Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mortierella_20alpina_20[genbank_20GCA_5F001021685.1_202015-06-08] 1,962 sequences; 36,305,198 total letters Query= NC_012639.1 Length=141291 Score E Sequences producing significant alignments: (Bits) Value seq1237 96.9 3e-15 seq1939 89.7 5e-13 >seq1237 Length=85294 Score = 96.9 bits (106), Expect = 3e-15 Identities = 114/152 (75%), Gaps = 2/152 (1%) Strand=Plus/Plus Query 45195 TGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGAATGCCTTCTTTATCTTGAATT 45254 || || || ||| | || | || |||||||| || || || || || || |||||||| Sbjct 36101 TGCTTGCCGGCGAAGATGAGACGCTGCTGGTCTGGAGGGATACCCTCCTTGTCTTGAATC 36160 Query 45255 TTTTGTTTGATCGCT-TCTACGGTGTCGGAAGACTCGACTTCGAGAGTAACCGTTTTGCC 45313 || || |||| || | || | |||||| ||||||||||| ||||| || | || ||||| Sbjct 36161 TTCTGCTTGA-CGTTGTCAATGGTGTCCGAAGACTCGACCTCGAGGGTGATGGTCTTGCC 36219 Query 45314 GGTTAGAGTTTTTACAAAAATTTGCATCGCGC 45345 ||| || || || || ||||| ||||| |||| Sbjct 36220 GGTAAGGGTCTTGACGAAAATCTGCATGGCGC 36251 >seq1939 Length=69097 Score = 89.7 bits (98), Expect = 5e-13 Identities = 108/147 (73%), Gaps = 0/147 (0%) Strand=Plus/Minus Query 123605 CGAAACCGGAACGCCGTACATGCTCTACAAAGACGCCTGCAACAGGAAAACCAATCAGAG 123664 ||| || |||||||| || ||||| ||||| || ||||||||| | || |||| ||| Sbjct 2121 CGAGACGGGAACGCCCTATATGCTTTACAAGGATGCCTGCAACCGCAAGTCCAACCAGCA 2062 Query 123665 CAACTTGGGAACAATAAAATGTAGTAATCTTTGCTCCGAAATTATCGAATACAGCGATGC 123724 ||||||||||| || || || || | ||| | || ||| |||| |||||| | | Sbjct 2061 AAACTTGGGAACCATTAAGTGCTCCAACTTGTGCACAGAGATTGTCGAGTACAGCAGTCC 2002 Query 123725 CGATCAAGTGGCCGTGTGTAATTTGGC 123751 ||| | ||||| ||||| || ||||| Sbjct 2001 CGACGAGGTGGCTGTGTGCAACTTGGC 1975 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 451992114621520