCCAGGCCGCT 154135 || ||||| || | || || | ||||||||||| | || |||||| ||| || | Sbjct 34667 ACCTTGATCCACATACCGAGCCGTGTTGTTGAAGACCCTCAGCATGGGGATCAGACCATT 34608 Query 154136 TGCGGTGCCGTTGGTCGAATTGATCTTGCTGCCGCGGGCGCGCACTTGATGCACGTTAAC 154195 | | |||||| || ||| | | ||| || || | | || | ||| | Sbjct 34607 CGAGTAGCCGTTCGTGCCGGCGATGTAGGATCCGGACGCACGGATGTTGTGGATGTTGAG 34548 Query 154196 GCCAATGCCGCC-GCCGTACTTTGATATGGCAGCGCAGTCGCCCAGCGTCCTGTAGATGC 154254 |||||||| || ||||| ||| || || || ||| || || |||||| | Sbjct 34547 ACCAATGCCTCCGGCCGT-CTTGGAGATCATGGCACAGGTCTTGAGGGTATCGTAGATCC 34489 Query 154255 CGTCGATGCTATCGTCGCGGACGCCGAGCAAGAAACACGAACACATTTGCGGAATGCGCG 154314 | ||||| ||||| | ||| | |||||| ||||||| || | ||| Sbjct 34488 CCTCGATCGAGTCGTCCTTCATAGTGAGGAGGAAACAGCTGGACATTTGTGGCCGGGGCG 34429 Query 154315 TTCCCGCCGAAAAGAGGGTGGGACTCGCGTGCGTAAACAGTTTTTGGCTCATCATGCGGT 154374 | || || || || || || ||| || || || | ||||| | ||| | || Sbjct 34428 TGCCGGCATTGAACAGCGTCGGGGACGCATGGGTGAAGAATTTTTCGGACATGTAGTTGT 34369 Query 154375 ACGTTTCGATGGCGTCTTCGATATCATCGCCGTGAATGCCGAGCGCGACGCGCATGAGCA 154434 | || |||||||| | |||| | | || ||||||| ||||||||||| |||| Sbjct 34368 AGGTCTCGATGGCCTTGTCGACGTTCTGACCCCAGATGCCGACGGCGACGCGCATCAGCA 34309 Query 154435 TGTGCTGCGGACGTTCGGCGACTCTATTGTCAATCTTCAAGAGATATCCATTTTCGAGGG 154494 ||||| || || || |||| | ||| ||||| | ||| || ||||||| Sbjct 34308 GATGCTGAGGTCGCTCTGCGATCTTGCCGTCGATCTTGAGGAGGTAGGAGCGCTCGAGGG 34249 Query 154495 TTTTGTAACCGAAATACTTGTATTCAAAATCTAGCTCATGAGCGATGGCCG 154545 | ||| | || || || ||||||| || || | |||| |||||||| Sbjct 34248 TCTTGAAGCCAAAGTAGTTGTATTGGAAGTCACGGTCATAGATGATGGCCG 34198 >seq1263 Length=39644 Score = 150 bits (166), Expect = 2e-31 Identities = 344/512 (67%), Gaps = 13/512 (3%) Strand=Plus/Minus Query 52323 CACGTGCCGTGCGTTCGCAAAAAGGCTCAGTGGGCAATGAAGTGGATCGAGAGCGACACC 52382 || || || ||| ||||||| |||||| ||||| ||||||||||| | | || | Sbjct 13057 CAAGTTCCCTGCATTCGCAAGAAGGCTGCCTGGGCCCTGAAGTGGATCTCGGATGCCAAC 12998 Query 52383 GCCACGCTGGCCGAGCGCATGGTGGCCTTCGCCATAGTCGAGGGCGTGtttttttCCGGC 52442 | || | || ||||| | || ||||| ||| ||||| || | || || || || Sbjct 12997 TCGACCTTTGCTGAGCGTCTTGTTGCCTTTGCCGCCGTCGAAGGTATCTTCTTCTCTGGA 12938 Query 52443 AGCTTTGCCGCCATCTTTTACATTAAAACGAAAGGCATAATGCCCGGCCTGACGTTCAGC 52502 || ||| ||||||| | | || | | || | ||||||||||| || ||| Sbjct 12937 TCGTTCGCCTCCATCTTCTGGCTCAAGAAGCGTGGTCTCATGCCCGGCCTCACCTTCTCG 12878 Query 52503 AACGAGTTGATATCGCGCGACGAAGGACTGCACACGGACTTTGCGTGC---CTCTACTAC 52559 |||||| | || || || ||||| || || ||||| |||||||| ||| |||| || Sbjct 12877 AACGAGCTCATCTCTCGTGACGAGGGTCTCCACACCGACTTTGCCTGCTTGCTCTTCT-- 12820 Query 52560 AAGACGCGCGTGACCGAAAAATTGGATTCGGACACGATCCTGAG-CATGTTCAAGGAGGC 52618 ||| | ||| || | | || || ||| | ||| ||| ||||| Sbjct 12819 ----CGCTCATGAA-GAGCCGTCCTGACCAGAAGCGTGTCTGTGACATCATCACCGAGGC 12765 Query 52619 GGTGGCTATCGAAAAGGAGTTTTTTACGGCCGCGCTGCCGGTCGAGCTGCTGGGCATGAA 52678 || || ||||| | ||||| | |||| || || || ||| |||| | |||||||| Sbjct 12764 TGTCGCCATCGAGCAAGAGTTCCTCACGGATGCTCTCCCCGTCATGCTGATCGGCATGAA 12705 Query 52679 CGCGCAGTCCATGTGCGAGTACATCGAGTTTGTGGCGGATCGTCTGTTGGTGCAGCTCGG 52738 ||| || |||| |||||||||||||||| || || |||||| | || ||||| Sbjct 12704 CGCCAAGCTCATGAAGCAGTACATCGAGTTTGTTGCTGACCGTCTGCTCGTCGCTCTCGG 12645 Query 52739 GCAGCCAAAGTACTTCAACGCTCGC-AATCCGTTTGAGTTTATGAACAACATTTCGCTTG 52797 | || ||| | | ||||| ||| || || || || |||||| || || || || Sbjct 12644 TAACCCCAAGCATTACAACG-TCGAGAACCCCTTCGACTTTATGGACTTGATCTCACTCC 12586 Query 52798 AGGGCAAGACCAACTTTTTCGAGAAGCGAGTC 52829 |||||||||||||||| || |||||||| ||| Sbjct 12585 AGGGCAAGACCAACTTCTTTGAGAAGCGTGTC 12554 >seq1899 Length=11869 Score = 125 bits (138), Expect = 7e-24 Identities = 165/229 (72%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 138387 GCCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCT 138446 ||| || || | ||| | || ||||| | | | |||||||| || |||||||| || Sbjct 5486 GCCACCACGAAGACGGAGGACCAAATGGAGGGTCGACTCCTTCTGGATGTTGTAATCAGA 5545 Query 138447 CATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGG 138506 | ||||| ||||||||| || || |||| | |||| |||||||| ||||| || || Sbjct 5546 GAGGGTACGGCCGTCCTCGAGCTGCTTGCCGGCAAAGATGAGACGCTGCTGGTCTGGGGG 5605 Query 138507 TATACCTTCTTTGTCGGTGATTTTTTGTTTTAATTGTTCCACGGTGTCGGTCGACTCCAC 138566 || || || ||||| || || || || | | || | ||| |||| |||||| || Sbjct 5606 GATGCCCTCCTTGTCCTGAATCTTCTGCTTGACGTTATCGATGGTATCGGACGACTCGAC 5665 Query 138567 CTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCATG 138615 ||||| || | || ||||||||||| || || || |||||||||||| Sbjct 5666 CTCGAGGGTGATGGTCTTACCAGTCAGGGTCTTGACGAAAATCTGCATG 5714 >seq1237 Length=85294 Score = 113 bits (124), Expect = 4e-20 Identities = 163/230 (71%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 138388 CCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTC 138447 || || || | ||| | || || || | | | |||||||| ||||| |||||||| Sbjct 36020 CCACCACGGAGACGGAGGACCAAGTGAAGGGTCGACTCCTTCTGAATATTGTAGTCAGAG 36079 Query 138448 ATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGT 138507 | ||||| ||||||||| || || |||| |||| |||||||| ||||| ||||| Sbjct 36080 AGGGTACGGCCGTCCTCGAGCTGCTTGCCGGCGAAGATGAGACGCTGCTGGTCTGGAGGG 36139 Query 138508 ATACCTTCTTTGTCGGTGATTTTTTGTTTTAATTGTTCCACGGTGTCGGTCGACTCCACC 138567 ||||| || ||||| || || || || | | || | |||||| | ||||| ||| Sbjct 36140 ATACCCTCCTTGTCTTGAATCTTCTGCTTGACGTTGTCAATGGTGTCCGAAGACTCGACC 36199 Query 138568 TCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCATGGC 138617 |||| || | || || || || || || || || |||||||||||||| Sbjct 36200 TCGAGGGTGATGGTCTTGCCGGTAAGGGTCTTGACGAAAATCTGCATGGC 36249 Score = 111 bits (122), Expect = 2e-19 Identities = 163/228 (71%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 138388 CCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTC 138447 || || || | ||| | || || || | | | |||||||| || || |||||||| Sbjct 35485 CCACCACGGAGACGGAGGACCAAGTGAAGGGTCGACTCCTTCTGGATATTGTAGTCAGAG 35544 Query 138448 ATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGT 138507 | ||||| ||||||||| || || |||| | |||| |||||||| ||||| || || Sbjct 35545 AGGGTACGGCCGTCCTCGAGCTGCTTGCCGGCAAAGATGAGACGCTGCTGGTCTGGGGGA 35604 Query 138508 ATACCTTCTTTGTCGGTGATTTTTTGTTTTA-ATTGTTCCACGGTGTCGGTCGACTCCAC 138566 || || || ||||| ||| || || || | ||||| | | |||||| | |||||||| Sbjct 35605 ATGCCCTCCTTGTCTTGGATCTTCTGCTTGACATTGT-CAATGGTGTCCGAAGACTCCAC 35663 Query 138567 CTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCAT 138614 ||| | ||| | || || || |||| || || || ||||||||||| Sbjct 35664 CTCCAACGTGATGGTCTTGCCGGTCAAGGTCTTGACGAAAATCTGCAT 35711 Score = 89.7 bits (98), Expect = 5e-13 Identities = 130/184 (71%), Gaps = 0/184 (0%) Strand=Plus/Plus Query 138388 CCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTC 138447 || || || | ||| | || || || | | | |||||||| || ||||||||||| Sbjct 35713 CCACCACGGAGACGGAGGACCAAGTGAAGGGTCGACTCCTTCTGGATGTTGTAGTCAGAG 35772 Query 138448 ATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGT 138507 | ||||| |||||| || || || |||| | |||| |||||||| ||||| || || Sbjct 35773 AGGGTACGGCCGTCCTCAAGCTGCTTGCCGGCAAAGATGAGACGCTGCTGGTCTGGGGGG 35832 Query 138508 ATACCTTCTTTGTCGGTGATTTTTTGTTTTAATTGTTCCACGGTGTCGGTCGACTCCACC 138567 ||||| || || || ||| || || || | | || | |||||| | |||||| ||| Sbjct 35833 ATACCCTCCTTATCTTGGATCTTCTGCTTGACGTTGTCGATGGTGTCCGACGACTCGACC 35892 Query 138568 TCGA 138571 |||| Sbjct 35893 TCGA 35896 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 496250229164640